Influence of temperature on the motility of Pseudomonas oryzihabitans and control of Globodera rostochiensis

The motility and efficacy of Pseudomonas oryzihabitans as a biocontrol agent against the potato cyst nematode Globodera rostochiensis were studied with respect to temperature. The influence of soil moisture on bacterial movement was also tested. In a closed container trial, P. oryzihabitans significantly reduced invasion of second stage juveniles (J2) of G. rostochiensis in potato roots, its effect being more marked at 25 and 21 °C than at 17 °C. P. oryzihabitans motility in vitro was optimal at 26 °C and inhibited at temperatures below 18 °C. In soil, both temperature and matric potential affected bacterial movement. At 16 °C its movement and survival were suppressed, but they were unaffected at 25 °C. At both temperatures the biocontrol agent moved faster in the wetter (−0.03 MPa) than in the drier soil (−0.1 MPa). These results suggest that temperature is a key factor in determining the potential of P. oryzihabitans as a biocontrol agent.     

Recovery of reproduction after drought in the soil living Folsomia candida (Collembola)

Soil dwelling (euedaphic) Collembola have evolved to live in soil pores where the atmosphere is saturated with water vapour. Here we show that reproduction in the euedaphic Folsomia candida ceases during drought where soil water potentials are lower than −7 bar (∼99.4% RH). Recovery of the moulting cycle after cessation of drought showed increasing delay with increasing previous drought pressure. However, reproduction was rapidly resumed. Only in F. candida recovering from the most severe drought (−55 bar, 96% RH) was the time lapse between drought and resumed reproduction significantly different from the control (99.4% RH). Furthermore, the final numbers of eggs were unaffected by the degree of drought exposure. Hence, these results suggest that while even very mild drought will stop the reproductive cycle, subsequent recovery is rapid and complete.     

The re-expansion and improving status of the silver-spotted skipper butterfly (Hesperia comma) in Britain: a metapopulation success story

Many specialist species are declining as a result of habitat loss and fragmentation, such that conservation actions typically aim to stem rates of decline rather than bring about genuine recovery. Here, we document the recovery of a species from former population refuges. An extensive survey of the entire British range of Hesperia comma, conducted in 2000, recorded over three times the number of tetrads (2 km × 2 km grid squares) occupied in 1982. This was accompanied by a fourfold increase in the number of populations and a 10-fold increase in the habitat area occupied. The improving status of H. comma is the product of good habitat management, recovering rabbit populations and climate warming, which have improved the quality, and increased the availability, of suitable habitat. This has enabled remnant metapopulations to expand, via distance-dependent colonisation, through large networks of habitat. Metapopulation recovery in H. comma demonstrates that landscape-scale conservation can be successful.     

Spatial distribution of spiders and epedaphic Collembola in an environmentally heterogeneous forest floor habitat

Describing the biotic and abiotic processes that are responsible for the formation of spatial patterns in predators and their prey is crucial for improving our understanding of food–web interactions. We studied the spatial distribution of four abundant spider species and three common groups of epedaphic Collembola prey in a beech-dominated (Fagus sylvatica) forest floor habitat and related the observed patterns to environmental heterogeneity, overall predator activity (all ground beetles and spiders) and prey availability (all Collembola) at the local scale. Spiders and epedaphic Collembola were sampled over 392 days in a spatially explicit design based on a regular grid of 25 pitfall traps (inter-trap distance 100 m). Environmental heterogeneity was characterized by cover of moss and litter as well as the amount of dead wood at each trap location. We first used the index of dispersion to characterize the spatial distribution of spider species and Collembola and then related the observed patterns to environmental heterogeneity, predator and prey availability while testing for spatial autocorrelation within the same models. All taxa were significantly more aggregated than expected from the assumption of random distribution. The distribution of spider species was positively (Coelotes terrestris) or negatively (Tenuiphantes zimmermanni and Tapinocyba insecta) related to the cover of moss and negatively related to litter cover (C. terrestris) or the local availability of prey (T. insecta). The distribution of Collembola was negatively related to local litter cover (Lepidocyrtus spp.) and positively related to the amount of medium deadwood pieces (all other Entomobryidae). Our study suggests that none of the spider species preferred areas of low overall predator activity density. Moreover, it does not indicate association of spider species to prey-rich areas at the analyzed scale of 100 m. It further highlights the importance of environmental heterogeneity, as different habitat properties differentially affected the local activity density of spiders and Collembola and thus considerably contributed to the understanding of distribution patterns.     

