Effect of green manure Sesbania sesban and nitrification inhibitor encapsulated calcium carbide (ECC) on soil mineral-N,enzyme activity and nitrifying organisms in a rice–wheat cropping system

Green manure Sesbania sesban (S. sesban) and the nitrification inhibitor encapsulated calcium carbide (ECC) have been used to improve N supply and management in rice–wheat production systems in India. However, the ecological impact of combined use of these materials is largely unknown. We conducted a net-house pot culture experiment for 2 years, to investigate the effects of S. sesban and ECC on mineral N availability (NH₄⁺ and NO₃^–), soil enzyme activities (dehydrogenase and nitrate reductase) and populations (MPN) of nitrifying organisms under a rice–wheat cropping system. Green manure S. sesban and ECC (+ECC or –ECC) were applied along with urea in various combinations to hybrid rice under flooded conditions. For wheat, it was urea alone or urea + ECC. Soil samples were studied at 10 days after top dressing, i.e. 40 days after rice transplanting and 35 days after wheat sowing, for above characteristics. The mineral-N in soil revealed the significant effect of combined use of S. sesban and ECC to enhance NH₄⁺ and total mineral-N (NH₄⁺ + NO₃^–) contents. Dehydrogenase and nitrate reductase activities and population (MPN) of ammonia oxidizing bacteria (AOB) revealed a significant reduction in soils, whereas nitrite oxidizing bacteria (NOB) remained almost unaffected (P > 0.05) in response to application of ECC with S. sesban and urea. Our results suggest that slow release of acetylene (C₂H₂) from ECC has reduced ammonia mono-oxygenase with reducing population of AOB, and has the potential to retard the enzyme activities in favor of C and N conservations in a semi-arid agro-ecosystem.     

C and N mineralization and microbial biomass in heavy-metal contaminated soil

Heavy metals such as arsenic (As), lead (Pb), copper (Cu) and zinc (Zn) can be found in large concentrations in mine spills in Mexico. Interest in contamination by these heavy metals has increased recently as they can change the functioning of soil ecosystems qualitatively and quantitatively. They disturb the activities of soil fauna and contaminate drinking water in large parts of the world, which severely affects human health. Little, however, is known how heavy metals might affect the biological functioning of a soil. Soil was sampled from eight locations along a gradient of heavy-metal contamination with distance from a mine in San Luis Potosí (Mexico) active since about 1800 AD. Microbial biomass was determined with the original chloroform fumigation incubation (CFI) as well as extraction (CFE) techniques and the substrate induced respiration (SIR) technique while C and N mineralization were measured. Total concentrations of As in the top 0–10 cm soil layer ranged from 8 to 22992 mg kg^–1, from 31 to 1845 mg kg^–1 for Pb, from 27 to 1620 mg kg^–1 for Cu and from 81 to 4218 mg kg^–1 for Zn. There was a significant negative correlation (P < 0.0001) between microbial biomass, soil organic carbon, total N and C mineralization and the heavy metal content of the soil. The microbial biomass C to organic C ratio, which varied from 0.4 to 1.9%, specific respiratory activity (qCO₂), and oxidation of NO₂^– were not affected by heavy metals. It was found that long-term contamination of soil with heavy metals had an adverse effect on the amount of soil microorganisms as evidenced by a marked decrease in microbial biomass C, but not some of their characteristics. According to principal components analysis (PCA), the correlation matrix showed three distinct factors explaining 71% of the variance. A first factor including heavy metals (As, Pb, Cu and Zn) with a negative loading and total N, organic C, soil microbial biomass with a positive loading characterized the soil organic matter and contamination status. Loam and sand combined for the second factor characterizing the textural classification while the third factor was loaded by CEC and clay content.     

