Economic weights of production and functional traits for Holstein‐Friesian cattle in Hungary

A bio‐economic model was used to estimate economic values of 15 milk production, functional, growth and carcass traits for Hungarian Holstein‐Friesian cattle. The calculations were carried out for the situation in Hungary from 2000 to 2007, assuming no production quotas. The marginal economic values were defined as partial derivatives of the profit function with respect to each trait in a production system with dairy cow herds and with sales of surplus male calves. The economic weights for maternal and direct components of traits were calculated multiplying the marginal economic values by the number of discounted expression summed over a 25‐year investment period for 2‐year‐old bulls (candidates for selection). The standardized economic weight (economic weight × genetic standard deviation) of the trait or trait component expressed as percentage of the sum of the standardized economic weights for all traits and trait components represented the relative economic importance of this trait or trait component. The highest relative economic importance was obtained for milk yield (25%), followed by productive lifetime of cows (23%), protein yield and the direct component of a cow’s total conception rate (9% each), the maternal effect of the total conception rate of cows and the somatic cell score (approximately 7% each), fat yield (5%) and mature weight of cows and daily gain in rearing of calves (approximately 4% each). Other functional traits (clinical mastitis incidence, calving difficulty score, total conception rate of heifers and calf mortality) reached a relative economic importance between 0.5% and 2%. Birth weight and dressing percentage were least important (<0.5%). Based on these results, the inclusion of productive lifetime and cow fertility in the breeding programme for Holstein‐Friesian cattle in Hungary is advisable.     

Effect of polymorphisms at the STAT5A and FGF2 gene loci on reproduction, milk yield and lameness of Holstein cows

The objective of this study was to investigate the association of polymorphisms at the STAT5A and FGF2 gene loci with fertility, lactation milk yield and lameness in dairy cattle. Five hundred and eighteen primiparous Holstein cows were included in the study. Several reproductive traits were considered including conception rate (0/1) at first insemination, conception rate (0/1) in a 305-day lactation, number of inseminations per conception, interval (days) from calving to conception for cows that conceived in the first 305 days of lactation and age at first calving. Milk yield and lameness incidence were also recorded. Genotyping was performed using PCR-RFLP. The effect of allele substitution at each gene locus on reproductive traits, milk yield and lameness was assessed with single-trait mixed linear models. No significant associations were found between reproduction traits and any of the studied polymorphisms, apart from age at first calving, for which STAT5A polymorphism had a suggestive effect (P = 0.077). In addition, no significant effect of any polymorphism on lameness was found. Replacement of the C by G allele at the STAT5A locus was associated with a significant (P < 0.05) increase in lactation milk yield, suggesting that this locus could be considered in gene assisted selection for the genetic improvement of milk production.     

Crossbreeding effects on milk yield traits and calving interval in spring‐calving dairy cows

The aim of the study was to assess crossbreeding effects for 305‐day milk, fat, and protein yield and calving interval (CI) in Irish dairy cows (parities 1 to 5) calving in the spring from 2002 to 2006. Data included 188 927 records for production traits and 157 117 records for CI. The proportion of genes from North American Holstein Friesian (HO), Friesian (FR), Jersey (JE) and Montbéliarde (MO) breeds, and coefficients of expected heterosis for HO×FR, HO×JE and HO×MO crosses were calculated from the breed composition of cows’ parents. The model used to assess crossbreeding effects accounted for contemporary group, age at calving within parity, linear regression on gene proportions for FR, JE and MO, and linear regression on coefficients of expected heterosis for HO×FR, HO×JE and HO×MO, as fixed effects, and additive genetic, permanent environmental and residual as random. Breed effects for production traits were in favour of HO, while for CI were in favour of breeds other than HO. The highest heterosis estimates for production were for HO×JE, with first‐generation crosses yielding 477 kg more milk, 25.3 kg more fat, and 17.4 kg more protein than the average of the parental breeds. The highest estimate for CI was for HO×MO, with first‐generation crosses showing 10.2 days less CI than the average of the parental breeds. Results from this study indicate breed differences and specific heterosis effects for milk yield traits and fertility exist in Irish dairy population.     

