Quantitative trait loci for resistance to fusarium head blight and deoxynivalenol accumulation in Wangshuibai wheat under field conditions

Wangshuibai is a Chinese landrace wheat with a high level of resistance to fusarium head blight (FHB) and deoxynivalenol (DON) accumulation. Using an F7 population of recombinant inbred lines (RILs) derived from the cross between Wangshuibai and Annong 8455 for molecular mapping of quantitative trait loci (QTL) for FHB resistance, the proportion of scabbed spikelets (PSS) and DON content were assessed under field conditions. Composite interval mapping revealed that two and three QTL were significantly associated with low PSS and low DON content, respectively, over 2 years. QTL on chromosomes 3B and 2A explained 17 and 11·5%, respectively, of the phenotypic variance for low PSS, whereas QTL on chromosomes 5A, 2A and 3B explained 12·4, 8·5 and 6·2%, respectively, of the phenotypic variance for low DON content. The 3B QTL appeared to be associated mainly with low PSS, and the 5A QTL primarily with low DON content in Wangshuibai. The 2A QTL had minor effects on both low PSS and DON content. Microsatellite and AFLP markers linked to these QTL should be useful for marker-assisted selection of QTL for low PSS and low DNA content from Wangshuibai.     

Host genetic effect on deoxynivalenol accumulation in fusarium head blight of barley

ABSTRACT One of the major concerns with Fusarium head blight (FHB) of barley is the potential health risks to livestock and humans through the accumulation of the mycotoxin deoxynivalenol (DON) in infected grain. To define the role of the host in DON accumulation during the early stages of disease development, we conducted a series of greenhouse experiments. We inoculated single spikelets of greenhouse-grown plants with Fusarium graminearum, moved the plants to a dew chamber, and harvested the inoculated spikelets after 72 h for DON analysis. We conducted a quantitative trait locus (QTL) analysis using a genetic mapping population, constructed with the parents Stander and Frederickson, that segregated for DON accumulation after single-spikelet inoculation in two experiments. A single QTL on chromosome 3 explained 18 and 35% of the phenotypic variation in the two experiments. To validate this QTL for DON accumulation, we used a DNA marker to select near-isogenic lines from a family from the mapping population that was segregating at this QTL. Disease symptom development was similar between the nearisogenic lines; however, the mean DON concentration of the lines homozygous for the allele from the high DON parent was 2.5-fold more than the lines homozygous for the alternate allele. A time course experiment showed that this effect on toxin accumulation was observed at 10 days post inoculation. The near-isogenic lines developed in this study should prove useful for further exploration of the role of DON in FHB.     

Quantitative trait loci for Fusarium head blight resistance in a recombinant inbred population of Wangshuibai/Wheaton

Use of diverse sources of Fusarium head blight (FHB)-resistant germplasm in breeding may significantly improve wheat resistance to FHB. Wangshuibai is an FHB-resistant Chinese landrace unrelated to cv. Sumai 3, the most commonly used FHB-resistant source. In all, 139 F(6) recombinant inbred lines were developed from a cross between Wangshuibai and an FHB-susceptible cultivar, Wheaton, to map quantitative trait loci (QTL) for wheat resistance to initial infection (type I resistance), spread of FHB symptoms within a spike (type II resistance), and deoxynivalenol (DON) accumulation (type III resistance) in infected grain. The experiments were conducted in a greenhouse at Manhattan, KS from 2003 to 2005. More than 1,300 simple-sequence repeat and amplified fragment length polymorphism markers were analyzed in this population. Five QTL for type I resistance were detected on chromosomes 3AS, 3BS, 4B, 5AS, and 5DL after spray inoculation; seven QTL for type II resistance were identified on chromosomes 1A, 3BS, 3DL, 5AS, 5DL, and 7AL after point inoculation; and seven QTL for type III resistance were detected on chromosomes 1A, 1BL, 3BS, 5AS, 5DL, and 7AL with the data from both inoculation methods. These QTL jointly explained up to 31.7, 64, and 52.8% of the phenotypic variation for the three types of FHB resistance, respectively. The narrow-sense heritabilities were low for type I resistance (0.37 to 0.41) but moderately high for type II resistance (0.45 to 0.61) and type III resistance (0.44 to 0.67). The QTL on the distal end of 3BS, 5AS, and 5DL contributed to all three types of resistance. Two QTL, on 7AL and 1A, as well as one QTL near the centromere of 3BS (3BSc), showed effects on both type II and type III resistance. Selection for type II resistance may simultaneously improve type I and type III resistance as well. The QTL for FHB resistance identified in Wangshuibai have potential to be used to pyramid FHB-resistance QTL from different sources.     