Effects of Medicago sativa, Taraxacum officinale and Bromus sterilis on the density and diversity of Collembola in grassy arable fallows of different ages

The density and diversity of Collembola of nine grassy arable fallows of different ages were investigated in a factorial design with the factors ‘plant species’ (legume: Medicago sativa, herb: Taraxacum officinale, grass: Bromus sterilis) and ‘age class’ (2-3, 6-8 and 12-15 years) including the random effect ‘site’ (1-9). In May 2008, four plots were selected randomly at each fallow. Within each plot five M. sativa, T. officinale and B. sterilis plants were extracted with their associated soil using steel cylinders. The material from each plant species was used for extraction of Collembola and for determination of environmental parameters. Thus, the new aspect of the present study compared to other field studies investigating the relationships between plant and Collembolan communities is the focus on the “micro-scale”, investigating the Collembolan communities of the soil associated with single plants.We found that species richness and density of total and euedaphic Collembola were significantly higher in B. sterilis than in T. officinale samples with the M. sativa samples being intermediate. Fine-root feeding euedaphic Collembola particularly benefited from the higher amount of fine roots in B. sterilis samples. We also discovered that the age of the fallows had no significant influence on the number of Collembolan species and the density of the Collembolan groups. Notably, however, species of the epedaphic genera Lepidocyrtus and Sminthurinus were associated with the 12-15 year-old fallows and presumably benefited from the high number of plant species in the old fallows. Finally, canonical correspondence analysis (CCA) indicated that the soil organic matter content and the microbial biomass, both potential food sources for many Collembolan species, were important structuring forces for the Collembolan communities.     

Assessment of movement patterns in Folsomia candida (Hexapoda: Collembola) in the presence of food

We showed that Folsomia candida (a blind soil-dwelling Collembola) was able to shift from non-directional (random or search strategy) to directional (target-oriented) movements at short distance of food. We measured departure from linearity and access (or not) to food by the springtail according to distance to the target position. Video-records and image analysis were used to obtain numerical data at 0.2 s interval. The probability of food capture within 10 min (maximum duration of the experiment) was negatively related to distance. Two patterns can be observed along successful trajectories in our experimental conditions (22 °C, ambient light, still air), non-directional movement being followed by directional movement when the animals approach food at 25 mm.     

Golden bowerbird (Prionodura newtonia) habitat in past, present and future climates: predicted extinction of a vertebrate in tropical highlands due to global warming

A generalised linear model was used to predict climatically suitable habitat for the golden bowerbird (Prionodura newtonia De Vis), an endemic species of the Wet Tropics of North Queensland. Mean temperature of the coldest quarter and mean precipitation of the wettest quarter were found to be the best habitat predictors. For independent validation data, accuracy was 67% (Kappa statistic, n=30). Past, and future habitats suitable to the golden bowerbird were mapped by altering the temperature and precipitation input to the model. In the current climate, total potential habitat is estimated to be 1564 km², occurring as a number of separate patches with distinct bowerbird subpopulations. Past habitat was most limiting, 406 km², during the Holocene climatic optimum (c. 5000-3600 YBP, +2 °C and +50% rainfall relative to today). With future warming, assuming a 10% decrease in rainfall, potential habitat is reduced to 582 km² (1 °C warming), 163 km² (2 °C warming) and 37 km² (3 °C warming). Thus, global warming in the coming decades is likely to be a significant threat to the survival of this and similar upland and highland species in the tropics.     

Analysis of aggregative behavior of Pseudomonas sp. 30-3 isolated from Antarctic soil

Pseudomonas sp. 30-3, a toluene degrading microorganism isolated from oil-contaminated Antarctic soils, was shown to form aggregated flocs of cells when exposed to temperatures of 22 and 4 °C, with an increase in aggregation at 4 °C. This was speculated to be due to the secretion of an extracellular polymeric substance (EPS), thus protecting the organism from cold or frost damage. The flocs of cells were stained with the Live/Dead BacLight Bacterial Viability kit and found to be viable cells. The EPS was identified by lectin binding analysis to consist of N-acetyl-d-glucosamine and N-acetylneuraminic acid. An enzyme-linked lectinosorbent assay was also carried out to quantify the amount of EPS produced at 37, 22 and 4 °C. Results showed that at 37 °C the amount of EPS secreted was low, but there was little difference in the amount of EPS secreted at 22 and 4 °C by Pseudomonas sp. 30-3.     

