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1.
Yosuke Matsushita Tomio Usugi Shinya Tsuda 《European journal of plant pathology / European Foundation for Plant Pathology》2009,124(2):349-352
We characterised the host range and physical properties of Tomato chlorotic dwarf viroid. Among the 46 plant species inoculated with the viroid, two in the family Compositae and 23 in the family Solanaceae were
found to be systemic hosts. The viroids in the crude sap from diseased tomato plants were thermally inactivated by heating
to 100°C for at least 40 min. These viroids also lost their infectivity when diluted in phosphate buffer to at least 10−6, or after 3 days of incubation at room temperature. However, the infectivity of the viroids in dried crude sap from the plants
persisted throughout the 50-day test period. 相似文献
2.
Yosuke Matsushita Tomio Usugi Shinya Tsuda 《European journal of plant pathology / European Foundation for Plant Pathology》2010,128(2):165-170
We isolated eight polymorphic microsatellite markers for the basidiomycete Armillaria cepistipes and characterised them by analysing 50 isolates representing two geographically distinct populations from Switzerland and
the Ukraine. The number of alleles per locus and population varied from one to eight, resulting in 43 alleles over the eight
loci and two populations. In both populations, no significant linkage disequilibrium was observed between pairs of loci. Significant
(P < 0.05) deviations from Hardy-Weinberg equilibrium were observed at one locus in the Swiss population and at three loci in
the Ukrainian population. Of the eight loci developed for A. cepistipes, six were also polymorphic in A. gallica, four in A. ostoyae, two in A. mellea, and one in A. borealis. Beside the potential to be used for population genetic studies on A. cepistipes, these microsatellites thus represent additional molecular markers for three of the four annulated Armillaria species occurring in Europe. 相似文献
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4.
Shohei Matsuura Yosuke Matsushita Reiko Kozuka Sachiko Shimizu Shinya Tsuda 《European journal of plant pathology / European Foundation for Plant Pathology》2010,126(1):111-115
Quantitative PCR revealed that Tomato chlorotic dwarf viroid (TCDVd) was present in substantial amounts in viroid-infected tomato flowers. Healthy tomato plants were arranged in two
different glasshouses, and plants were mechanically inoculated with TCDVd. Bumblebees (Bombus ignitus) were then introduced into the glasshouses to reveal whether the viroid was transmitted from infected source plants to neighbouring
healthy plants. TCDVd infection was found in neighbouring tomato plants more than 1 month after the introduction of the bees,
some of which expressed symptoms, in both glasshouses. Thus, bumblebees transmitted TCDVd from tomato to tomato by pollination
activities. 相似文献
5.
Rudra P. Singh Andrea D. Dilworth 《European journal of plant pathology / European Foundation for Plant Pathology》2009,123(1):111-116
Two novel aspects of Tomato chlorotic dwarf viroid (TCDVd) are reported, namely that TCDVd was detected in symptomless plants of Vinca minor, a trailing ground cover surviving at subzero temperatures (−12°C); and that TCDVd was seed-borne in tomato and detected
in high percentages in tomato seeds and seedlings. Soaking seeds in a low concentration of sodium hypochlorite did not eliminate
the viroid. The sequence analysis showed that the TCDVd isolate consists of 360 nucleotides and has sequence identity between
96% to 99% with isolates of TCDVd from other hosts. 相似文献
6.
Yosuke Matsushita Tomio Usugi Shinya Tsuda 《European journal of plant pathology / European Foundation for Plant Pathology》2011,130(4):441-447
In situ hybridization was used to analyze the distribution pattern of Tomato chlorotic dwarf viroid (TCDVd) in floral organs of tomato plants. Following TCDVd invasion of floral organs, it became localized only in sepals
at an early developmental stage, then reached other floral organs at the flower opening stage, with the exception of part
of the placenta and ovules. When distribution of TCDVd was compared with that of Potato spindle tuber viroid (PSTVd), TCDVd was not detected in the outer integument around the embryo sac even though PSTVd was able to invade there,
suggesting that such specific distribution might reflect the frequent occurrence of viroid disease on crops caused by PSTVd-seed
transmission. 相似文献
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8.