栽培大麦×纤毛鹅观草属间杂种后代系抗赤霉病研究

本文研究了栽培大麦×纤毛鹅观草属间杂种后代６０ 个系群及其亲本在接菌条件下的抗赤霉病表现。从每穗发病百分率、发病动态进程和穗轴病变率等多个侧面对属间杂种后代系的抗性进行了分析。结果表明：１发病百分率：参试各系未出现高抗（小穗受害率＜ ３９３％ ）和高感（小穗受害率＞ ５７３％ ）的类型。后代系属Ｒ 级（抗病）的共７ 系,占１１７％ ;属ＭＲ 级（中抗）的共２５ 系,占４１７％ ;其余２８ 系属Ｍ Ｓ级（中感）和Ｓ级（感染）,占４６７％ 。当按病情指数来划分时,则Ｒ 级和ＭＲ 级所占比例更大。２变动系数：属抗病级的各系,在接菌后第８ ｄ 的第一次调查中,基本上未发病,以后各期的变动系数均小;属感病级的各系,第一次调查时感病就重,以后各期的变动系数也高。３属抗病的各系,穗轴节的病变最轻,感病各系较重,大麦亲本最重。此外,还讨论了作物对赤霉病抗性的机理、抗性级别划分标准和属间基因转移等问题。     

栽培大麦×纤毛鹅观草属间杂种后代系抗赤霉病研究

 本文研究了栽培大麦×纤毛鹅观草属间杂种后代60个系群及其亲本在接菌条件下的抗赤霉病表现。从每穗发病百分率、发病动态进程和穗轴病变率等多个侧面对属间杂种后代系的抗性进行了分析。结果表明:1.发病百分率:参试各系未出现高抗(小穗受害率< 3.93%)和高感(小穗受害率> 57.3%)的类型。后代系属R级(抗病)的共7系,占11.7%;属MR级(中抗)的共25系,占41.7%;其余28系属MS级(中感)和S级(感染),占46.7%。当按病情指数来划分时,则R级和MR级所占比例更大。2.变动系数:属抗病级的各系,在接菌后第8 d的第一次调查中,基本上未发病,以后各期的变动系数均小;属感病级的各系,第一次调查时感病就重,以后各期的变动系数也高。3.属抗病的各系,穗轴节的病变最轻,感病各系较重,大麦亲本最重。此外,还讨论了作物对赤霉病抗性的机理、抗性级别划分标准和属间基因转移等问题。     

大麦赤霉病鉴定方法与抗性评价

为探讨以病小穗率与病穗率作为抗性评价指标的精确度,利用单花滴注、孢子液喷雾分别结合土表病麦粒接种的方法,评价了2个大麦重组自交系群体131个株系对赤霉病的抗侵染与抗扩展性。单花滴注接种后调查了第7、14和21天的病情性状,接种后第7天所有株系均感病,病小穗率最低的为1.59%,第21天最高病小穗率为58.91%;孢子液喷雾接种后第21天材料全部感病,其中6棱株系的感病程度高于2棱株系。以病小穗率和病穗率划分赤霉病抗性的分布情况,发现病小穗率更能有效区分株系的赤霉病抗性。相关分析显示,病小穗率、病穗率、禾谷镰刀菌烯醇含量与粒色和穗密度呈显著负相关,而与株高、抽穗期无显著相关。     

不同小麦品种抗赤霉病性类型和抗毒素积累能力分析

赤霉病是我国小麦上的重要病害,品种抗病性利用是控制病害发生的重要措施,明确小麦抗赤霉病资源的抗性类型,有利于小麦抗赤霉病育种。2003年和2004年对9个常用抗源在穗期进行单花滴注和喷雾接种,研究其抗侵染和抗扩展性,并对病穗中的脱氧雪腐镰刀菌烯醇(DON)的含量进行分析。结果表明,望水白和苏麦3号具较好的抗侵染和抗扩展能力,其中望水白的抗扩展性最好;感染赤霉病后,DON在5个抗源穗组织中的含量差异显著,DON在望水白和繁60096穗组织中积累量明显比在苏麦3号、延岗坊主和翻山小麦低。通过对望水白/安农8455遗传群体两年的病小穗率和病穗中DON毒素含量的比较,发现二者具有一定的相关性,且受环境影响比较大。     

