Net microbial amino sugar accumulation process in soil as influenced by different plant material inputs

Identifying the impact of plant material inputs on soil amino sugar synthesis may advance our knowledge of microbial transformation processes in soils. In a 12-week laboratory microcosm incubation, 1, 2, 4, and 6% (w/w) soybean leaf or maize stalk were initially added to soil, respectively, whereas soil without plant addition was used as a control. The results showed that adding organic materials to the soil led to a net accumulation of amino sugars, because of greater microbial synthesis. The ratios of glucosamine to galactosamine and of glucosamine to muramic acid, two indicators differentiating the relative contribution to soil organic matter of fungi and bacteria, showed substantial variance across the gradient of substrate addition. Our results suggest that the amount of nutrients in a given substrate is the primary attribute determining microbial net accumulation of soil amino sugars, especially in the relatively short term, whereas the composition of nutrients might be more important in the relatively long term when nutrients are not sufficient. The use of the two ratios (glucosamine to galactosamine and glucosamine to muramic acid) reflects different dynamics of galactosamine and muramic acid during the decomposition of organic substrates in soils. Muramic acid, compared with galactosamine, is more likely to accumulate in the soil active organic fraction under abundant nutrient conditions, whereas it would be decomposed along with active organic matter when the nutrients are scarce and remain in minor quantities in the clay fraction without being attacked by microbes.     

Microbial colonisation of roots as a function of plant species

Fifteen plants species were grown in the greenhouse on the same soil and sampled at flowering to obtain rhizosphere soil and root material. In both fractions, the data on fungal and bacterial tissue obtained by amino sugar analysis were compared with the total microbial biomass based on fumigation-extraction and ergosterol data. The available literature on glucosamine concentrations in fungi and on muramic acid concentrations in bacteria was reviewed to prove the possibility of generating conversion values for general use in root material. All microbial properties analysed revealed strong species-specific differences in microbial colonisation of plant roots. The root material contained considerable amounts of microbial biomass C and biomass N, reaching mean levels of 10.9 and 1.4 mg g⁻¹ dry weight, respectively. However, the majority of CHCl₃ labile C and N, i.e. 89 and 55% was root derived. The average amount of ergosterol was 13 μg g⁻¹ dry weight and varied between 0.0 for Phacelia roots and 45.5 μg g⁻¹ dry weight for Vicia roots. The ergosterol content in root material of mycorrhizal and non-mycorrhizal plant species did not differ significantly. Fungal glucosamine was converted to fungal C by multiplication by 9 giving a range of 7.1-25.9 mg g⁻¹ dry weight in the root material. Fungal C and ergosterol were significantly correlated. Bacterial C was calculated by multiplying muramic acid by 45 giving a range from 1.7 to 21.6 mg g⁻¹ dry weight in the root material. In the root material of the 15 plant species, the ratio of fungal C-to-bacterial C ranged from 1.0 in mycorrhizal Trifolium roots to 9.5 in non-mycorrhizal Lupinus roots and it was on average 3.1. These figures mean that the microbial tissue in the root material consists on average of 76% fungal C and 24% bacterial C. The differences in microbial colonisation of the roots were reflected by differences in microbial indices found in the rhizosphere soil, most strongly for microbial biomass C and ergosterol, but to some extent also for glucosamine and muramic acid.     

Shifts in amino sugar and ergosterol contents after addition of sucrose and cellulose to soil

An incubation experiment with organic soil amendments was carried out with the aim to determine whether formation and use of microbial tissue (biomass and residues) could be monitored by measuring glucosamine and muramic acid. Living fungal tissue was additionally determined by the cell-membrane component ergosterol. The organic amendments were fibrous maize cellulose and sugarcane sucrose adjusted to the same C/N ratio of 15. In a subsequent step, spherical cellulose was added without N to determine whether the microbial residues formed initially were preferentially decomposed. In the non-amended control treatment, ergosterol remained constant at 0.44 μg g⁻¹ soil throughout the 67-day incubation. It increased to a highest value of 1.9 μg g⁻¹ soil at day 5 in the sucrose treatment and to 5.0 μg g⁻¹ soil at day 33 in the fibrous cellulose treatment. Then, the ergosterol content declined again. The addition of spherical cellulose had no further significant effects on the ergosterol content in these two treatments. The non-amended control treatment contained 48 μg muramic acid and 650 μg glucosamine g⁻¹ soil at day 5. During incubation, these contents decreased by 17% and 19%, respectively. A 33% increase in muramic acid and an 8% increase in glucosamine were observed after adding sucrose. Consequently, the ratio of fungal C to bacterial C based on bacterial muramic acid and fungal glucosamine was lowered in comparison with the other two treatments. No effect on the two amino sugars was observed after adding cellulose initially or subsequently during the second incubation period. This indicates that the differences in quality between sucrose and cellulose had a strong impact on the formation of microbial residues. However, the amino sugars did not indicate a preferential decomposition of microbial residues as N sources.     