Long-term experimental warming reduces soil nematode populations in the McMurdo Dry Valleys, Antarctica

Climate models predict significant future warming in polar regions. In the McMurdo Dry Valleys, Antarctica, projected summer climate warming is expected to increase snow and glacial melt, resulting in higher stream discharge, rising lake levels, and an increase in areas of moist soil, but the potential influence of warming and associated changes in hydrology on the soil ecosystem is poorly understood. To examine the effects of soil warming and changes in the availability of liquid water on populations of soil invertebrates and their habitat, we established a full-factorial warming and water addition experiment at one experimental site in each of the three hydrologic basins of Taylor Valley, Antarctica, and measured responses over 8 years. We hypothesized that an increase in temperature and moisture together would enhance habitat suitability for soil invertebrates thereby increasing abundance, biomass and diversity of the soil animal communities. Instead, warming treatments had an overall negative effect on density and body size of the microbial-feeding nematode Scottnema lindsayae, the dominant animal in the dry valleys, which decreased by 42% in warmed plots. While experimental moisture additions as a single annual pulse had no effect on nematodes, the surface flooding of one site from rapid melting of upslope subsurface ice (the result of an unusual natural warming event) drastically altered soil moisture, salinity, and animal communities; mortality of S. lindsayae increased and densities decreased. This extreme soil wetting event also resulted in an increase in chlorophyll a and populations of Eudorylaimus spp, a nematode species that prefers moist to wet habitats and feeds on soil micro-algae. Our results suggest that warming in the dry valleys could significantly affect soil nematode populations and species composition both directly and indirectly by altering species-specific habitat suitability for soil biota.     

Host status of 10 fungal isolates for two nematode species, Filenchus misellus and Aphelenchus avenae

The classification of nematodes in the family Tylenchidae into plant parasites, plant associates or fungal-feeders for community analyses, have been much discussed by nematode ecologists. For an appropriate classification, fungal-feeding habits in the family need to be studied. To evaluate the host status of 10 fungal isolates for Filenchus misellus (Tylenchidae) and Aphelenchus avenae (Aphelenchida, Aphelenchidae), population growth rates, body length and width and sex ratios of the nematodes were measured after 40-day culture on fungal colonies at 25 °C. For F. misellus, the fungi determined as good hosts were two Basidiomycota fungi (Agaricus bisporus, Coprinus cinereus), three Ascomycota fungi (Chaetomium cochlioides, Chaetomium funicola, Chaetomium globosum) and a plant-pathogenic fungus (Rhizoctonia solani) on the basis of nematode population growth rate and female body length. Interestingly Pleurotus ostreatus, known as a predaceous fungus for the other nematodes, was also a good host for F. misellus. While, for A. avenae, good hosts were four plant-pathogenic fungi (Fusarium oxysporum f. sp. conglutinans, F. oxysporum f. sp. cucumerinum, Pythium ultimum, R. solani) and A. bisporus. A. avenae was trapped and preyed upon by Pleurotus hyphae. In F. misellus, males were 7-21% of adults, but the ratio did not correlate significantly with the population growth rate. In A. avenae, no male occurred. Differences in habitat preference between Filenchus and Aphelenchus were explained on the basis of the host status and habitat preferences of the tested fungi.     

Effects of Collembola on root properties of two competing ruderal plant species

Plant roots compete for nutrients mineralised by the decomposer community in soil. By affecting microbial biomass and activity Collembola influence the nutrient availability to plants. We investigated the effect of Collembola (Protaphorura fimata Gisin) on growth and competition between of two plant species, Cirsium arvense L (creeping thistle) and Epilobium adnatum Griseb. (square-stemmed willow herb), in a laboratory experiment. Two seedlings of each plant species were planted in rhizotrons either in combination or in monoculture (intra- and interspecific competition). Interspecific competition strongly reduced total biomass of C. arvense whereas E. adnatum suffered most from intraspecific competition. Collembola neither affected the competitive relationship of the two plant species nor shoot and root biomass. Although Collembola did not affect total root biomass they influenced root morphology of both plant species. Roots grew longer and thinner and had more root tips in presence of Collembola. Root elongation is generally ascribed to the exploitation of nutrient rich patches in soil. We hypothesise that changes in root morphology in presence of Collembola are due to Collembola-mediated changes in nutrient availability and distribution.     