Experimental nitrogen deposition alters the quantity and quality of soil dissolved organic carbon in an alpine meadow on the Qinghai-Tibetan Plateau

Dissolved organic matter (DOM) plays a central role in driving biogeochemical processes in soils, but little information is available on the relation of soil DOM dynamics to microbial activity. The effects of NO₃⁻ and NH₄⁺ deposition in grasslands on the amount and composition of soil DOM also remain largely unclear. In this study, a multi-form, low-dose N addition experiment was conducted in an alpine meadow on the Qinghai–Tibetan Plateau in 2007. Three N fertilizers, NH₄Cl, (NH₄)₂SO₄ and KNO₃, were applied at four rates: 0, 10, 20 and 40 kg N ha⁻¹ yr⁻¹. Soil samples from surface (0–10 cm) and subsurface layers (10–20 cm) were collected in 2011. Excitation/emission matrix fluorescence spectroscopy (EEM) was used to assess the composition and stability of soil DOM. Community-level physiological profile (CLPP, basing on the BIOLOG Ecoplate technique) was measured to evaluate the relationship between soil DOC dynamics and microbial utilization of C resources. Nitrogen (N) dose rather than N form significantly increased soil DOC contents in surface layer by 23.5%–35.1%, whereas it significantly decreased soil DOC contents in subsurface layer by 10.4%–23.8%. Continuous five-year N addition significantly increased the labile components and decreased recalcitrant components of soil DOM in surface layer, while an opposite pattern was observed in subsurface layer; however, the humification indices (HIX) of soil DOM was unaltered by various N treatments. Furthermore, N addition changed the amount and biodegradability of soil DOM through stimulating microbial metabolic activity and preferentially utilizing organic acids. These results suggest that microbial metabolic processes dominate the dynamics of soil DOC, and increasing atmospheric N deposition could be adverse to the accumulation of soil organic carbon pool in the alpine meadow on the Qinghai-Tibetan Plateau.     

Habitat use and activity patterns of larval and adult Cantharis beetles in arable land

Generalist predators play a key role in agriculturally and environmentally sustainable systems of pest control. A detailed knowledge on their ecology, however, is needed to improve management practices to maximize their service of pest control. The present study examines the habitat use and activity patterns of larval and adult Cantharis beetles that are abundant predators in arable land. Laboratory experiments revealed that sixth instar larvae of Cantharis fusca and Cantharis livida significantly preferred high relative humidity levels of 85–90% to lower ones. This can explain their preference for meadows over fields due to the more favorable microclimatic conditions in the former habitats. Surface activity of sixth instar Cantharis larvae during autumn, winter and early spring occurred at soil temperatures above 0 °C. However, no correlation between surface activity and soil temperature, air temperature or relative humidity was found above 0 °C. Catches of sixth instar Cantharis larvae within fenced pitfall traps were higher in a meadow (Mean ± S.D.; 13.8 ± 7.63 individuals m⁻²) than in a field (4.60 ± 2.89 individuals m⁻²). Mark-recapture density estimations for sixth instar larvae indicated mean densities of 25.9 ± 5.63 (field) and 42.8 ± 16.0 individuals m⁻² (meadow). The same pattern was found for adult emergence rates in the field (0.17 ± 0.39 adults m⁻²) and meadow (1.83 ± 1.17 adults m⁻²) as well as for adult densities in the vegetation (field 4.89 ± 3.62 adults 60 m⁻²; meadow 12.5 ± 11.2 adults 60 m⁻²). It is concluded that especially in winter elements that provide plant cover should be incorporated in arable fields to enhance larval cantharid population densities and to attract them from their prime grassland habitats into arable sites.     

Accounting for variability in soil microbial communities of temperate upland grassland ecosystems

