Microbial immobilization of ammonium and nitrate in relation to ammonification and nitrification rates in organic and conventional cropping systems

Agricultural systems that receive high or low organic matter (OM) inputs would be expected to differ in soil nitrogen (N) transformation rates and fates of ammonium (NH₄⁺) and nitrate (NO₃⁻). To compare NH₄⁺ availability, competition between nitrifiers and heterotrophic microorganisms for NH₄⁺, and microbial NO₃⁻ assimilation in an organic vs. a conventional irrigated cropping system in the California Central Valley, chemical and biological soil assays, ¹⁵N isotope pool dilution and ¹⁵N tracer techniques were used. Potentially mineralizable N (PMN) and hot minus cold KCl-extracted NH₄⁺ as indicators of soil N supplying capacity were measured five times during the tomato growing season. At mid-season, rates of gross ammonification and gross nitrification after rewetting dry soil were measured in microcosms. Microbial immobilization of NO₃⁻ and NH₄⁺ was estimated based on the uptake of ¹⁵N and gross consumption rates. Gross ammonification, PMN, and hot minus cold KCl-extracted NH₄⁺ were approximately twice as high in the organically than the conventionally managed soil. Net estimated microbial NO₃⁻ assimilation rates were between 32 and 35% of gross nitrification rates in the conventional and between 37 and 46% in the organic system. In both soils, microbes assimilated more NO₃⁻ than NH₄⁺. Heterotrophic microbes assimilated less NH₄⁺ than NO₃⁻ probably because NH₄⁺ concentrations were low and competition by nitrifiers was apparently strong. The high OM input organic system released NH₄⁺ in a gradual manner and, compared to the low OM input conventional system, supported a more active microbial biomass with greater N demand that was met mainly by NO₃⁻ immobilization.     

Recovery of nitrification and production of NO and N2O after exposure of soil to acetylene

Incubation of soil under low partial pressures of acetylene (10 Pa) is a widely used method to specifically inhibit nitrification due to the suicide inhibition of ammonium monooxygenase (AMO), the first enzyme in NH₄ ⁺ oxidation by nitrifying bacteria. Although the inhibition of AMO is irreversible, recovery of activity is possible if new enzyme is synthesized. In experiments with three different soils, NH₄ ⁺ concentrations decreased and NO₃ ^– concentrations increased soon after acetylene was removed from the atmosphere. Recovery of NO production started immediately after the removal of acetylene. The release rates of NO and N₂O were higher in soil samples which were only preincubated with 10 Pa acetylene than in those which were kept in the presence of 10 Pa acetylene. In the permanent presence of 10 Pa acetylene, NH₄ ⁺ and NO₃ ^– concentrations stayed constant, and the release rates of NO and N₂O were low. These low release rates were apparently due to processes other than nitrification. Our experiments showed that the blockage of nitrification by low (10 Pa) acetylene partial pressures is only reliable when the soil is kept in permanent contact with acetylene. Received: 17 July 1996     

Differences in isotopic fractionation of nitrogen in water-saturated and unsaturated soils

Temporal variations in δ¹⁵N of NH₄⁺ and NO₃⁻ in water-saturated and unsaturated soils were examined in a laboratory incubation study. Ammonium sulfate (δ¹⁵N=−2.6‰) was added to 25 g samples of soil at concentrations of 160 mg N kg⁻¹. Soils were then incubated under unsaturated (50% of water holding capacity at saturation, WHC) or saturated (100% of WHC) water conditions for 7 and 36 d, respectively. During 7 d incubation of unsaturated soil, the NH₄⁺-N concentration decreased from 164.8 to 34.4 mg kg⁻¹, and the δ¹⁵N of NH₄⁺ increased from −0.4 to +57.2‰ through nitrification, as evidenced by corresponding increase in NO₃⁻-N concentration and lower δ¹⁵N of NO₃⁻ (product) than that of NH₄⁺ (substrate) at each sampling time. In saturated soil, the concentration of NH₄⁺-N decreased gradually from 162.4 to 24.2 mg kg⁻¹, and the δ¹⁵N values increased from +0.8 to +21.0‰ during 36 d incubation. However, increase in NO₃⁻ concentration was not observed due to loss of NO₃⁻ through concurrent denitrification in anaerobic sites. The apparent isotopic fractionation factors (α_s/p) associated with decrease in NH₄⁺ concentration were 1.04 and 1.01 in unsaturated and saturated soils, respectively. Since nitrification is likely to introduce greater isotope fractionation than microbial immobilization, the higher value for unsaturated soil probably reflected faster nitrification under aerobic conditions. The lower value for saturated soil suggests that immobilization and subsequent remineralization of NH₄⁺ were relatively more dominant than nitrification under the anaerobic conditions.     