尿素向氨基糖的转化以及对土壤氨基糖库动态的影响

采用13CO(NH2)2为底物进行黑土培养实验,利用气相色谱/质谱技术测定土壤中三种氨基糖含量以及同位素富集比例,根据其微生物标识物作用探讨土壤中不同微生物群落对于尿素碳的同化利用特征及黑土氨基糖库对于尿素添加的响应。研究结果表明,尿素碳可以被土壤微生物同化利用,但是可利用性显著低于葡萄糖。氨基葡萄糖中13C富集比例显著高于胞壁酸,表明真菌对尿素碳的同化能力高于细菌。尿素添加使土壤有机碳含量有所下降,同时土壤氨基糖总量及其与有机碳的相对比例也显著降低,说明在碳源严重受限条件下,氨基糖可被优先分解利用以补充碳源供给。胞壁酸含量虽低,但其调节并平衡碳氮元素供给与需求的能力较强;氨基葡萄糖稳定性高于胞壁酸,但在碳源缺乏时也可部分分解。土壤氨基糖的动态与土壤碳氮的可利用性及其耦合作用密切相关,在平衡土壤碳氮需求方面具有一定的调节作用。     

Preferential sequestration of microbial carbon in subsoils of a glacial-landscape toposequence, Dane County, WI, USA

Microorganisms participate in soil carbon storage by contributing biomass in the form of refractory microbial cell components. However, despite the important contribution of microbial biomass residues to the stable carbon pool, little is known about how the contribution of these residues to soil carbon storage varies as a function of depth. In this study, we evaluated microbial residue biomarkers (amino sugars) in varied pedogenic horizons from six soil profiles of two geographic sites on a glacial-landscape toposequence in Dane County, WI. We found that the amino sugars appeared to preferentially accumulate in subsoil. Specifically, although total amounts of amino sugars decreased downward through the profile as even as total organic carbon did, the rate of decrease was significantly lower, suggesting that these compounds are more refractory than general soil organic carbon. The proportion of amino sugars to soil organic carbon increased along the depth gradient (from top to bottom), with the exception of Bg horizons associated with high water tables. We also observed that microbial residue patterns measured by amino sugar ratio (e.g., glucosamine to muramic acid) showed different dynamic tendencies in the two different geographic sites, suggesting that residue carbon contribution by fungi and bacteria is likely site-specific and complex. In summary, regardless of the redox microenvironment created by groundwater dynamics in a given soil, our study supports the hypothesis that microbial residues are refractory and that they contribute to terrestrial carbon sequestration.     

Land use effects on amino sugar signature of chromic Luvisol in the semi-arid part of northern Tanzania

 Characterizing amino sugar signature in particle size separates of tropical soils is important for further understanding the fate of microbial-derived compounds during the decomposition of soil organic matter (SOM) in tropical agroecosystems. We investigated the impact of land-use changes on the nature, amount and dynamics of amino sugars in soil of the semi-arid northern Tanzania. Samples were collected from the uppermost 10 cm of native woodland, degraded woodland, fields cultivated for 3 and 15 years and homestead fields fertilized with animal manure. The amount of glucosamine, galactosamine, mannosamine and muramic acid were determined in bulk soil and size separates. Compared to the native woodland, a 68% and 72% reduction in total amino sugar contents were found in the 3- and 15-year cultivated fields, respectively. Moreover, 39% of the total amino sugar was lost from the degraded woodland. This may be attributed to accelerated decomposition of amino sugars and/or decreasing microbial biomass input under the semi-arid environment following clear-cutting and cultivation. In contrast, only a 20% decline was found from the fields where animal manure had been applied. Most of the amino sugar depletion occurred from the coarse and fine sand-associated SOM. The decline from the silt and clay-bound amino sugar was relatively small, indicating the importance of organo-mineral associations in the stabilization of microbial-derived sugars in this tropical soil. After 15 years of continuous cultivation, the ratio of glucosamine:galactosamine increased from 1.44 to 2.23, while the ratio of glucosamine:muramic acid increased from 14.5 to 26.5 (P<0.05). These results suggest that cultivation may have led to preferential depletion of bacterial-derived amino sugars (muramic acid and galactosamine) compared with fungal-derived glucosamine. Received: 22 June 2000     