This study aimed to determine the factors which regulate soil microbial community organisation and function in temperate upland grassland ecosystems. Soil microbial biomass (C_mic), activity (respiration and potential carbon utilisation) and community structure (phospholipid fatty acid (PLFA) analysis, culturing and community level physiological profiles (CLPP) (Biolog^®)) were measured across a gradient of three upland grassland types; Festuca–Agrostis–Galium grassland (unimproved grassland, National Vegetation Classification (NVC) — U4a); Festuca–Agrostis–Galium grassland, Holcus–Trifolium sub-community (semi-improved grassland, NVC — U4b); Lolium–Cynosurus grassland (improved grassland, NVC — MG6) at three sites in different biogeographic areas of the UK over a period of 1 year. Variation in C_mic was mainly due to grassland type and site (accounting for 55% variance, v, in the data). C_mic was significantly (P<0.001) high in the unimproved grassland at Torridon (237.4 g C m⁻² cf. 81.2 g C m⁻² in semi- and 63.8 g C m⁻² in improved grasslands) and Sourhope (114.6 g C m⁻² cf. in 44.8 g C m⁻² semi- and 68.3 g C m⁻² in improved grasslands) and semi-improved grassland at Abergwyngregyn (76.0 g C m⁻² cf. 41.7 g C m⁻² in un- and 58.3 g C m⁻² in improved grasslands). C_mic showed little temporal variation (v=3.7%). Soil microbial activity, measured as basal respiration was also mainly affected by grassland type and site (n=32%). In contrast to C_mic, respiration was significantly (P<0.001) high in the improved grassland at Sourhope (263.4 l h⁻¹m⁻² cf. 79.6 l h⁻¹m⁻² in semi- and 203.9 l h⁻¹m⁻² unimproved grasslands) and Abergwyngregyn (198.8 l h⁻¹m⁻² cf. 173.7 l h⁻¹m⁻² in semi- and 88.2 l h⁻¹m⁻² unimproved grasslands). Microbial activity, measured as potential carbon utilisation, agreed with the respiration measurements and was significantly (P<0.001) high in the improved grassland at all three sites (A₅₉₀ 0.14 cf. 0.09 in semi- and 0.07 in unimproved grassland). However, date of sampling also had a significant (P<0.001) impact on C utilisation potential (v=24.7%) with samples from April 1997 having highest activity at all three sites. Variation in microbial community structure was due, predominantly, to grassland type (average v=23.6% for bacterial and fungal numbers and PLFA) and date of sampling (average v=39.7% for bacterial and fungal numbers and PLFA). Numbers of culturable bacteria and bacterial PLFA were significantly (P<0.001) high in the improved grassland at all three sites. Fungal populations were significantly (P<0.01) high in the unimproved grassland at Sourhope and Abergwyngregyn. The results demonstrate a shift in soil microbial community structure from one favouring fungi to one favouring bacteria as grassland improvement increased. Numbers of bacteria and fungi were also significantly (P<0.001) higher in August than any other sampling date. Canonical variate analysis (CVA) of the carbon utilisation data significantly (P<0.05) differentiated microbial communities from the three grassland types, mainly due to greater utilisation of sugars and citric acid in the improved grasslands compared to greater utilisation of carboxylic acids, phenolics and neutral amino acids in the unimproved grasslands, possibly reflecting substrate availability in these grasslands. Differences in C_mic, activity and community structure between grassland types were robust over time. In addition, broad scale measures of microbial growth and activity (C_mic and respiration) showed little temporal variation compared to measures of soil microbial community structure, which varied quantitatively with respect to environmental variables (temperature, moisture) and plant productivity, hence substrate supply.     

Climatic influences on active fractions of soil organic matter

Biologically active fractions of soil organic matter are important in understanding decomposition potential of organic materials, nutrient cycling dynamics, and biophysical manipulation of soil structure. We evaluated the quantitative relationships among potential C and net N mineralization, soil microbial biomass C (SMBC), and soil organic C (SOC) under four contrasting climatic conditions. Mean SOC values were 28±11 mg g⁻¹ (n=24) in a frigid–dry region (Alberta/British Columbia), 25±5 mg g⁻¹ (n=12) in a frigid–wet region (Maine), 11±4 mg g⁻¹ (n=117) in a thermic–dry region (Texas), and 12±5 mg g⁻¹ (n=131) in a thermic–wet region (Georgia). Higher mean annual temperature resulted in consistently greater basal soil respiration (1.7 vs 0.8 mg CO₂–C g⁻¹ SOC d⁻¹ in the thermic compared with the frigid regions, P<0.001), greater net N mineralization (2.8 vs 1.3 mg inorganic N g⁻¹ SOC 24 d⁻¹, P<0.001), and greater SMBC (53 vs 21 mg SMBC g⁻¹ SOC, P<0.001). Specific respiratory activity of SMBC was, however, consistently lower in the thermic than in the frigid regions (29 vs 34 mg CO₂–C g⁻¹ SMBC d⁻¹, P<0.01). Higher mean annual precipitation resulted in consistently lower basal soil respiration (1.1 vs 1.3 mg CO₂–C g⁻¹ SOC d⁻¹ in the wet compared with the dry regions, P<0.01) and lower SMBC (31 vs 43 mg SMBC g⁻¹ SOC, P<0.001), but had inconsistent effects on net N mineralization that depended upon temperature regime. Specific respiratory activity of SMBC was consistently greater in the wet than the dry regions (≈33 vs 29 mg CO₂–C g⁻¹ SMBC d⁻¹, P<0.01). Although the thermic regions were not able to retain as high a level of SOC as the frigid regions, due likely to high annual decomposition rates, biologically active soil fractions were as high per mass of soil and even 2–3-times greater per unit of SOC in the thermic compared with the frigid regions. These results suggest that macroclimate has a large impact on the portion of soil organic matter that is potentially active, but a relatively small impact on the specific respiratory activity of SMBC.     