Evidence that fungi can oxidize NH4+ to NO3− in a grassland soil

The contribution of bacteria and fungi to NH₄⁺ and organic N (N_org) oxidation was determined in a grassland soil (pH 6.3) by using the general bacterial inhibitor streptomycin or the fungal inhibitor cycloheximide in a laboratory incubation study at 20°C. Each inhibitor was applied at a rate of 3 mg g^?1 oven‐dry soil. The size and enrichment of the mineral N pools from differentially (NH₄¹⁵NO₃ and ¹⁵NH₄NO₃) and doubly labelled (¹⁵NH₄¹⁵NO₃) NH₄NO₃ were measured at 3, 6, 12, 24, 48, 72, 96 and 120 hours after N addition. Labelled N was applied to each treatment, to supply NH₄⁺‐N and NO₃^?‐N at 3.15 μmol N g^?1 oven‐dry soil. The N treatments were enriched to 60 atom % excess in ¹⁵N and acetate was added at 100 μmol C g^?1 oven‐dry soil, to provide a readily available carbon source. The oxidation rates of NH₄⁺ and N_org were analysed separately for each inhibitor treatment with a ¹⁵N tracing model. In the absence of inhibitors, the rates of NH₄⁺ oxidation and organic N oxidation were 0.0045 μmol N g^?1 hour^?1 and 0.0023 μmol N g^?1 hour^?1, respectively. Streptomycin had no effect on nitrification but cycloheximide inhibited the oxidation of NH₄⁺ by 89% and the oxidation of organic N by more than 30%. The current study provides evidence to suggest that nitrification in grassland soil is carried out by fungi and that they can simultaneously oxidize NH₄⁺ and organic N.     

Variation in the relationship between nitrification and acidification of subtropical soils as affected by the addition of urea or ammonium sulfate

The effects on nitrification and acidification in three subtropical soils to which (NH₄)₂SO₄ or urea had been added at rate of 250 mg N kg⁻¹ was studied using laboratory-based incubations. The results indicated that NH₄⁺ input did not stimulate nitrification in a red forest soil, nor was there any soil acidification. Unlike red forest soil, (NH₄)₂SO₄ enhanced nitrification of an upland soil, whilst urea was more effective in stimulating nitrification, and here the soil was slightly acidified. For another upland soil, NH₄⁺ input greatly enhanced nitrification and as a result, this soil was significantly acidified. We conclude that the effects of NH₄⁺ addition on nitrification and acidification in cultivated soils would be quite different from in forest soils. During the incubation, N isotope fractionation was closely related to the nitrifying capacity of the soils.     

Short-term competition between crop plants and soil microbes for inorganic N fertilizer

Agricultural systems that receive high amounts of inorganic nitrogen (N) fertilizer in the form of either ammonium (NH₄⁺), nitrate (NO₃⁻) or a combination thereof are expected to differ in soil N transformation rates and fates of NH₄⁺ and NO₃⁻. Using ¹⁵N tracer techniques this study examines how crop plants and soil microbes vary in their ability to take up and compete for fertilizer N on a short time scale (hours to days). Single plants of barley (Hordeum vulgare L. cv. Morex) were grown on two agricultural soils in microcosms which received either NH₄⁺, NO₃⁻ or NH₄NO₃. Within each fertilizer treatment traces of ¹⁵NH₄⁺ and ¹⁵NO₃⁻ were added separately. During 8 days of fertilization the fate of fertilizer ¹⁵N into plants, microbial biomass and inorganic soil N pools as well as changes in gross N transformation rates were investigated. One week after fertilization 45-80% of initially applied ¹⁵N was recovered in crop plants compared to only 1-10% in soil microbes, proving that plants were the strongest competitors for fertilizer N. In terms of N uptake soil microbes out-competed plants only during the first 4 h of N application independent of soil and fertilizer N form. Within one day microbial N uptake declined substantially, probably due to carbon limitation. In both soils, plants and soil microbes took up more NO₃⁻ than NH₄⁺ independent of initially applied N form. Surprisingly, no inhibitory effect of NH₄⁺ on the uptake and assimilation of nitrate in both, plants and microbes, was observed, probably because fast nitrification rates led to a swift depletion of the ammonium pool. Compared to plant and microbial NH₄⁺ uptake rates, gross nitrification rates were 3-75-fold higher, indicating that nitrifiers were the strongest competitors for NH₄⁺ in both soils. The rapid conversion of NH₄⁺ to NO₃⁻ and preferential use of NO₃⁻ by soil microbes suggest that in agricultural systems with high inorganic N fertilizer inputs the soil microbial community could adapt to high concentrations of NO₃⁻ and shift towards enhanced reliance on NO₃⁻ for their N supply.     