Genetics of milk yield and fertility traits in Holstein-Friesian cattle on large-scale Kenyan farms

Purebred Holstein-Friesian cows are the main exotic breed used for milk production on large, medium, and small farms in Kenya. A study was undertaken on seven large-scale farms to investigate the genetic trends for milk production and fertility traits between 1986 and 1997 and the genetic relationships between the traits. This involved 3,185 records from 1,614 cows, the daughters of 253 sires. There was a positive trend in breeding value for 305-d milk yield of 12.9 kg/ yr and a drop in calving interval of 0.9 d/yr over the 11-yr period. Bulls from the United States (U.S.) had an average total milk yield breeding value 230 kg higher than the mean of all bulls used; Canada (+121 kg), Holland (+15 kg), the United Kingdom (U.K., 0 kg), and Kenya (-71 kg) were the other major suppliers of bulls. Average breeding values of bulls for calving interval by country of origin were -1.31 (Canada), -1.27 (Holland), -0.83 (U.S.), -0.63 (Kenya), and 0.68 d (U.K.). The genetic parameters for 305-d milk yield were 0.29 (heritability), 0.05 (permanent environment effect as proportion of phenotypic variance) resulting in an estimated repeatability of 0.34. Using complete lactation data rather than 305-d milk yield resulted in similar estimates of the genetic parameters. However, when lactation length was used as a covariate heritability was reduced to 0.25 and the permanent environment effect proportion increased to 0.09. There was little genetic control of either lactation length (heritability, 0.09) or calving interval (heritability, 0.05); however, there were strong genetic correlations between first lactation milk yield, calving interval, and age at first calving.     

Breed and crossbreeding effects in a crossing experiment between dutch friesian and holstein friesian cattle

In the second generation of a crossbreeding experiment with Holstein Friesian bulls and Dutch Friesian cows the difference in additive genetic merits between Holstein Friesian and Dutch Friesian bulls (a), the heterotic effects (d) and the maternal effects (m) were calculated from the mean values of the four subpopulations with 0%, 25%, 50% and 75% Holstein Friesian genes. Significant a effects were found for milk yield, fat percentage, fat yield, protein yield, fleshiness (beef bulls and veal calves), fat covering (beef bulls), dressing percentage (veal calves), birth weight, percentage of calving difficulties and gestation period. A significant d effect was found for fat covering (beef bulls). For dressing percentage (veal calves), for the percentage of calving difficulties and of retained placenta, significant m effects were calculated.     

Fine mapping of a calving QTL on Bos taurus autosome 18 in Holstein cattle

Decreased calving performance not only directly impacts the economic efficiency of dairy cattle farming but also influences public concern for animal welfare. Previous studies have revealed a QTL on Bos taurus autosome (BTA) 18 that has a large effect on calving traits in Holstein cattle. In this study, fine mapping of this QTL was performed using imputed high‐density SNP chip (HD) genotypes followed by imputed next‐generation sequencing (NGS) variants. BTA18 was scanned for seven direct calving traits in 6113 bulls with imputed HD genotypes. SNP rs136283363 (BTA18: 57 548 213) was consistently the most significantly associated SNP across all seven traits [e.g. p‐value = 2.04 × 10^?59 for birth index (BI)]. To finely map the QTL region and to explore pleiotropic effects, we studied NGS variants within the targeted region (BTA18: 57 321 450–57 625 355) for associations with direct calving traits and with three conformation traits. Significant variants were prioritized, and their biological relevance to the traits was interpreted. Considering their functional relationships with direct calving traits, SIGLEC12, CD33 and CEACAM18 were proposed as candidate genes. In addition, pleiotropic effects of this QTL region on direct calving traits and conformation traits were observed. However, the extent of linkage disequilibrium combined with the lack of complete annotation and potential errors in the Bos taurus genome assembly hampered our efforts to pinpoint the causal mutation.     