Long-term management impacts on soil C,N and physical fertility: Part II: Bad Lauchstadt static and extreme FYM experiments

Manure is a source of plant nutrients and can make a valuable contribution to soil organic matter (SOM). Two experimental sites were studied on a Halpic Phaeozem soil near Bad Lauchstadt in Germany. The first experiment, called the static experiment, commenced in 1902. The impact of fresh farmyard manure (FYM) (0, 20 and 30 t ha⁻¹ 2 year⁻¹) combined with P, K and N fertiliser application on total organic C (C_T), labile C (C_L), non-labile C (C_NL), total N (N_T), mean weight diameter (MWD) and unsaturated hydraulic conductivity (K_unsat) was investigated. The second experiment commenced in 1984 and investigated the effect of extreme rates of fresh FYM applications (0, 50, 100 and 200 t ha⁻¹ year⁻¹) and cropping, or a continuous tilled fallow on the same soil properties. At both sites a nearby grassland site served as a reference. On the static experiment, FYM application increased all C fractions, particularly C_L, where application of 30 t ha⁻¹ 2 year⁻¹ increased C_L by 70% compared with no FYM application. Fertiliser additions to the static experiment had a positive influence on C fractions while N_T increased from both FYM and fertiliser application. MWD increased as a result of FYM application, but did not reach that of the grassland site. Both fertiliser and FYM application increased K_unsat (10 mm tension) on the static experiment. In the second experiment application of 200 t ha⁻¹ year⁻¹ of FYM increased concentrations of C_L by 173% and of C_NL by 80%, compared with no FYM application to make them equivalent to, or greater than the grassland site. A continuously tilled fallow resulted in significant decreases in all C fractions, N_T and MWD compared with the cropped site, while K_unsat (10 mm tension) was increased on the 0 and 50 t ha⁻¹ year⁻¹ treatments as a result of a recent tillage. There was no difference in K_unsat between the cropped and the continuous tilled fallow at FYM applications of 100 and 200 t ha⁻¹ year⁻¹. There were similar significant positive correlations of all C fractions and N_T with MWD on both experimental sites but the relationships were much stronger on the extreme FYM experiment. Weaker relationships of C fractions and N_T with K_unsat (10 mm tension) occurred for the static experimental site but these were not significant for the extreme FYM experimental site. The strongest relationship between C fractions and K_unsat was with C_L. This research has shown that applications of FYM can increase SOM and improve soil physical fertility. However, the potential risk of very high rates of FYM on the environment need to be taken into consideration, especially since the application of organic materials to soils is likely to increase in the future.     