Natural N abundances of inorganic nitrogen in soil treated with fertilizer and compost under changing soil moisture regimes

This study was conducted to examine whether the applications of N-inputs (compost and fertilizer) having different N isotopic compositions (δ¹⁵N) produce isotopically different inorganic-N and to investigate the effect of soil moisture regimes on the temporal variations in the δ¹⁵N of inorganic-N in soils. To do so, the temporal variations in the concentrations and the δ¹⁵N of NH₄⁺ and NO₃⁻ in soils treated with two levels (0 and 150 mg N kg⁻¹) of ammonium sulfate (δ¹⁵N=−2.3‰) and compost (+13.9‰) during a 10-week incubation were compared by changing soil moisture regime after 6 weeks either from saturated to unsaturated conditions or vice versa. Another incubation study using ¹⁵N-labeled ammonium sulfate (3.05 ¹⁵N atom%) was conducted to estimate the rates of nitrification and denitrification with a numerical model FLUAZ. The δ¹⁵N values of NH₄⁺ and NO₃⁻ were greatly affected by the availability of substrate for each of the nitrification and denitrification processes and the soil moisture status that affects the relative predominance between the two processes. Under saturated conditions for 6 weeks, the δ¹⁵N of NH₄⁺ in soils treated with fertilizer progressively increased from +2.9‰ at 0.5 week to +18.9‰ at 6 weeks due to nitrification. During the same period, NO₃⁻ concentrations were consistently low and the corresponding δ¹⁵N increased from +16.3 to +39.2‰ through denitrification. Under subsequent water-unsaturated conditions, the NO₃⁻ concentrations increased through nitrification, which resulted in the decrease in the δ¹⁵N of NO₃⁻. In soils, which were unsaturated for the first 6-weeks incubation, the δ¹⁵N of NH₄⁺ increased sharply at 0.5 week due to fast nitrification. On the other hand, the δ¹⁵N of NO₃⁻ showed the lowest value at 0.5 week due to incomplete nitrification, but after a subsequence increase, they remained stable while nitrification and denitrification were negligible between 1 and 6 weeks. Changing to saturated conditions after the initial 6-weeks incubation, however, increased the δ¹⁵N of NO₃⁻ progressively with a concurrent decrease in NO₃⁻ concentration through denitrification. The differences in δ¹⁵N of NO⁻₃ between compost and fertilizer treatments were consistent throughout the incubation period. The δ¹⁵N of NO₃⁻ increased with the addition of compost (range: +13.0 to +35.4‰), but decreased with the addition of fertilizer (−10.8 to +11.4‰), thus resulting in intermediate values in soils receiving both fertilizer and compost (−3.5 to +20.3‰). Therefore, such differences in δ¹⁵N of NO₃⁻ observed in this study suggest a possibility that the δ¹⁵N of upland-grown plants receiving compost would be higher than those treated with fertilizer because NO₃⁻ is the most abundant N for plant uptake in upland soils.     

