CO2浓度升高与温度、干旱相互作用对植物生理生态过程的影响

从CO2浓度升高与温度、CO2浓度升高与干旱的相互作用以及三者协同作用3个方面,总结了近年来国内外关于全球变化对植物生理生态过程(包括光合作用、呼吸作用、水分利用率、化学成分以及生物量积累等方面)影响的研究进展,在此基础上指出未来全球变化背景下植物生理生态的研究应在分子水平上进一步深入,同时应加强CO2浓度升高与温度、土壤水分三者协同作用对植物影响的研究.     

Expression profiling of rice genes in early defense responses to blast and bacterial blight pathogens using cDNA microarray

In order to understand the defense machinery in the model cereal crop rice, we performed a large-scale analysis of rice gene expression in response to rice blast Magnaporthe grisea (M. grisea) or Magnaporthe oryzae and bacterial blight Xanthomonas oryzae pv. oryzae (Xoo) during the early incompatible and compatible interactions. Using a gene chip containing 10 254 rice cDNAs representing 9240 unique genes, we identified 794 and 612 genes differentially expressed in the incompatible and compatible rice–M. grisea interactions, respectively, with 274 genes co-regulated during both interactions. In the rice–Xoo pathosystem, 454 and 498 differentially expressed genes were identified in the incompatible and compatible interactions, respectively, including 237 co-regulated genes in the both interactions. By clustering differentially regulated genes from all these interactions, we identified 29 co-regulated genes in the all four interactions, and 86 and 74 co-regulated genes in the two incompatible and two compatible interactions, respectively. These differentially expressed genes could be classified into three categories, including M. grisea- and Xoo-regulated, M. grisea-specific, and Xoo-specific. The expression patterns of representative defense-related genes were further confirmed by RT-PCR. The large-scale expression data from our microarray analysis indicated the existence of distinctive as well as shared defense pathways between the rice–M. grisea and rice–Xoo interactions.     

Natural enemy‐mediated indirect interactions among prey species: potential for enhancing biocontrol services in agroecosystems

Understanding how arthropod pests and their natural enemies interact in complex agroecosystems is essential for pest management programmes. Theory predicts that prey sharing a predator, such as a biological control agent, can indirectly reduce each other's density at equilibrium (apparent competition). From this premise, we (i) discuss the complexity of indirect interactions among pests in agroecosystems and highlight the importance of natural enemy‐mediated indirect interactions other than apparent competition, (ii) outline factors that affect the nature of enemy‐mediated indirect interactions in the field and (iii) identify the way to manipulate enemy‐mediated interactions for biological control. We argue that there is a need to increase the link between community ecology theory and biological control to develop better agroecological methods of crop protection via conservation biological control. In conclusion, we identify (i) interventions to be chosen depending on agroecosystem characteristics and (ii) several lines of research that will improve the potential for enemy‐mediated indirect interactions to be applied to biological control. © 2014 Society of Chemical Industry     

Patterns of interaction between isolates of three pathovars of Pseudomonas syringae and accessions of a range of host and nonhost legume species

Isolates of three pathovars of Pseudomonas syringae were tested against 10 legume species. Some isolates of all pathovars showed cultivar-specific interactions with at least one legume species outside the expected host range. Lablab purpureus and Phaseolus lunatus were found to be hosts to isolates of both P. syringae pv. glycinea and P. syringae pv. phaseolicola, while Lathyrus latifolius was host to isolates of P. syringae pv. pisi and P. syringae pv. glycinea . Lens culinaris showed patterns of interaction with isolates of all three pathovars. Gene models based on mathematical estimates of minimum gene numbers agreed with those previously published for the interactions of P. syringae pv. pisi with Pisum sativum and P. syringae pv. phaseolicola with Phaseolus vulgaris. Two different gene-for-gene models based on five resistance/avirulence gene pairs were proposed to explain observed interactions between Glycine max and P. syringae pv . glycinea . Pathogen isolates which contained no known avirulences defined on their respective host species were found to carry cryptic avirulences recognized by other plant species. Estimates of minimum gene numbers required to explain the interactions of a plant species with all pathogen isolates or to explain the interactions of the isolates of one pathovar with all plant accessions were consistently lower than the sum of the minimum gene numbers required to explain the interactions of each individual component.     