Polymorphism of the beta-casein gene and its associations with breeding value for production traits of Holstein–Friesian bulls

Beta-casein A1 protein variant might be one of the risk factors in the etiology of human disorders like diabetes and ischemic heart disease. However, from the practical perspective selecting for the A2 allele in dairy cattle requires knowledge of whether the A1/A2 polymorphism is associated with breeding values for production traits. A DNA fragment containing A1/A2 polymorphic region was amplified and genotyped using the PCR-ACRS (Amplification Created Restriction Site) technique in 478 Holstein–Friesian bulls yielding the allele frequencies of 0.35 and 0.65 for the A1 and the A2 variants, respectively. A linear regression model was used for testing the association between the polymorphism and breeding values for production traits and showed that the allele coding the A2 protein variant increases breeding values for milk and protein yield and decreases breeding values for fat percentage in milk. Genotyping A.I. bulls at beta-casein locus and preferring A2 allele may lead to two benefits: increasing breeding value for protein yield and decreasing frequency of A1 protein variant, being considered as risk factor for human health.     

Differential promoter methylation of DAZL gene in bulls with varying seminal parameters

In India, cross‐breeding of indigenous cattle with exotic cattle such as Holstein Friesian and Jersey has been going on since last four decades to improve milk production. Although it has led to increased milk yield, the subfertility in male cross‐bred progeny has remained a significant problem. Epigenetic modifications (DNA methylation, histone modifications and chromatin remodelling) are regarded as key players influencing gene expression. DAZL gene plays an important role in germline development and gametogenesis. The methylation and mRNA expression level of this gene have been significantly negatively correlated in the testes of cattle–yak hybrids and their parents. This study analysed the methylation profile of DAZL gene promoter in bull spermatozoa in an attempt to speculate its role in cross‐bred cattle subfertility. Semen samples from Sahiwal, Holstein Friesian and Frieswal bulls (Sahiwal X Holstein Friesian) with varying semen motility parameters were collected, and DNA was isolated. Methylation‐specific primers were used to amplify part of promoter and exon 1 of DAZL gene using bisulphite‐converted DNA. The amplified products were sequenced after cloning in pTZ57R/T vector. Sequence analysis revealed significantly higher DNA methylation of DAZL gene in Frieswal bulls with poor motility (28.26%) as compared to medium (15.21%) and high motility phenotype (6.52%). In pure‐bred counterparts, Sahiwal and Holstein Friesian, epigenetic marks were more in the former (15.21%) than the latter (4.34%), but in both cases, the values were lower as compared to the poor motility Frieswal bulls. This suggests that differential hypermethylation of the CpG islands could possibly influence reproductive parameters in bovines.     

荷斯坦牛Leptin基因外显子2多态性与繁殖力性状的相关性研究

以94头荷斯坦牛为试验材料,应用PCR-SSCP技术研究Leptin基因外显子2多态性与繁殖力的相关性。在Leptin基因外显子2的E2FB区上,经分析存在影响奶牛繁殖的多态位点,测序首次发现102nt处T突变为C。在平均产犊间隔上,AA与AT差异极显著（P〈0.01）;AT与TT差异极显著（P〈0.01）;A为优势等位基因,可作为荷斯坦牛育种中繁殖力的分子辅助标记。     

Organic or conventional dairy farming in northern Spain: Impacts on cow reproductive performance

Organic farming has traditionally given preference to indigenous breeds that are well adapted to local conditions; however, current trends towards increased yields may produce less robust animals with potentially low fertility. The Holstein‐Friesian breed dominates dairy sector, although there is a general concern that these cows may not be well adapted to organic systems. This study aims to evaluate the reproductive performance of organic dairy herds in northern Spain, by comparing organically reared Holstein‐Friesian with their counterparts reared on conventional farms and also with other organically reared breeds and crosses. Reproductive parameters were obtained for individual cows on organic, conventional pasture‐based and conventional zero‐grazing farms. The reproductive performance of Holstein‐Friesian cows was slightly better in organic systems than in pasture‐based conventional systems, but not than in zero‐grazing conventional systems. The comparison of reproductive performance of Holstein‐Friesian from organic and conventional systems and with other organically reared breeds and crosses enabled us to demonstrate that it is not the organic system that constrains the reproductive performance of Holstein‐Friesian, but that the manifestation of oestrus is less marked than in other breeds. Breeding selection considering reproductive traits and appropriate management of oestrous detection would improve the reproductive performance of Holstein‐Friesian cows.     