Quantitative trait loci for seedling and adult plant resistance to Stagonospora nodorum in wheat

Stagonospora nodorum blotch (SNB) caused by Stagonospora nodorum is a severe disease of wheat (Triticum aestivum) in many areas of the world. S. nodorum affects both seedling and adult plants causing necrosis of leaf and glume tissue, inhibiting photosynthetic capabilities, and reducing grain yield. The aims of this study were to evaluate disease response of 280 doubled haploid (DH) individuals derived from a cross between resistant (6HRWSN125) and susceptible (WAWHT2074) genotypes, compare quantitative trait loci (QTL) for seedling and adult plant resistance in two consecutive years, and assess the contribution of QTL on grain weight. Flag leaves and glumes of individuals from the DH population were inoculated with mixed isolates of S. nodorum at similar maturity time to provide accurate disease evaluation independent of morphological traits and identify true resistance for QTL analysis. Fungicide protected and inoculated plots were used to measure relative grain weight (RGW) as a yield-related trait under pathogen infection. The lack of similar QTL and little or no correlation in disease scores indicate different genes control seedling and adult plant disease and independent genes control flag leaf and glume resistance. This study consistently identified a QTL on chromosome 2DL for flag leaf resistance (QSnl.daw-2D) and 4BL for glume resistance (QSng.daw-4B) from the resistant parent, 6HRWSN125, explaining 4 to 19% of the phenotypic variation at each locus. A total of 5 QTL for RGW were consistently detected, where two were in the same marker interval for QSnl.daw-2D and QSng.daw-4B indicating the contribution of these QTL to yield related traits. Therefore, RGW measurement in QTL analysis could be used as a reliable indicator of grain yield affected by S. nodorum infection.     

Identification of quantitative trait Loci for resistance to southern leaf blight and days to anthesis in two maize recombinant inbred line populations

The genetic architecture underlying resistance in maize to southern leaf blight (SLB) caused by Cochliobolus heterostrophus race O is not well understood. The objective of this study was to identify loci contributing to SLB resistance in two recombinant inbred line populations and to compare these to SLB resistance loci in other populations. The two populations used were derived from crosses between maize inbred lines H99 and B73 (HB population-142 lines) and between B73 and B52 (BB population-186 lines). They were evaluated for SLB resistance and for days from planting to anthesis (DTA) in 2005 and 2006. Two replications arranged as randomized complete blocks were assessed in each year for each population. Entry mean heritabilities for disease resistance were high for both populations (0.876 and 0.761, respectively). Quantitative trait loci (QTL) for SLB resistance were identified in bins 3.04 (two QTL), 6.01, and 8.05 in the HB population and in bin 2.07 in the BB population. No overlap of DTA and SLB resistance QTL was observed, nor was there any phenotypic correlation between the traits. A comparison of the results of all published SLB resistance QTL studies suggested that bins 3.04 and 6.01 are 'hotspots' for SLB resistance QTL.     

Relationship between cultivar height and severity of Fusarium ear blight in wheat

A significant negative relationship between tiller height and resistance to Fusarium ear blight (FEB), following inoculation, was observed in 17 cultivars of winter wheat in the 1995/96 growing season. Tall cultivars such as Kraka and Spark showed fewer symptoms of FEB (6 and 4%) than the shorter cultivars Brigadier and Virtue (35 and 51%). To determine if this relationship was caused by a genetic association or an effect of the microclimate, height and disease were measured in segregating populations derived from tall × short cultivars and humidity was measured in near-isogenic lines with and without the Rht1 and Rht2 dwarfing genes. Among random F₃ populations there was a clear tendency for tall strawed lines to show less severe disease symptoms than shorter strawed lines following inoculation. The effect of the individual dwarfing genes Rht1 and Rht2 on the severity of FEB was also studied in an inoculation trial using a number of near-isogenic lines of Maris Huntsman and Maris Widgeon. Within isogenic lines of Maris Huntsman, there was a clear tendency for tall straw to be associated with fewer symptoms, but this was not apparent within lines of Maris Widgeon. Monitoring relative humidity at ear height in a short and tall isogenic line of Maris Huntsman revealed no significant differences between these genotypes from GS 65 to GS 85, suggesting that microclimate cannot explain differences in severity of FEB between these lines. It is suggested that there are independent genes affecting the severity of FEB that may allow plant breeders to select resistant cultivars of any height.     