Rudra P. Singh Andrea D. Dilworth Xiaoping Ao Mathuresh Singh Virendra K. Baranwal 《European journal of plant pathology / European Foundation for Plant Pathology》2009,124(4):691-694
Surveys of Impatiens and Verbena species in local nurseries in Fredericton, Canada and Verbena species in New Delhi, India showed widespread infection of Citrus exocortis viroid (CEVd) in vegetatively-propagated and seed-grown plants. To determine viroid seed transmission, samples of eight varieties
of Impatiens and 11 varieties of Verbena were obtained from four commercial sources. All 19 samples collected contained viroid infection irrespective of variety.
The presence of viroid in non-germinated seed was 21%, while the transmission rate in seedlings was 66% in Impatiens walleriana in 2006. Following 2 years of seed storage, the respective figures were 6% and 26%. Similarly, in Verbena x hybrida the presence of viroid in seed was 13% in 2006 with a seed-transmission rate in seedlings of 28%, while the respective figures
after 2 years of storage were 5% and 45%. 相似文献
9.
Taro Tsushima Sakiko Murakami Hirotsugu Ito Ying-Hong He Adkar Purushothama Charith Raj Teruo Sano 《Journal of General Plant Pathology》2011,77(4):253-256
A new variant of Potato spindle tuber viroid (PSTVd) was detected for the first time from dahlia grown in Japan. The dahlia isolate of PSTVd formed a quasi-species and
a major sequence variant consisting of 361 nucleotides in length, including five substitutions, three insertions, and one
deletion, when compared to the intermediate strain from potato. In bioassays with the new isolate, Rutgers tomato developed
mild stunting and leaf curling. 相似文献
10.
Julio C. Barbosa Sarah S. Barreto Alice K. Inoue-Nagata Marcelo S. Reis Ana Carolina Firmino Armando Bergamin Filho Jorge Alberto Marques Rezende 《Journal of General Plant Pathology》2009,75(6):440-443
Nicandra physaloides, a common weed in South America, was found to be infected by an isolate of Tomato severe rugose virus (ToSRV), a bipartite begomovirus. The plants developed severe yellow rugose mosaic and were collected in São Paulo State, Brazil. This isolate of ToSRV was transmitted by Bemisia tabaci B biotype from infected plants of N. physaloides to healthy plants of N. physaloides and tomato in a glasshouse. This is the first report of natural infection of N. physaloides by ToSRV in Brazil. 相似文献
11.
Yashika Walia Yogesh Kumar Tanuja Rana Pooja Bhardwaj Raja Ram Pritam Das Thakur Usha Sharma Vipin Hallan A. A. Zaidi 《Journal of General Plant Pathology》2009,75(4):307-311
Apple scar skin viroid (ASSVd) infection is a major limitation to apple fruit quality and causes huge economic losses. In surveys of apple orchards
in the northern Indian state of Himachal Pradesh, fruits with dappling symptoms were noticed. ASSVd was detected from these
fruits and molecularly characterized. Ten clones from three isolates were sequenced, of which seven were new sequence variants
of ASSVd. The clones had significant sequence variability (94–100%) with each other. Variability was more common in the pathogenic
domain of the viroid genome. Four of the clones were 330 nucleotides (nt) long, and the other six had an additional nucleotide.
Phylogenetic analysis showed close affinity of the present isolates with some Chinese and Korean isolates. The study reports
seven new variants of ASSVd and also provides the first molecular evidence of viroid infection (ASSVd) in apple in India. 相似文献
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13.