Animal manure and anhydrous ammonia amendment alter microbial carbon use efficiency,microbial biomass,and activities of dehydrogenase and amidohydrolases in semiarid agroecosystems

The potential negative impact of agricultural practices on soil and water quality is of environmental concern. The associated nutrient transformations and movements that lead to environmental concerns are inseparable from microbial and biochemical activities. Therefore, biochemical and microbiological parameters directing nitrogen (N) transformations in soils amended with different animal manures or inorganic N fertilizers were investigated. Soils under continuous corn cultivation were treated with N annually for 5 years at 56, 168, and 504 kg N ha⁻¹ in the form of swine effluent, beef manure, or anhydrous ammonia. Animal manure treatments increased dehydrogenase activity, microbial biomass carbon (C_mic) and N (N_mic) contents, and activities of amidohydrolases, including l-asparaginase, urease, l-glutaminase, amidase, and β-glucosaminidase. Soils receiving anhydrous ammonia demonstrated increased nitrate contents, but reduced microbiological and biochemical activities. All treatments decreased C_mic:organic C (C_org) ratios compared with the control, indicating reduced microbial C use efficiency and disturbance of C equilibrium in these soil environments. Activities of all enzymes tested were significantly correlated with soil C_org contents (P < 0.001, n = 108), but little correlation (r = 0.03, n = 36) was detected between C_mic and C_org. Activities of amidase and β-glucosaminidase were dominated by accumulated enzymes that were free of microbial cells, while activities of asparaginase and glutaminase were originated predominately from intracellular enzymes. Results indicated that soil microbial and biochemical activities are sensitive indicators of processes involved in N flow and C use efficiency in semiarid agroecosystems.     

Nitrogen mineralization in the ruderal sub-alpine communities in Mount Uludağ, Turkey

Nitrogen mineralization and nitrification in the soil of sub-alpine ruderal community of Mount Uludağ, Bursa, Turkey was measured for 1 year, under field conditions with Verbascum olympicum and Rumex olympicus being the dominant pioneer species under dry and wet sites, respectively. Seasonal fluctuations were observed in N mineralization and nitrification. The net N mineralization and nitrification were high in early summer and winter, due to high moisture. The annual net N mineralization rate (for the 0–15 cm soil layer) was higher under R. olympicus (188 kg N ha⁻¹ yr⁻¹) than under V. olympicum (96 kg N ha⁻¹ yr⁻¹). A significant positive correlation between net N mineralization and soil organic C (r² = 0.166), total N (r² = 0.141) and water content (r² = 0.211) was found. Our results indicate that N mineralization rate is high in soils of ruderal communities on disturbed sites and varies with dominant species and, a difference in net N mineralization rate can be attributed to organic C, total N and moisture content of soils.     

Phosphorus enrichment helps increase soil carbon mineralization in vegetation along an urban-to-rural gradient,Nanchang, China

We used four vegetation types located along an urban–suburban–rural gradient in Nanchang, China to study how the deposition of nitrogen (N) and phosphorus (P) in the urban area affected soil carbon (C) cycling. We found that total P, nitrate (NO₃⁻–N), available P, and the abundances of culturable bacteria, actinobacteria, and nitrifying bacteria in soils, collected to 15 cm depth in August of 2008, decreased along the urban-to-rural gradient (P < 0.05); the C/P and N/P ratios, ammonium (NH₄⁺–N), and culturable fungi abundance showed the reverse trends; whereas soil organic C, total N, C/N, mineral N, and the activities of sucrase and neutraland acid phosphatase showed no pattern with gradient and vegetation type. Compared to suburban and rural sites, total and available P in soil increased 168% and 131%, 47% and 139%, respectively in urban sites. The cumulative amount of CO₂ emission per gram of soil (C_min, incubated from 2 to 43 days) varied little along the urban-to-rural gradient, but showed positive correlations with organic C, total N, total P, nitrate, mineral N concentrations, C/N, bacteria and actinobacteria abundances, sucrase and acid phosphatase activities. In contrast, the cumulative amount of CO₂ produced per gram organic C (C_min/OC) within the incubation period was influenced by gradient, vegetation type, and their interaction, and values were about 35% greater in the urban than in suburban and rural sites. The relationship between elevated C_min/OC in urban vegetations and the enrichment of P in organic matter (P/C ratio) suggests that P coming from urban household waste can degrade the stability of organic C in urban soils.     