Genetic relationships among Chickpea (<Emphasis Type="Italic">Cicer arietinum</Emphasis> L<Emphasis Type="Italic">.</Emphasis>) genotypes based on the SSRs at the quantitative trait Loci for resistance to Ascochyta Blight

Breeding for resistance to ascochyta blight in chickpea has been challenged by several factors including the limited sources of good resistance. Characterization of a set of genotypes that may contain different genes for resistance may help breeders to develop better and more durable resistance compared to current cultivars. The objective of this study was to evaluate the genetic relationships of 37 chickpea germplasm accessions differing in reaction to ascochyta blight using Simple Sequence Repeat (SSR) markers linked to Quantitative Trait Loci (QTL) for resistance. The results demonstrated that ILC72 and ILC3279, landraces from the former Soviet Union, had SSR alleles that were common among the kabuli breeding lines and cultivars. A lower SSR allele diversity was found on LG4 than on other regions. No correlation was found between the dendrogram derived using SSRs at the QTL regions and the SSRs derived from other parts of the genome. The clustering based on 127 alleles of 17 SSRs associated with the QTL for ascochyta blight resistance enabled us to differentiate three major groups within the current germplasm accessions. The first group was the desi germplasm originating from India and cultivars derived from it. The second group was a mix of desi genotypes originating from India and Greece, and kabuli breeding lines from ICARDA and the University of Saskatchewan. The third and largest group consisted of landraces originating mostly from the former Soviet Union and breeding lines/cultivars of the kabuli type. Several moderately resistance genotypes that are distantly related were identified. Disease evaluation on three test populations suggested that it is possible to enhance the level of resistance by crossing moderately resistant parents with distinct genetic backgrounds at the QTL for resistance to ascochyta blight.     

Evaluation of bacterial wilt resistance in tomato lines nearly isogenic for the Mi gene for resistance to root-knot

Resistance to bacterial wilt, caused by Ralstonia solanacearum , in tomato lines CRA 66 and Caraïbo is reported to be decreased by root-knot nematode galling and by introduction of the Mi gene for nematode resistance. The Mi gene is located on tomato chromosome 6, which also carries a major quantitative trait locus (QTL) for resistance to bacterial wilt. Bacterial wilt resistance was evaluated in F3-progenies derived from two crosses between near-isogenic lines, Caraïbo × Carmido and CRA 66 × Cranita, differing for small and large introgressions from Lycopersicon peruvianum that carry the Mi gene, respectively. These introgressed regions were mapped using RFLP markers. Plants homozygous Mi⁺/Mi⁺ (susceptible to the nematode) and homozygous Mi/Mi (resistant) for the Mi gene were selected in F2 and used to produce F3 progenies. Parents and F3-lines with Mi/Mi had resistance to bacterial wilt reduced by 30% in Caraïbo × Carmido and by 15% in CRA 66 × Cranita. Caraïbo and Carmido were demonstrated to be isolines and the small introgression from L. peruvianum resulted in loss of the QTL for bacterial wilt resistance, which is probably allelic or linked in repulsion to the Mi gene. In contrast, resistance to bacterial wilt segregated in the F3 lines from the cross CRA 66 × Cranita, giving families varying in resistance between the levels shown by the parents. Consequently, two hypotheses were considered: (i) after only four backcrosses, the parents were not isolines and the genes for resistance to bacterial wilt from CRA 66 were still segregating, and (ii) the parents were isolines and variation in resistance to bacterial wilt in F3 was due to recombination events among the large L. peruvianum introgressed chromosome region from Cranita.     