Internal regulation of reproduction seasonality in earthworm Dendrobaena octaedra (Savigny, 1826) (Lumbricidae, Oligochaeta)

The study was conducted on Dendrobaena octaedra—a small epigeic earthworm species common in different forest types. In the laboratory the P (parent animals collected in forest) and F1 generations were cultured separately in containers filled with 50 g artificial soil. The containers were kept at 15±0.5 °C, 80% humidity and constant artificial light of low intensity. Every month during the 47 months of culture, the animals and cocoons were removed from the soil by washing on a sieve, weighed, and replaced into new soil. Individuals of the F1 generation did not reproduce continuously. Cocoon production was seasonal, despite culture in constant conditions throughout the whole experiment. Reproduction was highest in spring and summer, and dropped in the winter months. Seasonality characterized the fraction of animals reproducing as well as the number of cocoons produced. The observed seasonal changes in the cocoon production of the F1 generation cultured in constant conditions suggest that internal regulation of reproduction may exist in the earthworm D. octaedra. External factors like temperature, moisture, photoperiod or food supply, which could be responsible for seasonality of reproduction were missing.     

Climate change effects on soil arthropod communities from the Falkland Islands and the Maritime Antarctic

Over a 2-year study, we investigated the effect of environmental change on the diversity and abundance of soil arthropod communities (Acari and Collembola) in the Maritime Antarctic and the Falkland Islands. Open Top Chambers (OTCs), as used extensively in the framework of the northern boreal International Tundra Experiment (ITEX), were used to increase the temperature in contrasting communities on three islands along a latitudinal temperature gradient, ranging from the Falkland Islands (51°S, mean annual temperature 7.5 °C) to Signy Island (60°S, ?2.3 °C) and Anchorage Island (67°S, ?3.8 °C). At each island an open and a closed plant community were studied: lichen vs. moss at the Antarctic sites, and grass vs. dwarf shrub at the Falkland Islands. The OTCs raised the soil surface temperature during most months of the year. During the summer the level of warming achieved was 1.7 °C at the Falkland Islands, 0.7 °C at Signy Island, and 1.1 °C at Anchorage Island.The native arthropod community diversity decreased with increasing latitude. In contrast with this pattern, Collembola abundance in the closed vegetation (dwarf shrub or moss) communities increased by at least an order of magnitude from the Falkland Islands (9.0 ± 2 × 10³ ind. m^?2) to Signy (3.3 ± 8.0 × 10⁴ ind. m^?2) and Anchorage Island (3.1 ± 0.82 × 10⁵ ind. m^?2). The abundance of Acari did not show a latitudinal trend.Abundance and diversity of Acari and Collembola were unaffected by the warming treatment on the Falkland Islands and Anchorage Island. However, after two seasons of experimental warming, the total abundance of Collembola decreased (p < 0.05) in the lichen community on Signy Island as a result of the population decline of the isotomid Cryptopygus antarcticus. In the same lichen community there was also a decline (p < 0.05) of the mesostigmatid predatory mite Gamasellus racovitzai, and a significant increase in the total number of Prostigmata.Overall, our data suggest that the consequences of an experimental temperature increase of 1–2 °C, comparable to the magnitude currently seen through recent climate change in the Antarctic Peninsula region, on soil arthropod communities in this region may not be similar for each location but is most likely to be small and initially slow to develop.     