Temperature and substrate effects on C & N mineralization and microbial community function of soils from a hybrid poplar chronosequence

Substrate input as well as climatic factors affect C and N cycling and microbial properties in forest soils. We used a microcosm approach to investigate the response of CO₂ efflux, net N mineralization, and microbial community-level physiological profile (CLPP) to temperature (5 vs. 15 °C) and substrate (with and without sucrose addition) addition in surface mineral soils collected from 4-, 6-, 13-, and 15-year old (ages in 2007) hybrid poplar (Populus deltoides × Populus × petrowskyana var. Walker) stands in northern Alberta. In the early stage of incubation (0–2 h), CO₂ efflux was higher at 5 °C than at 15 °C with little effect from substrate addition, while 24 h after the addition of substrate, CO₂ efflux became higher under the 15 °C incubation. After 72 h incubation, temperature and substrate addition effects on CO₂ efflux subsided and CO₂ efflux rates tended to converge among the treatments. Net N mineralization was significantly affected by substrate addition and stand age, while rates of net ammonification were higher at 5 °C than at 15 °C. Net N mineralization occurred without sucrose addition while net immobilization occurred with sucrose addition. The soil from the youngest stand had the lowest N mineralization rate among the stands for each corresponding substrate-incubation temperature treatment. We used Ecoplates from Biolog™ to study sole-carbon-source-utilization profiles of microbial communities at the end of the incubation. Principal component analysis of C utilization data separated microbial communities with respect to substrate addition, incubation temperature and stand age. Our data showed that organic matter mineralization and microbial substrate utilization were affected by incubation temperature, substrate availability and stand age, indicating that the responses of microbial communities in the studied hybrid poplar plantations to temperature changes were strongly mediated by labile C availability and stand development.     

Relationships between soil pH and microbial properties in a UK arable soil

Effects of changing pH along a natural continuous gradient of a UK silty-loam soil were investigated. The site was a 200 m soil transect of the Hoosfield acid strip (Rothamsted Research, UK) which has grown continuous barley for more than 100 years. This experiment provides a remarkably uniform soil pH gradient, ranging from about pH 8.3 to 3.7. Soil total and organic C and the ratio: (soil organic C)/(soil total N) decreased due to decreasing plant C inputs as the soil pH declined. As expected, the CaCO₃ concentration was greatest at very high pH values (pH > 7.5). In contrast, extractable Al concentrations increased linearly (R² = 0.94, p < 0.001) from below about pH 5.4, while extractable Mn concentrations were largest at pH 4.4 and decreased at lower pHs. Biomass C and biomass ninhydrin-N were greatest above pH 7. There were statistically significant relationships between soil pH and biomass C (R² = 0.80, p < 0.001), biomass ninhydrin-N (R² = 0.90, p < 0.001), organic C (R² = 0.83, p < 0.001) and total N (R² = 0.83, p < 0.001), confirming the importance of soil organic matter and pH in stimulating microbial biomass growth. Soil CO₂ evolution increased as pH increased (R² = 0.97, p < 0.001). In contrast, the respiratory quotient (qCO₂) had the greatest values at either end of the pH range. This is almost certainly a response to stress caused by the low p. At the highest pH, both abiotic (from CaCO₃) and biotic Co₂ will be involved so the effects of high pH on biomass activity are confounded. Microbial biomass and microbial activity tended to stabilise at pH values between about 5 and 7 because the differences in organic C, total N and Al concentrations within this pH range were small. This work has established clear relationships between microbial biomass and microbial activity over an extremely wide soil pH range and within a single soil type. In contrast, most other studies have used soils of both different pH and soil type to make similar comparisons. In the latter case, the effects of soil pH on microbial properties are confounded with effects of different soil types, vegetation cover and local climatic conditions.     