Quantitative Trait Loci Analysis and Mapping of Seedling Resistance to Stagonospora nodorum Leaf Blotch in Wheat

ABSTRACT Stagonospora nodorum leaf blotch is an economically important foliar disease in the major wheat-growing areas of the world. In related work, we identified a host-selective toxin (HST) produced by the S. nodorum isolate Sn2000 and determined the chromosomal location of the host gene (Snn1) conditioning sensitivity to the toxin using the International Triticeae Mapping Initiative mapping population and cytogenetic stocks. In this study, we used the same plant materials to identify quantitative trait loci (QTL) associated with resistance to fungal inoculations of Sn2000 and investigate the role of the toxin in causing disease. Disease reactions were scored at 5, 7, and 10 days postinoculation to evaluate changes in the degree of effectiveness of individual QTL. A major QTL was identified on the short arm of chromosome 1B, which coincided with the snn1 toxin-insensitivity gene. This locus explained 58% of the phenotypic variation for the 5-day reading but decreased to 27% for the 10-day reading, indicating that the toxin is most effective in the early stages of the interaction. In addition, relatively minor QTL were identified on chromosomes 3AS, 3DL, 4AL, 4BL, 5DL, 6AL, and 7BL, but not all minor QTL were significant for all readings and their effects varied. Multiple regression models explained from 68% of the phenotypic variation for the 5-day reading to 36% for the 10-day reading. The Chinese Spring nullisomic 1B tetrasomic 1D line and the Chinese Spring-Triticum dicoccoides disomic 1B chromosome substitution line, which were insensitive to SnTox1, were more resistant to the fungus than the rest of the nullisomictetrasomic and disomic chromosome substitution lines. Our results indicate that the toxin produced by isolate Sn2000 is a major virulence factor.     

Locating quantitative trait loci associated with Orobanche crenata resistance in pea

Orobanche crenata (broomrape) is a root parasite that represents the major constraint for pea (Pisum sativum) cultivation in the Mediterranean area and the Middle East. The efficacy of available control methods is minimal and breeding for O. crenata resistance is considered the most promising strategy of control. Only moderate levels of incomplete resistance are available in pea germplasm. In order to identify and map the quantitative trait loci (QTL) controlling the trait, 115 F₂ plants derived from the cross between a susceptible and a resistant parent were analysed using isozymes, random amplified polymorphic DNA and sequence tagged site markers. F₂‐derived F₃ lines were studied for O. crenata resistance under field conditions. The linkage map was constructed with MAPMAKER V2.0. Of 217 markers, 120 could be mapped into 21 linkage groups. Linkage groups consisted of 13 to two marker loci covering 1770 cM. The mean inter‐marker distance was 17.64 cM. Simple interval mapping (SIM) and composite interval mapping (CIM) were performed using QTL Cartographer. The CIM approach using five cofactors was clearly the most efficient way to locate putative QTL. Two QTL for O. crenata resistance (Ocp1 and Ocp2), explaining only a moderate portion of the observed variation (9.6% and 11.4% respectively), were detected.     

Histopathology provides a phenotype by which to characterize stripe rust resistance genes in wheat

The expression of the resistance phenotypes of QPst.jic‐2D and QPst.jic‐4B, two quantitative trait loci (QTL) for stripe rust resistance in wheat cv. Alcedo, were assessed relative to plant growth stage, while a histopathology analysis was undertaken to characterize the cellular interaction between Puccinia striiformis f. sp. tritici (the causal agent of stripe rust) and each QTL. QPst.jic‐2D expressed a partial resistant phenotype at seedling growth stages, with the level of resistance increasing as the wheat plant matured, conferring a disease‐free phenotype at heading. QPst.jic‐4B, however, did not express a resistant phenotype until booting (growth stage 41 on the Zadoks scale), displaying its full resistant phenotype at heading. Microscopic examination in flag leaves showed that infection sites formed in all genotypes tested, with full infection‐site establishment being observed by 36 h post‐inoculation (hpi). In lines carrying both QPst.jic‐2D and QPst.jic‐4B, as well as the parental cv. Alcedo, no microcolony formation, defined by the appearance of runner hyphae, was observed. Microcolony formation was observed in lines carrying only one, or neither QTL. Cell death associated with infection sites was observed for all genotypes, although the timing of first appearance and the extent of the cell death response varied considerably. In lines carrying both QPst.jic‐2D and QPst.jic‐4B cell death did not extend beyond one to three cells. In lines carrying only one QTL more extensive cell death was observed and cell death appeared later in lines with QPst.jic‐4B than QPst.jic‐2D. Cell death was also occasionally observed in lines without either QTL, although only at 264 hpi.     