Two-way coupling of unsaturated-saturated flow by integrating the SWAT and MODFLOW models with application in an irrigation district in arid region of West China

This paper presents the realization of two-way coupling of the unsaturated-saturated flow interactions of the SWAT2000 and MODFLOW96 models on the basis of the integrated surface/groundwater model SWATMOD99, and its application in Hetao Irrigation District (HID), Inner Mongolia, China. Major revisions and enhancements were made to the SWAT2000 and MODFLOW models for simulating the detailed hydrologic budget and coupled unsaturated and saturated interactions, and irrigation canal hydrology for the HID. The simulation results of seasonal groundwater recharge to and evaporate from the shallow groundwater, and the annual water budget over the district are presented and discussed. The results implied the necessity of two-way coupling of the unsaturated-saturated interactions when groundwater is shallow, and the feasibility of making comprehensive use of the information coming from both the surface water and groundwater models to make a more physically-based assessment of the coupled interactions.     

Interactions among herbivores,microbial insecticides and crop plants

Knowledge of the interactions among lepidopterous insects, microbial insecticides and plants is either lacking or incomplete. In some of the interactions, plant allelochemicals antagonized the insecticidal activity of the microbe by means of feeding reduction. In others, microbe activity was enhanced either by causing insect toxicity or by a potentiation of the crystal protein. Nutritional evaluations of the interactions amongHeliothis virescens. Bacillus thuringiensis crystal protein and tannin showed that microbe toxicity in the larva was antagonized by this phytochemical.     

Disease complexes involving plant parasitic nematodes and soilborne pathogens

This review discusses the mechanisms underlying synergistic interactions between phytophagous nematodes and soilborne pathogens, and identifies biotic and abiotic factors affecting these interactions. Approaches towards the resolution and management of nematode–pathogen complexes are considered and discussed.     

反枝苋乙酰乳酸合成酶与烟嘧磺隆分子结合模式分析及抗性位点预测

为研究反枝苋对乙酰乳酸合成酶 (ALS) 抑制剂的抗性机制，本研究根据反枝苋的ALS氨基酸序列，利用同源模建的方法构建了其三维结构，并采用分子对接和分子动力学模拟的方法预测了反枝苋ALS与烟嘧磺隆分子的结合模式。根据结合模式对已报道的Pro 197和Trp 574等位点突变产生抗性的原因进行了分析。结果发现:Pro 197和Trp 574等位点的残基与烟嘧磺隆分子之间存在重要的疏水作用和π-π作用等其他相互作用，或该位点的残基具有特殊结构影响着通道形状。分析表明，ALS与烟嘧磺隆之间的氢键、疏水作用等非共价相互作用以及通道形状的改变都有可能影响二者结合稳定性，从而使杂草产生抗性。基于此结论，本研究预测Val 196、Met 200、Phe 206和Lys 256突变同样可能使杂草对ALS抑制剂敏感度发生变化。本研究利用计算机模拟技术分析了ALS抗性机制，为反抗性除草剂的分子设计提供了指导。     

水稻防御反应相关基因对稻瘟病菌的响应

水稻与稻瘟病菌的互作已成为研究植物与病原真菌互作的模式系统。利用RT-PCR技术检测了6个水稻品种(分别含有抗病基因Pik-s、Pita、Pit、Pi1、Pi9的近等系及回交亲本丽江新团黑谷LTH)与稻瘟病菌互作过程中多个信号相关及PR基因的表达。结果表明带有稻瘟病抗性基因Pik-s、Pita、Pit的水稻品种和LTH对稻瘟病菌#626侵染表现为亲和互作,带Pi1和Pi9的水稻品种表现为非亲和互作;稻瘟病菌接种后,亲和互作中MAPK6和MAPK12表现为上调表达,带有抗性基因Pi9的水稻品种IRBL22中BIMK2表现为上调表达。总体来看,含有不同抗病基因的水稻近等系中的PR基因对稻瘟病菌的响应较为多样,非亲和互作中在早期或早中期表现为PR基因上调表达,而亲和互作中主要在晚期上调表达,说明这些PR基因表达的时间在植物与病原互作的不同时期发挥着不同的作用。     