Nitrification in soils incubated with pig slurry or ammonium sulphate

The effects of temperature, moisture content and the addition of pig slurry on nitrification in two soils were studed. There was no accumulation of NO₂^?-N under the incubation conditions investigated and the accumulation of NO₃^?-N was linear for additions of 50–250 μg NH₄⁺-N g^? soil, either as ammonium sulphate or as pig slurry. Nitrate formation was treated as a single step, zero order process to enable a rate constant to be calculated. Nitrification rate increased with increasing moisture content up to the highest level tested, soil water potential ?8.0 kPa, corresponding to approximately 60% of water holding capacity in both soils. Measurable nitrification was found in both soils at the lowest moisture content (soil water potential ?1.5 MPa) and temperature (5° C) tested. The nitrification rate constant in soils treated with 50 μg NH₄⁺-N g^? soil was not significantly affected (P = 0.05) by the form of ammonium added. Addition of 250 μg NH₄⁺-N as ammonium sulphate caused a marked inhibition of nitrification at all moisture contents and temperatures. Addition of 250 μg NH₄⁺-N as pig slurry caused a marked increase in nitrification rate, the increase being greater at the higher temperatures and moisture contents.     

Evidence of carbon stimulated N transformations in grassland soil after slurry application

High nitrification rates which convert ammonium (NH₄⁺) to the mobile ions NO₂⁻ and NO₃⁻ are of high ecological significance because they increase the potential for N losses via leaching and denitrification. Nitrification can be performed by chemoautotrophic or heterotrophic organisms and heterotrophic nitrifiers can oxidise either mineral (NH₄⁺) or organic N. Selective nitrification inhibitors and ¹⁵N tracer studies have been used in an attempt to separate heterotrophic and autotrophic nitrification. In a laboratory study we determined the effect of cattle slurry on the oxidation of mineral NH₄⁺-N and organic-N by labelling the NH₄⁺ or NO₃⁻ pools separately or both together with ¹⁵N. The size and enrichment of the mineral N pools were determined at intervals. To calculate gross N transformation rates a ¹⁵N tracing model was developed. This model consists of the three N-pools NH₄⁺, NO₃⁻ and organic N. Sub-models for decomposition of degradable carbon in the soil and the slurry were added to the model and linked to the N transformation rates. The model was set up in the software ModelMaker which contains non-linear optimization routines to determine model parameters. The application of cattle slurry increased the rate of nitrifcation by a factor of 20 compared with the control. The size and enrichment of the mineral N pools provided evidence that nitrification was due to the conversion of NH₄⁺ to NO₃⁻ and not the conversion of organic N to NO₃⁻. There was evidence that slurry-enhanced oxidation of NH₄⁺ to NO₃⁻ was due to a combination of autotrophic and heterotrophic transformations. Slurry application increased the mineralisation rate by approximately a factor of two compared with the control and the rate of immobilisation of NH₄⁺ by approximately a factor of three.     

Biological and physical effects of non-native earthworms on nitrogen cycling in riparian soils

Global nitrogen cycling is being altered by anthropogenic disturbances including invasion by non-native species. European and Asian earthworms have invaded northern temperate forests in North America with dramatic consequences for litter thickness, forest floor plant diversity, and soil nitrogen cycling. Invasive earthworms present at the boundary of terrestrial and aquatic ecosystems (i.e., riparian zones) may alter the flux of nitrogen into adjacent aquatic ecosystems. We examined how nitrogen cycling in riparian soil responds to amendments of invasive earthworms or artificial earthworm burrows. In earthworm-free riparian plots (0.25 m²), we established treatments of invasive earthworms (60 g fresh mass·m⁻²), artificial burrows (120 m⁻²), or control plots and sampled the plots after 30 days. Before and after treatment application we measured major soil characteristics (water-filled pore space, organic matter, and pH), nitrogen pools (exchangeable NH₄⁺ and NO₃⁻), and nitrogen transformation rates (net N-mineralization, net nitrification, and denitrification). Exchangeable NH₄⁺ and NO₃⁻ changed through time but did not differ among treatments. Net N-mineralization and net nitrification rates did not change through time and were similar across all treatments. However, denitrification rates in plots with added earthworms were 4 times greater than rates in control and burrow-only plots, which represents a large rapid increase in gaseous nitrogen flux out of these riparian soils. For all response variables, artificial burrows responded similarly to control plots, suggesting that earthworm biological activity (i.e., feeding, excretion, and mucus production) rather than physical effects (i.e., burrowing and soil aeration) drove the changes in nitrogen cycling. Examination of soil nitrogen pool and flux measurements suggest that this increase in denitrification was coupled with NH₄⁺ consumption by nitrifying bacteria, but future studies are needed to confirm this hypothesis. We conclude that the activity of invasive earthworms in riparian zones can increase the flux of N out of riparian zones, but the hydrologic context of the riparian zone (e.g., pore-water residence time) ultimately controls whether denitrification or nitrate leaching is the dominant flux of N.     