Quantitative trait loci associated with isolate specific and isolate nonspecific partial resistance to Phoma macdonaldii in sunflower

Black stem, caused by Phoma macdonaldii , is one of the most important diseases of sunflower in the world. Quantitative trait loci (QTLs) implicated in partial resistance to two single pycnidiospore isolates of P. macdonaldii (MP8 and MP10) were investigated using 99 recombinant inbred lines (RILs) from the cross between sunflower parental lines PAC2 and RHA266. The experimental design was a randomized complete block with three replications. High genetic variability and transgressive segregation were observed among RILs for partial resistance to P. macdonaldii isolates. QTL-mapping was performed using a recently developed high-density SSR/AFLP sunflower linkage map. A total of 10 QTLs were detected for black stem resistance. The phenotypic variance explained by each QTL (R²) was moderate, ranging from 6 to 20%. Four QTLs were common between two isolates on linkage group 5 and 15 whereas the others were specific for each isolate. Regarding isolate-specific and isolate-nonspecific QTLs detected for partial resistance, it is evident that both genetic effects control partial resistance to the disease isolates. This confirms the need to consider different isolates in the black stem resistance breeding programmes. The four SSR markers HA3700, SSU25, ORS1097 and ORS523_1 encompassing the QTLs for partial resistance to black stem isolates could be good candidates for marker assisted selection.     

Pyramiding of partial disease resistance genes has a predictable,but diminishing,benefit to efficacy

Partial resistance genes often need to be ‘pyramided’ into a crop cultivar to obtain commercially acceptable levels of disease resistance. Analysis of data from four different wheat mapping populations, segregating for partial resistance to four contrasting foliar pathogens, showed a diminishing benefit to disease control from increasing the numbers of resistance loci in wheat lines. To test whether a general function could describe the efficacy benefit from pyramiding, a simple multiplicative survival model (MSM) was used to predict disease severities on mapping population lines carrying various combinations of two, three or four resistance loci. The effectiveness of each resistance locus was expressed as the disease severity in lines carrying resistance alleles at one locus, as a proportion of the severity in lines carrying no detectable resistance alleles. The predicted severity from any given combination of multiple resistance loci was calculated as the product of the proportional severities for the relevant single loci. A regression line fitted to transformed observed against predicted values explained 93% of the variation, with a slope and intercept not significantly different from 1 and 0, respectively. MSM may therefore provide a simple method to test contrasting types of partial resistance and search for synergistic combinations. The analysis suggests that diminishing returns are a general feature of partial resistance to foliar pathogens in wheat, a finding that is likely to apply to other crop pathosystems. Identifying and combining ever more QTL is likely to provide limited gains. The consequences of these findings for QTL analysis are described.     

Selection for quantitative trait loci associated with resistance to Stewart's wilt in sweet corn

The objectives of this research were to identify quantitative trait loci (QTL) for Stewart's wilt resistance from a mapping population derived from a sweet corn hybrid that is highly resistant to Pantoea stewartii and to determine if marker-based selection for those QTL could substantially improve Stewart's wilt resistance in a population derived from a cross of resistant lines and a highly susceptible sweet corn inbred. Three significant QTL for Stewart's wilt resistance on chromosomes 2 (bin 2.03), 5 (bin 5.03), and 6 (bin 6.06/6.07) explained 31% of the genetic variance in a population of 110 F(3:4) families derived from the sweet corn hybrid Bonus. The three QTL appeared to be additive in their effects on Stewart's wilt ratings. Based on means of families that were either homozygous or heterozygous for marker alleles associated with the resistance QTL, the QTL on chromosomes 2 and 6 appeared to have dominant or partially dominant gene action, while the QTL on chromosome 5 appeared to be recessive. A population of 422 BC(2)S(2) families was derived from crosses of a sweet corn inbred highly susceptible to Stewart's wilt, Green Giant Code 88 (GG88), and plants from two F(3:4) families (12465 and 12467) from the Bonus mapping population that were homozygous for marker alleles associated with Stewart's wilt resistance at the three QTL. Mean Stewart's wilt ratings for BC(2)S(2) families were significantly (P < 0.05) lower for families that were homozygous for the bnlg1902 marker allele (bin 5.03) from resistant lines 12465 or 12467 than for families that were heterozygous at this marker locus or homozygous for the bnlg1902 marker allele from GG88. Resistance associated with this QTL was expressed only if F(3:5) or BC(2)S(2) families were homozygous for marker alleles associated with the resistant inbred parent (P(1)). Marker alleles identified in the F(3:5) mapping population that were in proximity to the resistance QTL on chromosomes 2 and 6 were not polymorphic in crosses of GG88 with 12465 and 12467. Selection for other polymorphic marker loci adjacent to these two regions did not improve Stewart's wilt resistance of BC(2)S(2) families.     