Habitat associations of the endangered damselfly, Coenagrion mercuriale, in a water meadow ditch system in southern England

The damselfly Coenagrion mercuriale (Charpentier) (Odonata: Coenagrionidae) is threatened throughout Europe. It is listed on the EC Habitats and Species Directive and is the only odonate currently given priority status in the UK Biodiversity Action Plan. Information about the habitat preferences of this species is required to guide conservation and management programmes. We obtained estimates of density of mature adult C. mercuriale during an intensive mark-release-recapture study over 7.65 km of a water meadow ditch network in the Itchen Valley, Hampshire. Detailed habitat information was also collected, including a variety of physical variables, and data about the in-channel and bankside vegetation. C. mercuriale density and movement were analysed in relation to habitat variables and local population size using Generalized Linear Models. Mean adjacent population density was the single most important factor determining density. However the species was also associated with a number of habitat features, the most important of which were: a channel substrate consisting primarily of silt, wide underwater ledges (berms), in-channel emergent dicots, and bankside monocots. The presence of trees was negatively associated with damselfly density. Mean net lifetime movement was greatest from sections with low density, with smaller than average berms, and with deeper water. The causes and consequences of these findings are discussed in relation to the conservation and management of this rare species.     

Non nutritional factors affecting the growth of Trichoderma in culture

Species of Trichoderma typical of cool geographic regions possessed lower temperature optima and maxima than species from warm climatic regions. T. viride Pers. ex S.F. Gray and T. polysporum (Link ex Pers.) Rifai had temperature maxima ranging from 28–31°C and grew much better than other species at 7°C. The temperature maxima of T. koningii Oud. ranged from 32–35°C, T. hamatum (Bon.) Bain. from 30–35°C, T. harzianum Rifai from 30–38°C and T. pseudokoningii Rifai and T. saturnisporum Hammill from 40–41°C.Isolates of Trichoderma varied in their responses to CO₂-enriched atmospheres and the response was pH dependent. The largest responses were obtained on a medium of pH 7.5 as compared to an acid medium of pH 4.4. As the CO₂ level increased from 2 to 10 per cent, growth was reduced on an acid medium and increased on the alkaline medium as compared to cultures incubated in air. In air the optimum pH for Trichoderma ranged between 3–7 and 4.7. However, as the CO₂ concentration was increased to 10 per cent, growth was nearly as good at pH 7.5 as at pH 4.4.The addition of HCO₃^? to an alkaline medium strongly inhibited Trichoderma while having little effect on fungi isolated from roots or a strongly alkaline habitat. Low moisture content of litter was shown to have a variable effect on Trichoderma species and may be important in the ecology of Trichoderma. Salt (NaCl) concentration is not considered to be an important ecological factor.     

ABSTRACT of the Articles Printed in Journal of the Science of Soil and Manure,Japan

Changes in soil moisture determine the reproductive, respiratory, and metabolic activities of soil microorganisms and hence the rate of microbial nitrogen (N) mineralization. Soil moisture also affects the feeding activity and movement of soil invertebrates. Bacterial and fungal grazing by soil invertebrates such as Collembola and nematodes is known to increase N mineralization by increasing the reproductive, respiratory, and metabolic activities of microorganisms. Therefore, to assess the effect of soil moisture on N mineralization, faunal responses need to be considered. We used microcosms to investigate the effect of soil moisture on N mineralization mediated by a species of Collembola, Folsomia candida Willem. We used four moisture levels corresponding to matric potentials of ?42.5, ?11.8, ?0.8, and ?0.5 kPa and investigated the effects of these on Collembola with respect to feeding activity, growth, and contribution to N mineralization. The microbial biomass and ratio of bacterial to fungal biomass tended to increase with increasing soil moisture. Collembola feeding activity and growth increased with increasing soil moisture conditions. Collembola significantly enhanced N mineralization in soil at water potentials of ?11.8 and ?0.5?kPa. The greatest relative increase in N mineralization attributed to Collembola occurred in the ?11.8?kPa treatment. The change in contribution of the Collembola to N mineralization with soil moisture was most likely induced by changes in Collembola feeding activity and microbial community structure. The growth in body length of the Collembola was significantly greater at higher moisture conditions than at the lowest moisture condition, indicating that increases in both metabolic activity and biomass of the Collembola population contributed to the enhanced N mineralization.     