Microbial properties and soil respiration in submontane forests of Venezuelian Guyana: characteristics and response to fertilizer treatments

The distribution of vegetation types in Venezuelan Guyana (in the ‘Canaima’ National Park) represents a transitional stage in a long term process of savannization, a process considered to be conditioned by a combined chemical and intermittent drought stress. All types of woody vegetation in this environment accumulate large amounts of litter and soil organic carbon (SOC). We hypothesized that this accumulation is caused by low microbial activity. During 1 year we measured microbial biomass carbon (Cmic), microbial respiration and soil respiration of stony Oxisols (Acrohumox) at a tall, a medium and a low forest and with three chemical modifications of site conditions by the addition of NO₃⁻, Ca²⁺ and PO₄³⁻ as possible limiting elements. Due to high SOC contents, mean Cmic was 1 mg g soil⁻¹ in the mineral topsoil and 3 mg g soil⁻¹ in the forest floor. Mean microbial respiration in the mineral topsoil and the forest floor were 165 and 192 μg CO₂-C g soil⁻¹ d⁻¹, respectively. We calculated high mean metabolic quotients (qCO₂) of 200 mg CO₂-C g Cmic⁻¹ d⁻¹ in the litter layer and 166 mg CO₂-C g Cmic⁻¹ d⁻¹ in the mineral topsoil, while the Cmic-to-SOC ratios were as low as 1.0% in the litter layer and 0.8% in the mineral topsoil. Annual soil respiration was 9, 12 and 10 Mg CO₂-C ha⁻¹ yr⁻¹ in the tall, medium and low forest, respectively. CO₂ production was significantly increased by CaHPO₄ fertilization, but no consistent effects were caused by Ca²⁺ and NO₃⁻, fertilization. Our findings indicate that Cmic and microbial respiration are reduced by low nutrient concentrations and low litter and SOC quality. Reduced microbial decomposition may have contributed to SOC accumulation in these forests.     

Rapid estimation of microbial biomass in grassland soils by ultra-violet absorbance

A reliable and simple technique for estimating soil microbial biomass (SMB) is essential if the role of microbes in many soil processes is to be quantified. Conventional techniques are notoriously time-consuming and unreproducible. A technique was investigated that uses the UV absorbance at 280 nm of 0.5 M K₂SO₄ extracts of fumigated and unfumigated soils to estimate the concentrations of carbon, nitrogen and phosphorus in the SMB. The procedure is based on the fact that compounds released after chloroform fumigation from lysed microbial cells absorb in the near UV region. Using 29 UK permanent grassland soils, with a wide range of organic matter (2.9–8.0%) and clay contents (22–68%), it was demonstrated that the increase in UV absorbance at 280 nm after soil fumigation was strongly correlated with the SMB C (r=0.92), SMB N (r=0.90) and SMB P (r=0.89), as determined by conventional methods. The soils contained a wide range of SMB C (412–3412 μg g⁻¹ dry soil), N (57–346 μg g⁻¹ dry soil) and P (31–239 μg g⁻¹ dry soil) concentrations. It was thus confirmed that the UV absorbance technique described was a rapid, simple, precise and relatively inexpensive method of estimating soil microbial biomass.     

Soil microbial community responses to dairy manure or ammonium nitrate applications

Soil management practices that result in increased soil C also impact soil microbial biomass and community structure. In this study, the effects of dairy manure applications and inorganic N fertilizer on microbial biomass and microbial community composition were determined. Treatments examined were a control with no nutrient additions (CT), ammonium nitrate at 218 kg N ha⁻¹ (AN), and manure N rates of 252 kg manure-N ha⁻¹ (LM) and 504 kg manure-N ha⁻¹ (HM). All plots were no-till cropped to silage corn (Zea mays, L. Merr) followed by a Crimson clover (Trifolium incarnatum, L.)/annual ryegrass (Lolium multiflorum, Lam.) winter cover crop. Treatments were applied yearly, with two-thirds of the N applied in late April or early May, and the remainder applied in September. Soil samples (0–5, 5–10, and 10–15 cm) were taken in March 1996, prior to the spring nutrient application. Polar lipid fatty acid (PLFA) analysis was used to assess changes in microbial biomass and community structure. Significantly greater soil C, N and microbial biomass in the 0–5 cm depth were observed under both manure treatments than in the CT and AN treatments. There was also a definable shift in the microbial community composition of the surface soils (0–5cm). Typical Gram-negative bacteria PLFA biomarkers were 15 and 27% higher in the LM and HM treatments than in the control. The AN treatment resulted in a 15% decrease in these PLFA compared with the control. Factor analysis of the polar lipid fatty acid profiles from all treatments revealed that the two manure amendments were correlated and could be described by a single factor comprised of typical Gram-negative bacterial biomarkers. The AN treatments from all three depths were also correlated and were described by a second factor comprised of typical Gram-positive bacterial biomarkers. These results demonstrate that soil management practices, such as manuring, that result in accumulations of organic carbon will result in increased microbial biomass and changes in community structure.     