Comparative Quantitative Trait Loci Mapping of Partial Resistance to Puccinia sorghi Across Four Populations of European Flint Maize

ABSTRACT We mapped and characterized quantitative trait loci (QTL) for partial resistance to Puccinia sorghi and investigated consistency across different European flint maize populations. Four independent populations, containing 280 F(3) lines (AxB(I)), 120 F(5) lines (AxB(II)), 131 F(4) lines (AxC), and 133 F(4) lines (CxD) were produced from four European elite flint inbreds (A, B, C, and D) and genotyped at 89, 151, 104, and 122 restriction fragment length polymorphism marker loci, respectively. All F(n) lines were evaluated in field trials with two replications in three or five (AxB(I)) environments. Genotypic variance was highly significant for rust ratings in all populations, and heritabilities exceeded 0.64. Between 4 and 13 QTL were detected in individual populations using composite interval mapping, explaining between 33 and 71% of the phenotypic variance. Twenty QTL were distributed over all ten chromosomes, without preference to chromosomes 3, 4, 6, and 10, which harbor qualitatively acting Rp loci. In most cases, gene action was additive or partially dominant. Four pairs of QTL displayed significant digenic epistatic interactions, and QTL-environment interactions were observed frequently. Approximately half of the QTL were consistent between AxB(I) and AxB(II) or AxC and CxD; fewer were consistent between AxB(I) and AxC or CxD. In European flint maize germ plasm, conventional selection for partial rust resistance seems to be more promising than marker-assisted selection.     

Identification of quantitative trait loci for resistance against Verticillium longisporum in oilseed rape (Brassica napus)

Verticillium longisporum is one of the major pathogens of oilseed rape (Brassica napus; genome AACC, 2n = 38) in Europe. Current European cultivars possess only a low level of resistance against V. longisporum, meaning that heavy infection can cause major yield losses. The aim of this study was to identify quantitative trait loci (QTL) for resistance against V. longisporum as a starting point for marker-assisted breeding of resistant cultivars. Resistance QTL were localized in a segregating oilseed rape population of 163 doubled haploid (DH) lines derived by microspore culture from the F1 of a cross between two B. napus breeding lines, one of which exhibited V. longisporum resistance derived by pedigree selection from a resynthesized B. napus genotype. A genetic map was constructed comprising 165 restriction fragment length polymorphism, 94 amplified fragment length polymorphism and 45 simple sequence repeats (SSR) markers covering a total of 1,739 cM on 19 linkage groups. Seedlings of the DH lines and parents were inoculated with V. longisporum isolates in four greenhouse experiments performed in Sweden during autumn 1999. In three of the experiments the DH lines were inoculated with a mixture of five isolates, while in the fourth experiment only one of the isolates was used. The intention was to simulate four different environments with variable disease pressure, while still maintaining uniform conditions in each environment to enable reliable disease scoring. The disease index (DI) was calculated by scoring symptoms on a total of 21 inoculated plants per line in comparison to 21 noninoculated plants per line. Using the composite interval mapping procedure a total of four different chromosome regions could be identified that showed significant QTL for resistance in more than one environment. Two major QTL regions were identified on the C-genome linkage groups N14 and N15, respectively; each of these QTL consistently exhibited significant effects on resistance in multiple environments. The presence of flanking markers for the respective QTL was associated with a significant reduction in DI in the inoculated DH lines.