水稻与稻瘟病菌非亲和性互作中重要防御酶活性变化规律研究

 选以CO39为背景的水稻抗稻瘟病近等基因系,与稻瘟菌生理小种ZC₁₃(菌株97-151a)组成的3类典型非亲和性互作,以亲和性互作为对照,对各互作中过氧化物酶(POD)、苯丙氨酸解氨酶(PAL)、几丁质酶及β-1,3-葡聚糖酶的活性变化规律进行了系统研究。完全非亲和性互作C101A51/97-151a、高度非亲和性互作C101L AC/97-151a及中度非亲和性互作C104 PKT/97-151a,POD比活性接种后即开始明显升高,48h前达到高峰,升高趋势一直持续到7d完全显症时,幅度基本与各互作非亲和程度呈正相关;亲和性互作CO39/97-151a接种后40 h POD比活性才开始升高,4~6 d达到高峰,峰值也较大。3类非亲和性互作PAL比活性在接种后0 h或16 h开始较明显升高,整个互作中形成3~4个较明显的峰;亲和性互作中PAL比活性一直明显下降。3类非亲和性互作外切几丁质酶比活性接种后即开始升高,基本一直保持升高趋势,在40 h前幅度较大,并形成1~3个较高的峰;亲和性互作外切几丁质酶比活性接种后即开始大幅度升高直至完全显症,48h后幅度远高于非亲和性互作。3类非亲和性互作β-1,3-葡聚糖酶比活性在24 h内开始较明显升高,在48h前形成2~3个较明显的峰;亲和性互作在接种后β-1,3-葡聚糖酶比活性即开始升高,在48h后显著高于非亲和性互作。讨论了POD、PAL、几丁质酶及β-1,3-葡聚糖酶参与水稻抗稻瘟病的可能性。     

杨扇舟蛾颗粒体病毒经口侵染因子PIF0～PIF6间分子互作的酵母双杂交验证

为阐明杨扇舟蛾颗粒体病毒(Clostera anachoreta granulovirus,ClanGV)的口服侵染机制,利用酵母双杂交技术,通过双向互作方法研究了ClanGV的经口侵染因子PIF0、PIF1、PIF2、PIF3、PIF4、PIF5和PIF6之间的分子互作情况。自激活试验证明,PIF5的重组诱饵载体(B5)有自激活现象,其它重组诱饵载体均无自激活现象。酵母双杂交试验结果表明,ClanGV的4个经口侵染因子PIF1～PIF4之间存在双向互作现象,而且这4个蛋白均能同时与自身发生互作,暗示这4个经口侵染因子有可能是以二聚体或多聚体的形式存在并发挥功能。在ClanGV经口侵染因子间的6组单向互作中,PIF5作为捕获载体时分别能与PIF1、PIF3和PIF4发生互作,PIF6作为诱饵载体时分别能与PIF3和PIF4发生互作,PIF0作为捕获载体时能与PIF4发生互作。表明ClanGV的经口侵染因子像核型多角体病毒(nucleopolyhedrovirus,NPV)一样,在病毒粒子表面通过分子互作形成复合体并在病毒的经口侵染过程中发挥功能。     

Combined use of biocontrol agents to manage plant diseases in theory and practice

Effective use of biological control agents (BCAs) is a potentially important component of sustainable agriculture. Recently, there has been an increasing interest among researchers in using combinations of BCAs to exploit potential synergistic effects among them. The methodology for investigating such synergistic effects was reviewed first and published results were then assessed for available evidence for synergy. Correct formulation of hypotheses based on the theoretical definition of independence (Bliss independence or Loewe additivity) and the subsequent and statistical testing for the independence-synergistic-antagonistic interactions have rarely been carried out thus far in studies on biocontrol of plant diseases. Thus, caution must be taken when interpreting reported "synergistic" effects without assessing the original publications. Recent theoretical modeling work suggested that disease suppression from combined use of two BCAs was, in general, very similar to that achieved by the more efficacious one, indicating no synergistic but more likely antagonistic interactions. Only in 2% of the total 465 published treatments was there evidence for synergistic effects among BCAs. In the majority of the cases, antagonistic interactions among BCAs were indicated. Thus, both theoretical and experimental studies suggest that, in combined use of BCAs, antagonistic interactions among BCAs are more likely to occur than synergistic interactions. Several research strategies, including formulation of synergy hypotheses in relation to biocontrol mechanisms, are outlined to exploit microbial mixtures for uses in biocontrol of plant diseases.     