Amino sugars as specific indices for fungal and bacterial residues in soil

Amino sugars are important indices for the contribution of soil microorganisms to soil organic matter. Consequently, the past decade has seen a great increase in the number of studies measuring amino sugars. However, some uncertainties remain in the interpretation of amino sugar data. The objective of the current opinion paper is to summarize current knowledge on amino sugars in soils, to give some advice for future research objectives, and to make a plea for the correct use of information. The study gives an overview on the origin of muramic acid (MurN), glucosamine (GlcN), galactosamine (GalN), and mannosamine (ManN). Information is also provided on measuring total amino sugars in soil but also on compound-specific δ¹³C and δ¹⁵N determination. Special attention is given to the turnover of microbial cell-wall residues, to the interpretation of the GlcN/GalN ratio, and to the reasons for converting fungal GlcN and MurN to microbial residue C. There is no evidence to suggest that the turnover of fungal residues generally differs from that of bacterial residues. On average, MurN contributes 7% to total amino sugars in soil, GlcN 60%, GalN 30%, and ManN 4%. MurN is highly specific for bacteria, GlcN for fungi if corrected for the contribution of bacterial GlcN, whereas GalN and ManN are unspecific microbial markers.     

Amino sugars in soils of the North American cultivated prairie

Characterizing amino sugar dynamics in cultivated soils helps to further understand the influence of cultivation on soil organic matter turnover. This study was designed to evaluate accumulations and patterns of four amino sugars in 17 surface (0–10 cm) soil samples along a climosequence in the North American long-term cultivated prairie from Saskatoon, Candada, to Texas, USA. Mean annual temperature (MAT) ranged from 0.9 to 22.2°C and mean annual precipitation (MAP) from 300 to 1308 mm. Samples were analyzed for glucosamine, mannosamine, galactosamine, and muramic acid. Amino sugar contents (mg kg^?1 soil) varied markedly among the 17 sites and were controlled by mean annual temperature (MAT) and clay and silt contents, mainly. The relationship between amino sugar-N proportions to total N (%) and MAT followed parabolic regression models. Compared with native sites, amino sugars were depleted by 53% and the amino sugar-N by 18% of the total, on average, after long-term cropping. The intensity of amino sugar-N depletion correlated positively with MAT (r = 0.77^***). Bacterially-derived galactosamine and muramic acid declined preferentially to mainly chitin-derived glucosamine after long-term cropping. The glucosamine-to-galactosamine and glucosamine-to-muramic acid ratios can be used, therefore, as indicators for the identification of land use effects on microbially-derived SOM residues.     

Land-use effects on amino sugars in particle size fractions of an Argiudoll

Identifying amino sugar pools from different land-use systems may advance our knowledge of land-use effects on the fate of microbially-derived substances. Surface soils (0–10 cm) from (1) native pasture, (2) a >80-years-arable site, and (3) a >80-years-afforested site were fractionated into clay, silt, fine-, and coarse-sand fractions. Then, soil organic carbon, N, glucosamine, galactosamine, mannosamine, and muramic acid were analyzed.Afforestation did not influence the amino sugar content in bulk soil, whereas cultivation reduced the content by 54%. The concentrations of amino sugars in g kg⁻¹ SOM declined after both long-term cropping and afforestation by 6% and 13%, respectively, relative to that in the grassland. The amino sugar depletion at the forest site occurred mainly from the silt fraction (by 25%), while that in the cultivated site was mainly due to preferential loss of amino sugars from clay (by 19% compared with the grassland). Both ratios of glucosamine to galactosamine and glucosamine to muramic acid increased when the prairie was converted to forest or cultivated land, suggesting that bacterial N especially is better preserved than fungal N under prairie conditions.     