Impact of land-use types on soil nitrogen net mineralization in the sandstorm and water source area of Beijing,China

Changes of land-use type (LUT) can affect soil nutrient pools and cycling processes that relate long-term sustainability of ecosystem, and can also affect atmospheric CO₂ concentrations and global warming through soil respiration. We conducted a comparative study to determine NH₄⁺ and NO₃⁻ concentrations in soil profiles (0–200 cm) and examined the net nitrogen (N) mineralization and net nitrification in soil surface (0–20 cm) of adjacent naturally regenerated secondary forests (NSF), man-made forests (MMF), grasslands and cropland soils from the windy arid and semi-arid Hebei plateau, the sandstorm and water source area of Beijing, China. Cropland and grassland soils showed significantly higher inorganic N concentrations than forest soils. NO₃⁻-N accounted for 50–90% of inorganic N in cropland and grassland soils, while NH₄⁺-N was the main form of inorganic N in NSF and MMF soils. Average net N-mineralization rates (mg kg⁻¹ d⁻¹) were much higher in native ecosystems (1.51 for NSF soils and 1.24 for grassland soils) than in human disturbed LUT (0.15 for cropland soils and 0.85 for MMF soils). Net ammonification was low in all the LUT while net nitrification was the major process of net N mineralization. For more insight in urea transformation, the increase in NH₄⁺ and, NO₃⁻ concentrations as well as C mineralization after urea addition was analyzed on whole soils. Urea application stimulated the net soil C mineralization and urea transformation pattern was consistent with net soil N mineralization, except that the rate was slightly slower. Land-use conversion from NSF to MMF, or from grassland to cropland decreased soil net N mineralization, but increased net nitrification after 40 years or 70 years, respectively. The observed higher rates of net nitrification suggested that land-use conversions in the Hebei plateau might lead to N losses in the form of nitrate.     

Stimulated activity of the soil nitrifying community accelerates community adaptation to Zn stress

Field data have shown that soil nitrifying communities gradually adapt to zinc (Zn) after a single contamination event with reported adaptation times exceeding 1 year. It was hypothesized that this relatively slow adaptation relates to the restricted microbial diversity and low growth rate of the soil nitrifying community. This hypothesis was tested experimentally by recording adaptation rates under varying nitrification activities (assumed to affect growth rates) and by monitoring shifts in community composition. Soils were spiked at various Zn concentrations (0-4000 mg Zn kg⁻¹) and two NH₄⁺-N doses (N1, N2) were applied to stimulate growth. A control series receiving no extra NH₄⁺-N was also included. Soils were incubated in pots under field conditions with free drainage. The pore water Zn concentration at which nitrification was halved (EC50, mg Zn l⁻¹) did not change significantly during 12 months in the control series (without NH₄⁺-N applications), although nitrification recovered after 12 months at the highest Zn dose only. The EC50 after 12 months incubation increased by more than a factor 10 with increasing NH₄⁺-N dose (p < 0.05) illustrating that increased activity accelerates adaptation to Zn. Zinc tolerance tests confirmed the role of Zn exposure, time and NH₄⁺-N dose on adaptation. Zinc tolerance development was ascribed to the AOB community since the AOB/AOA ratio (AOB = ammonia oxidizing bacteria; AOA = ammonia oxidizing archaea) increased from 0.4 in the control to 1.4 in the most tolerant community. Moreover, the AOB amoA DGGE profile changed during Zn adaptation whereas the AOA amoA DGGE profile remained unaffected. These data confirm the slow but pronounced adaptation of nitrifiers to Zn contamination. We showed that adaptation to Zn was accelerated at higher activity and was associated with a shift in soil AOB community that gradually dominated the nitrifying community.     