Landscape occupancy and local population size depends on host plant distribution in the butterfly Cupido minimus

We tested whether the landscape occupancy and local population size of the monophagous butterfly Cupido minimus can be predicted by patch size and isolation of its host plant or by other habitat characteristics. C. minimus and its larval food plant Anthyllis vulneraria are classified as rare and endangered in northern Germany. Adults of C. minimus are ranked as the most sedentary butterfly species in northern Europe.Around the city of Göttingen (Germany), we checked all known locations of A. vulneraria (n=70) in June 2002 for butterfly eggs (in blooming flowerheads) and adult butterflies (within 20-min transects).We found eggs of C. minimus or a high number of adults (>7) in all habitats with A. vulneraria (which are calcareous grasslands) even when isolated up to 2-4 km. In multiple regression analyses, local population size of adult butterflies was positively related to the cover of its larval food plant A. vulneraria explaining 65% of variance. Cover of A. vulneraria increased with increasing habitat area and increasing cover of plant species in flower and decreased with increasing cover of shrub layer. Habitat isolation and further factors describing habitat quality were not related to C. minimus population size or cover of its larval food plant.The results suggest that dispersal ability of C. minimus is greater than expected and that management should focus to increase A. vulneraria patches. For conservation, low impact grazing once a year and removing of excessive shrubs in winter seems to be the most appropriate strategies.     

Habitat specificity, seed germination and experimental translocation of the endangered herb Brachycome muelleri (Asteraceae)

Brachycome muelleri Sonder (Corunna daisy) is an endangered annual herb, endemic to the upper Eyre Peninsula of South Australia. It is restricted to a single population occupying an area of approximately 3 ha on steep, south-facing cliff-foot slopes of the Baxter Hills. Its unique habitat, within an otherwise generally arid region, optimises soil moisture retention through the provision of concentrated water catchment, shade, and low evaporation rates during the growing season. Weeds had the potential to significantly disrupt recruitment, growth and reproductive output, but grazing did not constitute a direct threat to the population. Fresh seeds were innately dormant, requiring a period of after-ripening before they would germinate. Dormancy was artificially broken by gibberellic acid (GA₃) treatment. Germination was optimal at 20 °C, and it was proposed that temperature plays an important role in regulating germination in situ. B. muelleri seeds did not respond to smoked water treatment, and GA₃ (1000 mg l⁻¹) was recommended as a routine seed treatment to stimulate germination. Trial translocations using seed as founder propagules resulted in low establishment, growth and flowering rates. Established seedlings provided several advantages over seed as founder propagules, including higher success rates, more vigorous growth, and improved seed yields in the first season. Successful regeneration, proliferation and expansion of a new translocated population was observed and recorded over four consecutive years. We suggest that conservation management of this species should include the establishment of several new populations by translocation to suitable, isolated, weed-free sites.     

Habitat modelling for the conservation of the rare ground beetle species Carabus variolosus (Coleoptera, Carabidae) in the riparian zones of headwaters

Carabus variolosus is a highly endangered insect which is listed in the EC Habitats and Species Directive. Detailed knowledge of the habitat requirements of this semi-aquatic woodland carabid beetle is needed if effective conservation and management strategies are to be developed. Previous habitat models have proved to be a successful analytical and predictive tool for the conservation of species. We conducted an intensive study over a two year period on two extant C. variolosus populations in Westphalia (Germany) using live capture pitfall traps. We analysed the distribution of the beetles over their main activity period in relation to a large number of edaphic and vegetation variables in order to estimate habitat suitability models and describe optimum ranges. C. variolosus is restricted to the fringes of water bodies and to areas of high soil moisture that display patches of bare soil, shows a slight preference for sparse tree vegetation, and avoids acidic soil. Temporal and spatial transferability of the statistically significant habitat models indicates their robustness and validity. Based on the results of our study, we suggest management measures for the conservation of C. variolosus, which promote the rehabilitation of natural flood plains of headwater areas.     

Interactive effects of pyrimethanil,soil moisture and temperature on Folsomia candida and Sinella curviseta (Collembola)

The aim of the presented investigation was to study effects resulting from specific aspects of climate change and chemical stress (individually or in interaction) on soil organisms. In detail, the interaction of different temperatures (20 °C and 26 °C) and soil moisture levels (30%, 50% and 70% of the water holding capacity) were examined in combination with the fungicide pyrimethanil on the reproduction of two Collembola species (Folsomia candida and Sinella curviseta). Testing was based on the standard collembolan reproduction test (OECD-Guideline 232), following an EC_X design. Low soil moisture led to a significant reduction of the juveniles in the control groups in contrast to medium or high soil moisture. Furthermore, the results showed a significant influence of both climatic factors on the toxicity of the fungicide. In general, both species reacted more sensitive when exposure was conducted in dry soil or at enhanced temperature.