Temporal responses of soil microorganisms to substrate addition as indicated by amino sugar differentiation

Amino sugars are one of the important microbial residue biomarkers which are associated with soil organic matter cycling. However, little is known about their transformation kinetics in response to available substrates because living biomass only contributes a negligible portion to the total mass of amino sugars. By using ¹⁵N tracing technique, the newly synthesized (labeled) amino sugars can be differentiated from the native portions in soil matrix, making it possible to evaluate, in quantitative manner, the transformation pattern of amino sugars and to interpret the past and ongoing changes of microbial communities during the assimilation of extraneous ¹⁵N. In this study, laboratory incubations of soil samples were conducted by using ¹⁵NH₄⁺ as nitrogen source with or without glucose addition. Both the ¹⁵N enrichment (expressed as atom percentage excess, APE) and the contents of amino sugars were determined by an isotope-based gas chromatography-mass spectrometry. The significant ¹⁵N incorporation into amino sugars was only observed in glucose plus ¹⁵NH₄⁺ amendment with the APE arranged as: muramic acid (MurN) > glucosamine (GlcN) > galactosamine (GalN). The dynamics of ¹⁵N enrichment in bacterial-derived MurN and fungal-derived GlcN were fitted to the hyperbolic equations and indicative for the temporal responses of different soil microorganisms. The APE plateau of MurN and fungal-derived GlcN represented the maximal extent of bacterial and fungal populations, respectively, becoming active in response to the available substrates. The different dynamics of the ¹⁵N enrichment between MurN and GlcN indicated that bacteria reacted faster than fungi to assimilate the labile substrates initially, but fungus growth was dominant afterward, leading to integrated microbial community structure over time. Furthermore, the dynamics of labeled and unlabeled portions of amino sugars were compound-specific and substrate-dependent, suggesting their different stability in soil. GlcN tended to accumulate in soil while MurN was more likely degraded as a carbon source when nitrogen supply was excessive.     

Abundance, production and stabilization of microbial biomass under conventional and reduced tillage

Soil tillage practices affect the soil microbial community in various ways, with possible consequences for nitrogen (N) losses, plant growth and soil organic carbon (C) sequestration. As microbes affect soil organic matter (SOM) dynamics largely through their activity, their impact may not be deduced from biomass measurements alone. Moreover, residual microbial tissue is thought to facilitate SOM stabilization, and to provide a long term integrated measure of effects on the microorganisms. In this study, we therefore compared the effect of reduced (RT) and conventional tillage (CT) on the biomass, growth rate and residues of the major microbial decomposer groups fungi and bacteria. Soil samples were collected at two depths (0-5 cm and 5-20 cm) from plots in an Irish winter wheat field that were exposed to either conventional or shallow non-inversion tillage for 7 growing seasons. Total soil fungal and bacterial biomasses were estimated using epifluorescence microscopy. To separate between biomass of saprophytic fungi and arbuscular mycorrhizae, samples were analyzed for ergosterol and phospholipid fatty acid (PLFA) biomarkers. Growth rates of saprophytic fungi were determined by [¹⁴C]acetate-in-ergosterol incorporation, whereas bacterial growth rates were determined by the incorporation of ³H-leucine in bacterial proteins. Finally, soil contents of fungal and bacterial residues were estimated by quantifying microbial derived amino sugars. Reduced tillage increased the total biomass of both bacteria and fungi in the 0-5 cm soil layer to a similar extent. Both ergosterol and PLFA analyses indicated that RT increased biomass of saprophytic fungi in the 0-5 cm soil layer. In contrast, RT increased the biomass of arbuscular mycorrhizae as well as its contribution to the total fungal biomass across the whole plough layer. Growth rates of both saprotrophic fungi and bacteria on the other hand were not affected by soil tillage, possibly indicating a decreased turnover rate of soil microbial biomass under RT. Moreover, RT did not affect the proportion of microbial residues that were derived from fungi. In summary, our results suggest that RT can promote soil C storage without increasing the role of saprophytic fungi in SOM dynamics relative to that of bacteria.     