The association between lameness and fertility in dairy cows

One thousand, four hundred and ninety-one lactations in 770 Friesian, Holstein and Ayrshire crossbred cows have been used to study the associations between lameness and fertility. Lameness was associated with a longer interval between calving and first service and a longer interval between calving and conception. The largest increases in these intervals, of 17 and 30 days, respectively, occurred in cows with either sole or white line lesions occurring between 36 and 70 days after calving. The conception rate during the 63 days before a diagnosis of lameness was made was lower (31 per cent) than at other times (40 per cent).     

Changes of vitamin E status of periparturient dairy cows and newborn calves

Eleven primiparous Holstein Friesian and their crossbred calves (F1, Japanese Black cattle × Holstein Friesian) and 10 multiparous Holstein Friesian and their Holstein Friesian calves were used to evaluate vitamin E status in periparturient period. Plasma α‐tocopherol (α‐toc) concentrations of the multiparous cows were significantly higher than those of the primiparous cows from 60 days before expected calving to 90 days of lactation (P < 0.05). The multiparous cows had a further decrease in the concentrations of α‐toc and total lipid in plasma to the calving than the primiparous cows. Colostrum α‐toc concentrations in multiparous cows were significantly higher than those of the primiparous cows (P < 0.05). Plasma α‐toc concentrations of calves borne by the multiparous cows were significantly higher than those of the primiparous cows at 5 days of age (P < 0.05). Plasma α‐toc concentrations of calves were highest at 5 and 15 days of age in the calves borne by the multiparous and primiparous cows, respectively, and decreased thereafter till 90 days of age. The higher vitamin E status of multiparous cows over primiparous cows might have reflected nutritional composition in the rations. Their calves afforded higher plasma α‐toc levels after birth because of more α‐toc transfer via placenta and more α‐toc secretion in the colostrums thereafter. Plasma α‐toc concentrations of the calves might have decreased as the calves became dependent upon the solid feed of low vitamin E content.     

Autoregressive model for genetic evaluation of longitudinal reproductive traits in Brazilian Holstein cattle

Reproductive efficiency is major determinant of the dairy herd profitability. Thus, reproductive traits have been widely used as selection objectives in the current dairy cattle breeding programs. We aimed to evaluate strategies to model days open (DO), calving interval (CI) and daughter pregnancy rate (DPR) in Brazilian Holstein cattle. These reproductive traits were analysed by the autoregressive (AR) model and compared with classical repeatability (REP) model using 127,280, 173,092 and 127,280 phenotypic records, respectively. The first three calving orders of cows from 1,469 Holstein herds were used here. The AR model reported lower values for Akaike Information Criteria and Mean Square Errors, as well as larger model probabilities, for all evaluated traits. Similarly, larger additive genetic and lower residual variances were estimated from AR model. Heritability and repeatability estimates were similar for both models. Heritabilities for DO, CI and DPR were 0.04, 0.07 and 0.04; and 0.05, 0.06 and 0.04 for AR and REP models, respectively. Individual EBV reliabilities estimated from AR for DO, CI and DPR were, in average, 0.29, 0.30 and 0.29 units higher than those obtained from REP model. Rank correlation between EBVs obtained from AR and REP models considering the top 10 bulls ranged from 0.72 to 0.76; and increased from 0.98 to 0.99 for the top 100 bulls. The percentage of coincidence between selected bulls from both methods increased over the number of bulls included in the top groups. Overall, the results of model-fitting criteria, genetic parameters estimates and EBV predictions were favourable to the AR model, indicating that it may be applied for genetic evaluation of longitudinal reproductive traits in Brazilian Holstein cattle.     

Effects of first breeding age on the production and reproduction of Holstein heifers up to the third lactation

The effects of early initiation of first service for dairy heifers on their fertility and productivity up to the third lactation were examined under constant raising and management conditions. Eight Holstein heifers in their early breeding regimens and eight Holstein heifers in their late breeding regimens were initiated to be bred at 12 and 15 months of age, respectively, and were first calved at 21.5 and 25.1 months of age, respectively, with bodyweights of 563 and 638 kg after calving, respectively. Early first breeding resulted in a lower bodyweight and a lower body condition score, but it did not affect the fertility or milk production during the first lactation of heifers as cows. The calving intervals of cows to the second and third calving were similar in early and late bred heifers. Although the early bred heifers had a significantly lower fat‐corrected milk yield at the second lactation than that of the late bred heifers, early breeding did not impair the productivity indicated by the mean milk yield per day from birth to the end of the third lactation with a shorter production period.     