Barley yellow dwarf disease is one of the most important problems confronting cereal production in Iran. Barley yellow dwarf virus-PAV (BYDV-PAV) and Cereal yellow dwarf virus-RPV (CYDV-RPV) are the predominant viruses associated with the disease. One isolate of BYDV-PAV from wheat (PAV-IR) and one
isolate of CYDV-RPV from barley (RPV-IR) were selected for molecular characterisations. A genome segment of each isolate was
amplified by PCR. The PAV-IR fragment (1264 nt) covered a region containing partial genes for coat protein (CP), read through
protein (RTP) and movement protein (MP). PAV-IR showed a high sequence identity to PAV isolates from USA, France and Japan
(96–97%). In a phylogenetic analysis it was placed into PAV group I together with PAV isolates from barley and oats. The fragment
of RPV-IR (719 nt) contained partial genes for CP, RTP and MP. The sequence information confirmed its identity as CYDV. However,
RPV-IR showed 90–91% identity with both RPV and Cereal yellow dwarf virus-RPS (CYDV-RPS). Phylogenetic analyses suggested that it was more closely related to RPS. These data comprise the first attempt
to characterise BYD-causing viruses in Iran and southwest Asia.
The nucleotide sequence data reported appear in the EMBL, GenBank and DDBJ Nucleotide Sequence Databases under the accession
numbers AY450425 and AY450454 相似文献
14.
Akira Kawaguchi 《Journal of General Plant Pathology》2011,77(5):299-303
Forty-one strains of Rhizobium vitis, either tumorigenic (Ti) or nonpathogenic, were characterized using multilocus sequence analysis (MLSA) of the partial nucleotide
sequences of pyrG, recA, and rpoD. The strains separated into seven clades. Rhizobium vitis (Ti) strains isolated from Japan were divided into five genetic groups (A to E), and nonpathogenic R. vitis strains were divided into two genetic groups (F and G). This result suggests that there are new genetic groups of R. vitis in Japan. Among these groups, members of A and B groups are widely distributed throughout Japan. 相似文献
15.
Yansu Song Ni Hong Liping Wang Hongju Hu Rui Tian Wenxing Xu Fang Ding Guoping Wang 《European journal of plant pathology / European Foundation for Plant Pathology》2011,130(2):183-196
Apple chlorotic leaf spot virus (ACLSV) isolates from sand pear (Pyrus pyrifolia) were characterized by analyzing the sequences of their coat protein (CP) genes and serological reactivity of recombinant
coat proteins (rCPs). The sequences of CP genes from 22 sand pear isolates showed a high divergence, with 87.3–100% identities
at the nucleotide (nt) level and 92.7–100% identities at the amino acid (aa) level. Phylogenetic analysis on the aa sequence
of CP showed that the analyzed ACLSV isolates fell into different clusters and all isolates from sand pear were grouped into
a large cluster (I) which was then divided into two sub-clusters (A and B). Sodium dodecylsulfate-polyacrylamide gel electrophoresis
(SDS-PAGE), western blot and enzyme-linked immunosorbent assay (ELISA) analyses demonstrated that rCPs of eight ACLSV isolates
(PP13, PP15-2, PP24, PP43, PE, PP54, PP56 and ACLSV-C) from two sub-clusters had different mobility rates and serological
reactivity. The rCPs of five isolates grouped into the sub-cluster A showed stronger reactivity with antibodies against rCPs
of a sand pear isolate ACLSV-BD and virions of a Japanese apple isolate P-205 than that with the antibody against a Chinese
apple isolate ACLSV-C. Three isolates grouped into the sub-cluster B showed stronger reactivity with the antibody against
ACLSV-C. The antigenic determinants of CPs from these eight isolates and isolates ACLSV-BD and P-205 were predicted. These
results contribute to a further understanding of molecular diversity of the virus and its implication in serological detection. 相似文献
16.
17.