Effect of tebuthiuron on soil N mineralization and nitrification

Abstract

Herbicides have potential for economical and efficient site preparation following timber harvest. The effects of tebuthiu‐ron, one of the herbicides approved for this use, on soil nitrogen (N) mineralization and nitrification were determined in laboratory incubations. Tebuthiuron was added at rates from 0 to 1000 μg g^‐1 to three soils. There was no effect of tebuthiuron additions of less than 1 μg g^‐1 on soil N mineralization and nitrification. Tebuthiuron reduced nitrification in all soils at 1000 μg g^‐1 and in two of the soils at 100 μg g^‐1 . All soils had increased net mineralization with tebuthiuron added at 100 and 1000 μg g^‐1. The addition of 50 μg NH⁺ ₄‐N and 1000 μg tebuthiuron g^‐1 resulted in increased net mineralization in the three soils. Nitrification was affected differently in each of the three soils by the addition of both NH⁺ ₄‐N and tebuthiuron. The added NH⁺ ₄‐N either removed the inhibition of nitrification by the herbicide or had no effect on the inhibition in two of the soils. In the third soil, nitrification was reduced by the addition of NH⁺ ₄‐N.

The presence of NO^‐ ₃‐N in these acid soils and the effects of added NH⁺ ₄‐N on NO^‐ ₃‐N production suggest that heterotrophic nitrification occurs in at least two of the soils. The findings of this study indicate that any effects of tebuthiuron on N mineralization and nitrification at the currently recommended application rates are likely to be transient and localized.     

Effect of reforestation on turnover of 15N-labelled nitrate and ammonium in relation to changes in soil microflora

The effects of incubation time, vegetation type (represented by a pine plantation, a protected and a periodically burnt eucalypt forest), lime and finely ground pine needles on the transformation of (¹⁵NH₄)₂SO₄ and K¹⁵NO₃ were studied in incubation experiments with a sandy lateritic podzolic soil from south-east Queensland. Microorganisms were counted so as to relate N transformations to particular groups of microorganisms.The heterotrophic miroflora utilized NH⁺₄ as a source of N in preference to NO^?₃, and autotrophic nitrifiers seemed to be weak competitors for NH⁺₄. Lime caused a slight loss of NO^?₃ and this was accompanied by an increase in the population of denitrifying bacteria.Lime promoted immobilization of NH⁺₄ by heterotrophic bacteria and subsequent mineralization by nitrifying bacteria, but when pine needles were also added the nitrifiers were suppressed and immobilization by heterotrophic bacteria dominated. Pine needles alone stimulated fungi to immobilize NH⁺₄.While reforestation with exotic pines caused a loss of total-N there was evidence of increased turnover, i.e. more rapid immobilization and nitrification, in pine plantation soils. Prescribed burning also promoted nitrification while reducing total-N.     

Response of soil constituents to freeze-thaw cycles in wetland soil solution

Soil freeze-thaw cycles in the winter-cold zone can substantially affect soil carbon, nitrogen and phosphorus cycling, and deserve special consideration in wetlands of cold climates. Semi-disturbed soil columns from three natural wetlands (Carex marsh, Carex marshy meadow and Calamagrostis wet grassland) and a soybean field that has been reclaimed from a wetland were exposed to seven freeze-thaw cycles. The freeze-thaw treatments were performed by incubating the soil columns at −10 °C for 1 d and at 5 °C for 7 d. The control columns were incubated at 5 °C for 8 d. After each freeze-thaw cycle, the soil solution was extracted by a solution extractor installed in each soil layer of the soil column, and was analyzed for dissolved organic carbon (DOC), NH₄⁺-N, NO₃⁻-N and total dissolved phosphorus (TDP). The results showed that freeze-thaw cycles could increase DOC, NH₄⁺-N and NO₃⁻-N concentrations in soil solutions, and decrease TDP concentrations. Moreover, the changes of DOC, NH₄⁺-N, NO₃⁻-N and TDP concentrations in soil solutions caused by freeze-thaw cycles were different in various sampling sites and soil layers. The increments of DOC concentrations caused by freeze-thaw cycles were greater in the wetland soil columns than in the soybean field soil columns. The increments of NH₄⁺-N concentrations caused by freeze-thaw cycles decreased with the increase of soil depth. The depth variation in the increments of NO₃⁻-N concentrations caused by freeze-thaw cycles in the wetland soil columns was different from that in the soybean field soil columns. The decrements of TDP concentrations caused by freeze-thaw cycles were greater in columns of Carex marsh and Carex marshy meadow than in columns of Calamagrostis wet grassland and the soybean field. The study results provide information on the timing of nutrient release related to freezing and thawing in natural versus agronomic soils, and have implications for the timing of nutrient application in farm fields in relation to water quality protection.     