Microbial residues as indicators of soil restoration in South African secondary pastures

Prolonged intensive arable cropping of semiarid grassland soils in the South African Highveld resulted in a significant loss of C, N and associated living and dead microbial biomass. To regenerate their soils, farmers converted degraded arable sites back into secondary pastures. The objective of this study was to clarify the contribution of microorganisms to the sequestration of C and N in soil during this regeneration phase. Composite samples were taken from the topsoils of former arable land, namely Plinthustalfs, which had been converted to pastures 1-31 years ago. Amino sugars were determined as markers for microbial residues in the bulk soil and in selected particle-size fractions. The results showed that when C and N contents increased during the secondary pasture usage, the amino sugar concentration in the bulk soil (0-5 cm) recovered at similar magnitude and reached a new steady-state level after approximately 90 years, which corresponded only to 90% of the amino sugar level in the primary grassland. The amino sugar concentration in the clay-sized fraction recovered to a higher end level than in the bulk soil, and also at a faster annual rate. This confirms that especially the finer particles contained a high amount of amino sugars and were responsible, thus, for the restoration of microbially derived C and N. The incomplete recovery of amino sugars in bulk soil can only in parts be attributed to a slightly coarser texture of secondary grassland that had lost silt through wind erosion. The soils particularly had also lost the ability to restore microbial residues below 5 cm soil depth. Overall, the ratios of glucosamine to muramic acid also increased with increasing duration of pasture usage, suggesting that fungi dominated the microbial sequestration of C and N whereas the re-accumulation of bacterial cell wall residues was less pronounced. However, the glucosamine-to-muramic acid ratios finally even exceeded those of the primary grassland, indicating that there remained some irreversible changes of the soil microbial community by former intensive crop management.     

Optimisation of amino sugar quantification by HPLC in soil and plant hydrolysates

Amino sugars are increasingly used as indicators for the accumulation of microbial residues in soil and plant material. A reverse-phase high-performance liquid chromatography method was improved for the simultaneous determination of muramic acid, mannosamine, glucosamine and galactosamine in soil and plant hydrolysates via ortho-phthaldialdehyde (OPA) pre-column derivatisation and fluorescence detection. The retention time was reduced, and the separation of muramic acid and mannosamine was optimised by modifying the mobile phase. The effects of excitation wavelength, OPA reaction time, tetrahydrofuran concentration and pH value of the mobile phase on the amino sugar separation were tested. Quantification limits were in the range of 0.13 to 0.90 μg ml⁻¹. No interferences exist from amino acids or other primary amines, occurring in soil and plant hydrolysates.     

Hydrolase activity, microbial biomass and community structure in long-term Cd-contaminated soils

Long-term effects of high Cd concentrations on enzyme activities, microbial biomass and respiration and bacterial community structure of soils were assessed in sandy soils where Cd was added between 1988 and 1990 as Cd(NO₃)₂ to reach concentrations ranging from 0 to 0.36 mmol Cd kg⁻¹ dry weight soil. Soils were mantained under maize and grass cultivation, or ‘set-aside’ regimes, for 1 year. Solubility of Cd and its bioavailability were measured by chemical extractions or by the BIOMET bacterial biosensor system. Cadmium solubility was very low, and Cd bioavailability was barely detectable even in soils polluted with 0.36 mmol Cd kg⁻¹. Soil microbial biomass carbon (B_C) was slightly decreased and respiration was increased significantly even at the lower Cd concentration and as a consequence the metabolic quotient (qCO₂) was increased, indicating a stressful condition for soil microflora. However, Cd-contaminated soils also had a lower total organic C (TOC) content and thus the microbial biomass C-to-TOC ratio was unaffected by Cd. Alkaline phosphomonoesterase, arylsulphatase and protease activities were significantly reduced in all Cd-contaminated soils whereas acid phosphomonoesterase, β-glucosidase and urease activites were unaffected by Cd. Neither changes in physiological groups of bacteria, nor of Cd resistant bacteria could be detected in numbers of the culturable bacterial community. Denaturing gradient gel electrophoresis analysis of the bacterial community showed slight changes in maize cropped soils containing 0.18 and 0.36 mmol Cd kg⁻¹ soil as compared to the control. It was concluded that high Cd concentrations induced mainly physiological adaptations rather than selection for metal-resistant culturable soil microflora, regardless of Cd concentration, and that some biochemical parameters were more sensitive to stress than others.     