Back to the roots: Understanding banana below-ground interactions is crucial for effective management of Fusarium wilt

Global banana production is affected by Fusarium wilt, a devastating disease caused by the soilborne root-infecting fungus, Fusarium oxysporum f. sp. cubense (Foc). Fusarium wilt is notoriously difficult to manage because infection arises through complex below-ground interactions between Foc, the plant, and the soil microbiome in the root–soil interface, defined as the rhizosphere. Interactions in the rhizosphere play a pivotal role in processes associated with pathogen development and plant health. Modulation of these processes through manipulation and management of the banana rhizosphere provides an auspicious prospect for management of Fusarium wilt. Yet, a fundamental understanding of interactions in the banana rhizosphere is still lacking. The objective of this review is to discuss the state-of-the-art of the relatively scant data available on banana below-ground interactions in relation to Fusarium wilt and, as a result, to highlight key research gaps. Specifically, we seek to understand (a) the biology of Foc and its interaction with banana; (b) the ecology of Foc, including the role of root-exuded metabolites in rhizosphere interactions; and (c) soil management practices and how they modulate Fusarium wilt. A better understanding of molecular and ecological factors influencing banana below-ground interactions has implications for the development of targeted interventions in the management of Fusarium wilt through manipulation of the banana rhizosphere.     

Defence responses of pepper (Capsicum annuum L.) infected with incompatible and compatible strains of Phytophthora capsici

In this study, we investigated the activities of β-1,3-glucanase and peroxidase enzymes in the leaves of pepper cultivar A3 infected with the incompatible strain PC and the compatible strain HX-9 of Phytophthora capsici. The activities of β-1,3-glucanase and peroxidase enzymes substantially increased in the incompatible interactions compared to the compatible interactions. We also analysed the expression patterns of four defence-related genes, including CABPR1, CABGLU, CAPO1 and CaRGA1, in the leaves and roots of pepper inoculated with different strains of P. capsici. All gene expression levels were higher in the leaves than in the roots. Markedly different expression patterns were observed between incompatible and compatible host-pathogen interactions. In the incompatible interactions, the expression levels of CABPR1, CABGLU and CAPO1 genes in leaves increased by a maximum of 17.2-, 13.2- and 20.5-fold at 24, 12 and 12 h, respectively, whereas the CaRGA1 gene expression level increased to a lesser degree, 6.0-fold at 24 h. However, in the compatible interactions, the expression levels of the four defence-related genes increased by a maximum of 11.2-, 8.6-, 7.9- and 2.0-fold at 48, 24, 48 and 72 h, respectively. Compared to the leaves, the expression levels of the four defence-related genes were much lower in the roots. The highest levels of mRNA were those of the CABPR1 gene, which increased 5.1-fold at 24 h in the incompatible and 3.2-fold at 48 h in the compatible interactions. The other three genes exhibited lower expression levels in the incompatible and compatible interactions. These results further confirmed that defence-related genes might be involved in the defence response of pepper to P. capsici attack.     

Genetic variation for resistance to septoria tritici blotch in Iranian tetraploid wheat landraces

Septoria tritici blotch (STB), caused by Mycosphaerella graminicola has recently become one of the devastating diseases in Iran causing significant yield losses on most commercial bread and durum wheat cultivars. Iran is located in the Fertile Crescent, a region where wheat was historically domesticated; and, thus, landraces derived from this region are of considerable global interest for identification of new sources of resistance to various stresses. Here, we report on the resistance responses of 45 tetraploid wheat landraces collected from different provinces of Iran to eight M. graminicola isolates. In total 138 isolate-specific resistances were found among all interactions (n = 360). The highest number of specific resistances (30 out of 32 interactions) was found in wheat landraces collected from West Azarbaijan. In contrast, all landraces from Kordestan were highly susceptible to M. graminicola isolates and only one isolate-specific resistance was identified among 106 isolate-wheat interactions. Kermanshah landraces showed the highest resistance variation against different isolates. About 57 isolate-specific resistances were identified among 104 interactions. Ilam landraces were highly resistant to STB as 28 specific resistances were observed among 32 interactions. Markazi (n = 2) and Sistan-Baluchestan (n = 1) were susceptible to all isolates tested. Landraces from Lorestan were generally susceptible to isolates tested as 26 susceptible responses were observed out of 32 interactions. Our results indicate that landraces collected from the Fertile Crescent region may possess diverse effective resistance genes or valuable broad spectrum resistance genes, and that their identification is of interest and can be exploited in breeding programs.     