Microbial populations immobilizing NH4-N and NO3-N differ in their sensitivity to sodium chloride salinity in soil

An incubation experiment was conducted to study the response to sodium chloride (NaCl) salinity of microbial population immobilizing NH₄⁺- and NO₃⁻-N using glucose as an easily oxidizable C source. Immobilization of NH₄⁺-N was faster than that of NO₃⁻-N and was complete within 12 h of -incubation. Presence of NaCl retarded the process of N immobilization; that of NO₃⁻-N being more affected. Remineralization of immobilized N started within 48 h in case of both NH₄⁺- and NO₃⁻-N and was faster for the latter. Both remineralization and nitrification were significantly delayed in the presence of NaCl; inhibition being more at 4000 mg NaCl kg⁻¹ soil. The inhibitory effect of NaCl on remineralization of N was relatively more for NH₄⁺-treated soil. The results of the study suggested a higher sensitivity to NaCl of microorganisms assimilating NO₃⁻. However, remineralization of N from NO₃⁻-assimilating microbial population was less affected by NaCl salinity compared to NH₄⁺-assimilating population.     

Dynamics of carbon and nitrogen in an extreme alkaline saline soil: A review

The soil of the former lake Texcoco is an ‘extreme’ alkaline saline soil with pH > 10 and electrolytic conductivity (EC) > 150 dS m⁻¹. These conditions have created a unique environment. Application of wastewater sludge to Texcoco soil showed that large amounts of NH₄⁺ were immobilized, NO₃⁻ was reduced aerobically, NO₂⁻ was formed and the mineralization of the organic material in the sludge was inhibited. A series of experiments were initiated to study the processes that inhibited the decomposition of organic material and affected the dynamics of mineral N. The large EC and pH inhibited the decomposition of easily decomposable organic material such as glucose and maize, although cellulolytic activity was observed in soil with pH 9.8 and EC 32.7 dS m⁻¹. The high soil pH favoured NH₃ volatilization of approximately 50 mg N kg⁻¹ soil within a day and a similar amount could be fixed on the soil matrix due to the dispersed minerals and their volcanic origin. Soil microorganisms immobilized large amounts of NH₄⁺ within a day when glucose was added to soil in excess of what was required for metabolic activity. Removal of NO₃⁻ from soil amended with glucose was not inhibited by 100% O₂ and NH₄⁺ indicating that the contribution of denitrification and assimilatory reduction to the reduction of NO₃⁻ was minimal while the formation of NO₂⁻ was not inhibited by 0.1% acetylene, known to inhibit nitrification. Additionally, the reduction of NO₃⁻ in the glucose-amended alkaline saline Texcoco soil was followed by an increase in the amount of NH₄⁺, which could not be due to denitrification. It was concluded that the reduction of NO₃⁻ and the formation of NO₂⁻ and NH₄⁺ in the glucose-amended soil was a result of aerobic NO₃⁻ reduction. A phylogenetic analysis of the archaeal community in the soil of the former lake Texcoco showed that some of the clones identified were capable of reducing NO₃⁻ aerobically to NO₂⁻ when glucose was added. A study of the diversity of the bacterial dissimilatory and respiratory nitrate-reducing communities indicated that bacteria could have contributed to the process.     