Microbial residues were increased by film mulching with manure amendment in a semiarid agroecosystem

Amino sugars, as a kind of microbial residue, are strongly associated with cycling of microbial-derived soil organic matter. However, responses of amino sugars to agricultural practices on the Loess Plateau in North-western China are poorly known. The objective was to evaluate effects of film mulching (no film mulching + NPK fertilizers, CK; film mulching + NPK fertilizers, PF; film mulching + NPK fertilizers + cow manure, FM) on accumulations of amino sugars in this region. FM significantly increased total amino sugar by 190.46 mg kg^?1 in 0–10 cm layer and 214.66 mg kg^?1 in 10–20 cm layer relative to CK, but PF significantly decreased it by 139.28 mg kg^?1 in 0–10 cm layer. Ratios of glucosamine to muramic acid were markedly decreased by 2.50 in 0–10 cm layer and 2.28 in 10–20 cm layer in FM than CK, suggesting a tendency of microbial residues pool shift towards bacterial residues in this agroecosystem. These results indicated film mulching alone was not benefitial to accumulation of amino sugar while organic manure contributed to the build-up of amino sugar partly due to manure contained microbial residues. The different patterns of amino sugars suggested significant changes in the quality of microbial-derived organic matter.     

Attempts to derive EC50 values for heavy metals from land-applied Cu-, Ni-, and Zn-spiked sewage sludge

We established a field trial to assess the impacts on soil biological properties of application of heavy metal-spiked sewage sludge, with the aim of determining toxicity threshold concentrations of heavy metals in soil. Plots were treated with sludges containing increasing concentrations of Cu, Ni and Zn in order to raise the metal concentrations in the soil by 0-200 mg Cu kg⁻¹, 0-60 mg Ni kg⁻¹ and 0-400 mg Zn kg⁻¹, and were then cultivated and sown in ryegrass-clover pasture and monitored annually for 6 years. All biological properties measured (soil basal respiration, microbial biomass C, and sulphatase enzyme activities), except phosphatase activity, increased in all plots over the duration of the experiment. Consequently, it was only possible to assess effects of heavy metals across time if, each year, all data for each metal were normalised by expressing them as percentages of the activities measured in an un-sludged control plot. When this was done, no significant effects of increasing heavy-metal concentrations on basal respiration, microbial biomass C or respiratory quotient (qCO₂) were observed, although total Cu and soil solution Cu were significantly negatively related to microbial biomass C when it was expressed as a proportion of soil total C. None of the properties measured were affected by increasing Ni concentrations. Phosphatase and sulphatase activities were significantly negatively related to increasing Zn concentrations, but not usually to increasing Cu unless they were expressed as a proportion of total C. A sigmoidal dose-response model was used to calculate EC₂₀ and EC₅₀ values using the normalised data, but generally, the model parameters had very large 95% confidence intervals and/or the fits to the model had small R² values. The factors primarily responsible for confounding these results were site and sample variations not accounted for by the normalisation process and the absence of any data points at metal concentrations beyond the calculated EC₅₀ values. In the few instances where reasonable EC₂₀ values could be calculated, they were relatively consistent across properties, e.g., EC₂₀ for total Zn and phosphatase (330 mg kg⁻¹), total Zn and sulphatase (310 mg kg⁻¹), and EC₂₀ for total Cu and sulphatase (140 mg kg⁻¹) and total Cu and microbial biomass C (140 mg kg⁻¹), when both sulphatase and microbial biomass C were expressed as a proportion of total C. Our results suggest that Cu and Zn at the upper concentrations used in this experiment were possibly having adverse effects on some soil biological properties. However, much higher metal concentrations will be needed to accurately calculate EC₂₀ and EC₅₀ and this may not be easily achievable without many applications of sewage sludge, even if the sludge is spiked with heavy metals.     

Biochemical characterization of urban soil profiles from Stuttgart, Germany

The knowledge of biochemical properties of urban soils can help to understand nutrient cycling in urban areas and provide a database for urban soil management. Soil samples were taken from 10 soil profiles in the city of Stuttgart, Germany, differing in land use—from an essentially undisturbed garden area to highly disturbed high-density and railway areas. A variety of soil biotic (microbial biomass, enzyme activities) and abiotic properties (total organic C, elemental C, total N) were measured up to 1.9 m depth. Soil organic matter was frequently enriched in the subsoil. Microbial biomass in the top horizons ranged from 0.17 to 1.64 g C kg⁻¹, and from 0.01 to 0.30 g N kg⁻¹, respectively. The deepest soil horizon at 170-190 cm, however, contained 0.12 g C kg⁻¹ and 0.05 kg N kg⁻¹ in the microbial biomass. In general, arylsulphatase and urease activity decreased with depth but in three profiles potentially mineralizable N in the deepest horizons was higher than in soil layers directly overlying. In deeply modified urban soils, subsoil beside topsoil properties have to be included in the evaluation of soil quality. This knowledge is essential because consumption of natural soils for housing and traffic has to be reduced by promoting inner city densification.     