The sensitivity of predicted financial and genetic gains in Holsteins to changes in the economic value of traits

The objective of this study was to assess the impact of using different relative economic values (REVs) in selection indices on predicted financial and trait gains from selection of sires of cows and on the choice of leading Holstein bulls available in the UK dairy industry. Breeding objective traits were milk yield, fat yield, protein yield, lifespan, mastitis, non‐return rate, calving interval and lameness. Relative importance of a trait, as estimated by a.h², was only moderately related to the rate of financial loss or total economic merit (ΔTEM) per percentage under‐ or overestimation of REV (r = 0.38 and 0.29, respectively) as a result of the variance–covariance structure of traits. The effects on TEM of under‐ or overestimating trait REVs were non‐symmetrical. TEM was most sensitive to incorrect REVs for protein, fat, milk and lifespan and least sensitive to incorrect calving interval, lameness, non‐return and mastitis REVs. A guide to deciding which dairy traits require the most rigorous analysis in the calculation of their REVs is given. Varying the REVs within a fairly wide range resulted in different bulls being selected by index and their differing predicted transmitting abilities would result in the herds moving in different directions in the long term (20 years). It is suggested that customized indices, where the farmer creates rankings of bulls tailored to their specific farm circumstances, can be worthwhile.     

Trends in the reproductive performance of Holstein dairy cows in Iran

The study was undertaken to determine the trends in the reproductive performance of Holstein dairy cows in Iran during 1994 to 2008. Reproductive performance data for 528,034 lactations of 246,132 cows in 1,822 Holstein dairy herds of Iran were used. The potential effect of calving season, herd, parity, calving year, as well as herd size and 305-day milk production on reproductive performance traits was investigated using multiple regression models. The least squares means of age at first calving decreased by 3.1 (±0.06) days per year from 806.5 (±96.3) days in 1994 to 788 (±89.9) days in 2008. The least squares means of calving interval increased 1.02 (±0.03) days per year from 394.1 (±65) days in 1994 to 413.2 (±81) days in 2008. Greater 305-day milk production was associated with an average increase of 6.55 (±0.08) days in calving interval per 1,000-kg increase in milk yield. Larger herd size was associated with an average decrease of 0.22 (±0.02) days in calving interval per 50 cows per herd. The mean number of days dry was 88.6 (±51.3) days and increased by 0.82 (±0.02) days per year. In conclusion, reproductive performance in Holstein dairy herds has generally decreased, whereas herd size and milk production have increased over time. Producers may make significant improvements in herd reproduction by reviewing management strategies including the sire selection, reproductive management, inseminator training and techniques, and improved estrous detection. Moreover, it may be advisable for the fertility traits to be included in the genetic selection indices to reduce the rate of reproductive decline.     

Effect of DGAT1 and TG gene polymorphisms on intramuscular fat and on milk production traits in different cattle breeds in Hungary

The objective of this study was to estimate the effect of the thyroglobulin (TG) locus on beef quality traits in some beef cattle breeds and to investigate the effect of the DGAT1 locus on milk production traits in the Hungarian Holstein Friesian population. TG and DGAT1 genotypes were determined by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) assay. At the TG locus TT bulls showed the highest fat percentage values in the longissimus dorsi muscle (m. longissimus dorsi); the difference between CC and TT genotypes was significant. DGAT1 GC/GC cows had the highest milk, fat and protein yield values. Due to the relatively small number of GC/GC cows the difference proved to be significant only between AA/AA and AA/GC genotypes.     