Nitrification in soils incubated with pig slurry

Incubation studies (5 weeks at 30°C) of nitrification were made in an acid (pH 5.8) and a neutral (pH 7.1) soil receiving varying concentrations of pig slurry and (NH₄)₂SO₄ solution. Mineral-N and pH changes were observed at weekly intervals and inorganic salts media were used to obtain separate estimates of the numbers of NH₄-N- and NO₂-N-oxidizing bacteria. In the acid soil, pig slurry NH₄-N was nitrified to a greater extent than (NH₄)₂SO₄. In the neutral soil, slurry additions resulted in the accumulation of NO₂^?-N and, in one case, the complete inhibition of nitrification for 4 weeks. Slurry raised the pH of both soils more than (NH₄)₂SO₄ and nitrification in the acid soil was most rapid in a 2 week period of elevated pH following slurry applications. Numbers of Nitroxomonas isolated from the acid soil were considered high enough to account for NH₄-N oxidation in slurry-treated samples. Numbers of nitrifiers recovered from the incubated neutral soil samples were variable but frequently high enough (>10⁴/g dry soil) to account for observed rates of nitrification. Results are discussed in relation to heterotrophic nitrification in soils, and the practical implications of spreading slurry on agricultural land.     

Sources of spatial and temporal variability of inorganic nitrogen in pure and mixed deciduous temperate forests

We investigated the influence of tree canopy composition and structure on the spatial and temporal variability of (i) concentrations of inorganic N (NH₄⁺ and NO₃⁻) and (ii) net N-mineralization and net nitrification, within the temperate forest floor. We compared a pure European beech stand (PS) with a mixed beech-hornbeam one (MS). Three sampling areas were chosen in each stand. Within the PS, the tree locations represented a decreasing gradient of light intensity reaching the forest floor. Within the MS they represented a gradient in the amount of hornbeam leaves present in the litter. In the field NH₄⁺ and NO₃⁻ concentrations were measured in the upper mineral soil (UMS) and the overlying organic layers (OL and OF+OH). Field exposures using buried bags were carried out on UMS over 1 year to measure in situ net N-mineralization and net nitrification. Potential net N-mineralization and net nitrification were investigated in summer with UMS, OL and OF+OH incubated at 28 °C for 28 days in the laboratory. We hypothesize that with the presence of a mull-forming species (hornbeam) within a stand dominated by a moder-forming one (European beech), (i) the spatial and (ii) temporal patterns of soil inorganic N concentrations, net N-mineralization and net nitrification would be different in the two stands. Our main results show that tree species composition has an influence on both spatial and temporal patterns of nitrification. The PS exhibited its highest peaks of UMS NO₃⁻ concentration and net nitrification in spring and early summer while they were highest in the MS in winter. Furthermore, PS exhibited a higher rate of net nitrification than MS. We discuss this unexpected result and suggest that dissolved organic C may be the controlling factor for net nitrification in the MS.     

Tropical savannah woodland: effects of experimental fire on soil microorganisms and soil emissions of carbon dioxide

Burning of the vegetation in the African savannahs in the dry season is widespread and may have significant effects on soil chemical and biological properties. A field experiment in a full factorial randomised block design with fire, ash and extra grass biomass as main factors was carried out in savannah woodland of the Gambella region in Ethiopia. The microbial biomass C (C_mic) was 52% (fumigation-extraction) and 20% (substrate-induced respiration) higher in burned than unburned plots 12 d after burning. Both basal respiration and potential denitrification enzyme activity (PDA) immediately responded to burning and increased after treatment. However, in burned plots addition of extra biomass (fuel load) led to a reduction of C_mic and PDA due to enhanced fire temperature. Five days after burning, there was a short-lived burst in the in situ soil respiration following rainfall, with twice as high soil respiration in burned than unburned plots. In contrast, 12 d after burning soil respiration was 21% lower in the burned plots, coinciding with lower soil water content in the same plots. The fire treatment resulted in higher concentrations of dissolved organic C (24-85%) and nitrate (47-76%) in the soil until 90 d after burning, while soil NH₄⁺-N was not affected to the same extent. The increase in soil NO₃⁻-N but not NH₄⁺-N in the burned plots together with the well-aerated soil conditions indicated that nitrifying bacteria were stimulated by fire and immediately oxidised NH₄⁺-N to NO₃⁻-N. In the subsequent rainy season, NO₃⁻-N and, consequently, PDA were reduced by ash deposition. Further, C_mic was lower in burned plots at that time. However, the fire-induced changes in microbial biomass and activity were relatively small compared to the substantial seasonal variation, suggesting transient effects of the low severity experimental fire on soil microbial functioning.