Elevated CO2 does not favor a fungal decomposition pathway

We examined the effect of prolonged elevated CO₂ on the concentration of fungal- and bacterial-derived compounds by quantifying the soil contents of the amino sugars glucosamine, galactosamine and muramic acid. Soil samples were collected from three different terrestrial ecosystems (grassland, an aspen forest and a soybean/corn agroecosystem) that were exposed to elevated CO₂ under FACE conditions for 3-10 years. Amino sugars were extracted from bulk soil and analyzed by gas chromatography. Elevated CO₂ did not affect the size or composition of the amino sugar pool in any of the systems. However, high rates of fertilizer N applications decreased the amount of fungal-derived residues in the grassland system. We suggest that these results are caused by a decrease in saprophytic fungi following high N additions. Furthermore, our findings imply that the contribution of saprophytic fungi and bacteria to SOM in the studied ecosystems is largely unaffected by elevated CO₂.     

外源氮添加对土壤微生物残体积累动态的影响－基于Meta分析

微生物残体是土壤有机碳库的重要贡献者。为明确外源氮添加对土壤微生物残体积累动态的影响,本文收集整理了1980—2020年已发表的文献,共选取122组试验观测数据,利用整合分析方法（Meta-analysis）,以微生物残体标识物－氨基糖为目标组分,定量分析了不同种类和数量的外源氮添加对土壤中微生物来源细胞残体积累数量和组成比例的影响,并系统解析其主要影响因素。结果表明:外源氮添加（0 ~ 6000 kg hm?1）对微生物细胞残体的积累有显著的促进作用,并能引起土壤中真菌和细菌来源细胞残体相对比例发生明显变化。与不加氮对照相比,氮添加使土壤氨基糖总量增加27%,其中氨基葡萄糖、氨基半乳糖和胞壁酸含量分别增加22.5%、29.8%和19.0%。同时,不同种类外源氮素添加对氨基糖积累特征的影响也有所不同,表现为有机氮（如动物厩肥）比无机氮添加对氨基糖积累的促进作用更大。此外,氮添加对氨基糖的影响程度还与土壤自身的碳氮比、土地利用类型和自然降雨量等环境因子密切相关。其中是否添加碳源对微生物残体的响应有较大影响,表现为:无碳源添加会降低土壤氨基糖葡萄糖和胞壁酸对氮添加的响应,削弱了微生物残体对土壤有机质的贡献比例;而氮源同时配合碳源添加条件下,土壤氨基糖积累量显著高于单一氮源添加的处理,说明氮添加对微生物残体积累的影响存在着碳氮耦合效应。     

Labile, recalcitrant, and microbial carbon and nitrogen pools of a tallgrass prairie soil in the US Great Plains subjected to experimental warming and clipping

Carbon (C) and nitrogen (N) fluxes are largely controlled by the small but highly bio-reactive, labile pools of these elements in terrestrial soils, while long-term C and N storage is determined by the long-lived recalcitrant fractions. Changes in the size of these pools and redistribution among them in response to global warming may considerably affect the long-term terrestrial C and N storage. However, such changes have not been carefully examined in field warming experiments. This study used sulfuric acid hydrolysis to quantify changes in labile and recalcitrant C and N fractions of soil in a tallgrass prairie ecosystem that had been continuously warmed with or without clipping for about 2.5 years. Warming significantly increased labile C and N fractions in the unclipped plots, resulting in increments of 373 mg C kg⁻¹ dry soil and 15 mg N kg⁻¹ dry soil, over this period whilst clipping significantly decreased such concentrations in the warmed plots. Warming also significantly increased soil microbial biomass C and N in the unclipped plots, and increased ratios of soil microbial/labile C and N, indicating an increase in microbial C- and N-use efficiency. Recalcitrant and total C and N contents were not significantly affected by warming. For all measured pools, only labile and microbial biomass C fractions showed significant interactions between warming and clipping, indicating the dependence of the warming effects on clipping. Our results suggest that increased soil labile and microbial C and N fractions likely resulted indirectly from warming increases in plant biomass input, which may be larger than warming-enhanced decomposition of labile organic compounds.