Heterosis effects in a black and white dairy cattle population under different production environments

The effect of the environmental level of production (ENV) on the expression of heterosis for 305-day milk, fat, protein, and fat plus protein (FP) yields, lactation average somatic cell score (LSCS), and age at first calving (AFC) was investigated in first lactation Black and White dairy cows in the Netherlands, and officially enrolled in the Dutch herd-book. Holstein Friesian (HF), Dutch Friesian (DF), and first generation (F₁) crosses obtained from the mating of HF sires and DF dams (HD) were involved in the study, and data from animals with a calving date between 1990 and 2000 were used. A total of 22,930 cows with production and AFC information distributed in 3549 herds and 11,055 cows with LSCS information distributed in 2071 herds, were available. Adjusted lactation yield of milk for each herd was obtained using a model that accounted for fixed effects of herd, year and month of calving, genotype, and AFC. The overall mean of all adjusted data was computed, and 3 ENV were defined on the basis of the overall mean ± 0.5 standard deviations. Once ENV was defined, traits were analysed with a model that included fixed effects of ENV, herd nested within ENV, AFC (only production traits and LSCS), year and month of calving, genotype, and the interaction between ENV and genotype. Least squares means for the interaction effect were used to estimate heterosis and to evaluate its magnitude across ENV. Holstein Friesian achieved higher productions than DF. First generation crosses showed productions close to HF, especially in the low ENV. Estimates of heterosis for yield traits ranged from 2.4% (milk) in the high to 5.3% (fat) in the low ENV, and reduced with increasing ENV. Estimates for LSCS and AFC were low, with the exception of LSCS in the high ENV. Results suggest that the highest non-additive genetic effects for yield traits and LSCS were expressed in the most stressful ENV, i.e., the low one for production and the high one for LSCS.     

Increasing imputation and prediction accuracy for Chinese Holsteins using joint Chinese–Nordic reference population

This study investigated the effect of including Nordic Holsteins in the reference population on the imputation accuracy and prediction accuracy for Chinese Holsteins. The data used in this study include 85 Chinese Holstein bulls genotyped with both 54K chip and 777K (HD) chip, 2862 Chinese cows genotyped with 54K chip, 510 Nordic Holstein bulls genotyped with HD chip, and 4398 Nordic Holstein bulls genotyped with 54K chip and with deregressed proofs for five milk production traits. Based on these data, the accuracy of imputation from 54K to HD marker data and the accuracy of genomic predictions in Chinese Holstein were assessed. The allele correct rate increased around 2.7 and 1.7% in imputation from the 54K to the HD marker data for Chinese Holstein bulls and cows, respectively, when the Nordic HD‐genotyped bulls were included in the reference data for imputation. However, the prediction accuracy was improved slightly when using the marker data imputed based on the combined HD reference data, compared with using the marker data imputed based on the Chinese HD reference data only. On the other hand, when using the combined reference population including 4398 Nordic Holstein bulls, the accuracy of genomic predictions increased 6.5 percentage points together with a reduction of prediction bias. The HD markers did not outperform the 54K markers in genomic prediction based on the present data. The results indicate that for Chinese Holsteins, it is necessary to genotype more individuals with 54K chip to increase reference population rather than increasing marker density.     

Effects of complex vertebral malformation on fertility in Swedish holstein cattle

Complex vertebral malformation (CVM) is an autosomal recessive inherited defect in the Holstein breed. It causes intra-uterine mortality through the entire gestation period leading to repeat breeding and involuntary culling of cows and thereby economic losses. The defect was first reported in Denmark in 1999 and a direct DNA test for the defect has been available since February 2001. The aim of this study was to investigate if Holstein bulls heterozygous for the CVM gene had reduced reproductive performance, measured as non-return rate (NRR) and in a daughter fertility index. All genotyped Swedish Holstein bulls born between 1995 and 1999 were included. Altogether 228 bulls were analysed, of which 53 bulls, i.e. 23%, were confirmed CVM carriers. A statistically significant difference between carriers and non-carriers in the relative breeding value for NRR was observed for 168 days NRR (101.1+/-0.9 vs. 103.1+/-0.6, p<0.05). There was no difference for 28 days NRR whereas the difference approached significance for 56 days NRR. No significant effect of the paternal CVM genotype on the daughter fertility index was shown probably due to the complexity of traits this index is composed of. In conclusion, the study showed that carriers of the CVM defect have an inferior NRR compared with non-carriers.