Mycelial compatibility groups in Sclerotium cepivorum

Isolates of Sclerotium cepivorum from the Holland–Bradford Marsh, Ontario, Canada ( n  = 146) and other locations ( n  =23) were evaluated for mycelial compatibility in agar culture and by transmitted light microscopy. In compatible interactions, hyphae of paired colonies anastomosed without cell deterioration or death at the point of fusion. In some incompatible interactions, hyphae of paired colonies were initially similar to those of compatible interactions but were later followed by deterioration or death of the fused cells. Incompatible interactions were associated with a red–brown colour that, in mass, produced a dark line at the junction of the two colonies. In other incompatible interactions, hyphae were observed to bypass or repel each other without fusing. Compatible and incompatible reactions were used to define nine mycelial compatibility groups (MCGs) among the isolates examined. Among isolates from Ontario, no incompatibility responses were observed among isolates from individual fields (e.g. no intrafield variability) but two MCGs were found among isolates from different fields (e.g. interfield variability). Among isolates from other regions, seven additional MCGs were detected that consisted of one to eight isolates. Two isolates were variable in reaction and were not assigned to any MCG. Three isolates from Switzerland were compatible with MCG-1 isolates from Ontario; and one isolate from Switzerland, two from England, two from New Zealand, and two from Australia were all intercompatible. The results establish that mycelial compatibility can be used to reflect genetic heterogeneity among isolates of S. cepivorum .     

Interactions in the Brassica napus–Pyrenopeziza brassicae pathosystem and sources of resistance to P. brassicae (light leaf spot)

Pyrenopeziza brassicae, cause of light leaf spot (LLS), is an important pathogen of oilseed rape and vegetable brassicas and has a wide geographic distribution. Exploitation of host resistance remains the most sustainable and economically viable solution for disease management. This study evaluated 18 oilseed rape cultivars or breeding lines for host resistance against P. brassicae in glasshouse experiments. Selected cultivars/lines were inoculated with eight single-spore isolates of the pathogen obtained from three different regions in England. Analysis of P. brassicae infection-related changes on host plants identified leaf deformation as a characteristic feature associated with P. brassicae infection, this showed poor correlation to LLS severity measured as the amount of pathogen sporulation on infected plants. Resistant host phenotypes were identified by limitation of P. brassicae sporulation, with or without the presence of a necrotic response (black flecking phenotype). Investigation of this pathosystem revealed significant differences between cultivars/lines, between isolates, and significant cultivar/line-by-isolate interactions. In total, 37 resistant and 16 moderately resistant interactions were identified from 144 cultivar/line-by-isolate interactions using statistical methods. Most of the resistant/moderately resistant interactions identified in this study appeared to be nonspecific towards the isolates tested. Our results suggested the presence of isolate-specific resistant interactions for some cultivars. Several sources of resistance have been identified that are valuable for oilseed rape breeding programmes.     

Proteomic studies of phytopathogenic fungi,oomycetes and their interactions with hosts

Proteomics, the systematic analysis of the proteome, is a powerful tool in the post-genomic era. Proteomics studies have examined global changes in proteomes of phytopathogenic fungi, oomycetes and their hosts during compatible or incompatible interactions. This article compiles proteomics reports in order to decipher the molecular mechanisms underlying fungal development (infection-related morphogenesis), fungal or oomycete—host plant interactions, and phytopathogenesis.     

A spatial-explicit dynamic vegetation model that couples carbon,water,and nitrogen processes for arid and semiarid ecosystems

Arid and semiarid ecosystems,or dryland,are important to global biogeochemical cycles.Dryland's community structure and vegetation dynamics as well as biogeochemical cycles are sensitive to changes in climate and atmospheric composition.Vegetation dynamic models has been applied in global change studies,but the complex interactions among the carbon(C),water,and nitrogen(N) cycles have not been adequately addressed in the current models.In this study,a process-based vegetation dynamic model was developed to study the responses of dryland ecosystems to environmental changes,emphasizing on the interactions among the C,water,and N processes.To address the interactions between the C and water processes,it not only considers the effects of annual precipitation on vegetation distribution and soil moisture on organic matter(SOM) decomposition,but also explicitly models root competition for water and the water compensation processes.To address the interactions between C and N processes,it models the soil inorganic mater processes,such as N mineralization/immobilization,denitrification/nitrification,and N leaching,as well as the root competition for soil N.The model was parameterized for major plant functional types and evaluated against field observations.