Masamichi Isogai Koji Ishii Seisaku Umemoto Manabu Watanabe Nobuyuki Yoshikawa 《Journal of General Plant Pathology》2009,75(2):140-143
Virus-like symptoms—red ringspots on stems and leaves, circular blotches or pale spots on fruit—were found on commercial highbush
blueberry (Vaccinium
corymbosum) cultivars Blueray, Weymouth, Duke and Sierra in Japan. In PCR testing, single DNA fragments were amplified from total nucleic
acid samples of the diseased blueberry bushes using primers specific to Blueberry red ringspot virus (BRRV). Sequencing analysis of the amplified products revealed 95.7–97.7% nucleotide sequence identity with the BRRV genome.
This paper is the first report of blueberry red ringspot disease caused by BRRV in Japan.
The nucleotide sequence data reported in this paper are available in the GenBank/EMBL/DDBJ database as accessions AB469884
to AB469893 for BRRV isolates from Japan. 相似文献
18.
From the genome of a Japanese field isolate of the rice blast fungus, Magnaporthe oryzae, we newly identified Inago1 and Inago2 LTR retrotransposons. Both elements were found to be Ty3/gypsy-like elements whose copies were dispersed within the genome of Magnaporthe spp. isolates infecting rice and other monocot plants. Southern hybridization patterns of nine re-isolates derived from conidia
of the strain Ina168 produced after a methyl viologen treatment were not changed, indicating that the insertion pattern of
Inago elements is relatively stable. 相似文献
19.
Khalid A. Hussein Mohamed A. A. Abdel-Rahman Ahmed Y. Abdel-Mallek Saad S. El-Maraghy Jin Ho Joo 《Phytoparasitica》2012,40(2):117-126
The greater wax moth Galleria mellonella L. (Lepidoptera: Pyralidae) is occasionally found in beehives and is a major pest of stored wax. Entomopathogenic fungi have
recently received attention as possible biocontrol elements for certain insect pests. In this study, 90 isolates of Beauveria bassiana and 15 isolates of Metarhizium anisopliae were screened for proteases and lipases production. The results showed significant variations in the enzymatic action between
the isolates. In the bioassay, the selected isolates evinced high virulence against the 4th instar of the G. mellonella larvae. The isolates BbaAUMC3076, BbaAUMC3263 and ManAUMC3085 realized 100% mortality at concentrations of 5.5 × 106 conidia ml−1, 5.86 × 105 conidia ml−1, and 4.8 × 106 conidia ml−1, respectively. Strong enzymatic activities in vitro did not necessarily indicate high virulence against the tested insect pest. The cuticle of the infected larvae became dark
and black-spotted, indicating direct attack of fungus on the defense system of the insects. The LC50 values were 1.43 × 103, 1.04 × 105 and 5.06 × 104 for Bba3263AUMC, Bba3076AUMC and Man3085AUMC, respectively, and their slopes were determined by computerized probit analysis
program as 0.738 ± 0.008, 0.635 ± 0.007 and 1.120 ± 0.024, respectively. 相似文献
20.
Shigemitsu Kimura Susumu Tokumaru Kazuhiko Kuge 《Journal of General Plant Pathology》2009,75(4):322-324
Yeast-like fungi were isolated from lesions on azuki bean (cv. Shin-Kyotodainagon) seeds that had been sucked by bean bugs
in Kyoto Prefecture, Japan. On the basis of morphological and physiological characteristics and sequence data of the internal
transcribed spacer (ITS) regions including the 5.8S rDNA, these yeasts were identified as Eremothecium coryli and E. ashbyi. Pathogenicity of those yeasts was confirmed by a reinoculation test. To our knowledge, this is the first report of the occurrence
of yeast spot in azuki bean in Japan.
The nucleotide sequence data reported are available in the GeneBank/EMBL/DDBJ database as accessions AB478291–AB478309 for
E. coryli AZC1–19 and AB478310–AB478317 for E. ashbyi AZA1–8. 相似文献