Multiple measurements constrain estimates of net carbon exchange by a Eucalyptus forest

Net ecosystem exchange of carbon (F_NEE) was estimated for a temperate broadleaf, evergreen eucalypt forest ecosystem at Tumbarumba in south-eastern Australia to investigate the processes controlling forest carbon sinks and their response to climate. Measurements at a range of temporal and spatial scales were used to make three different estimates of F_NEE based on: (1) the difference between fluxes of carbon input by photosynthesis and output by autotrophic plus heterotrophic respiration, (2) changes over time in the carbon pools in the above- and below-ground biomass, soil and litter, and (3) micrometeorological flux measurements that provide a continuous estimate of the net exchange. A rigorous comparison of aggregated component fluxes and the net eddy fluxes within a flux tower source area was achieved based on an inventory of the site and a detailed sampling strategy. Measurements replicated in space and time provided mean values, confidence limits and patterns of variation of carbon pools and fluxes that allowed comparisons within known limits of uncertainty. As a result of comparisons between nighttime eddy flux and chamber measurements of respiration, a revised micrometeorological method was developed for estimating nighttime carbon flux using flux tower measurements. Uncertainty in the final estimate of F_NEE was reduced through mutual constraints of each of these measurement approaches. F_NEE for the period October 2001–September 2002, with average rainfall, was an uptake of 6.7 (5.1–8.3) tC ha^?1 yr^?1 estimated from component fluxes, and 5.4 (3.0–7.5) tC ha^?1 yr^?1 estimated from the revised eddy flux method. Biomass increment was 4.5 (3.7–5.4) tC ha^?1 yr^?1 and the remaining 0.9–2.2 tC ha^?1 yr^?1 could represent a carbon sink in the soil and litter pools or lie within the confidence limits of the measured fluxes. F_NEE was reduced to ?0.1 to 2.4 tC ha^?1 yr^?1 during a period of drought and insect disturbance in October 2002–September 2003, with biomass increment being the main component reduced. The forest is a large carbon sink compared with other forest ecosystems, but this is subject to high-annual variability in response to climate variability and disturbance.     

Effect of wetting intensity on soil GHG fluxes and microbial biomass under a temperate forest floor during dry season

The increasing frequency of periodic droughts followed by heavy rainfalls is expected for this current century, but little is known about the effects of wetting intensity on the in situ biogenic greenhouse gas (GHG) fluxes of forest soils and soil microbial biomass. To gain new insights into the underlying mechanisms responsible for wetting-induced GHG fluxes in situ, rain simulation field experiments during a natural prolonged drought period were done under a temperate forest in northeast China. The intensity of rainfall-induced CO₂ pulses increased from 0.84 to 2.08 g CO₂–C m^? 2 d^? 1 with the intensity of wetting up to ca. 80% water-filled pore space, which coincided with an increase in soil microbial biomass and with a decrease in soil labile organic C following wetting. Methane uptake rates decreased from 1.76 to 0.87 mg CH₄–C m^? 2 d^? 1 with the intensity of wetting. Wetting dry forest floor increased N₂O fluxes from 6.2 to 25.9 μg N₂O–N m^? 2 d^? 1, but there was no significant difference between all experimental wetted plots. The rainfall-induced N₂O pulses with increasing wetting intensity were opposite to that of the CO₂ pulses, showing a maximum response at the lowest wetting intensity. An analysis of the temperature sensitivity of GHG fluxes indicated that temperature had an increased effect on the in situ CO₂ flux and CH₄ uptake, respectively, under wetted and dry conditions. The global warming potential of GHG fluxes and Q₁₀ value of the temperature response of CO₂ fluxes increased linearly with wetting intensity. The results indicate that the rainfall-induced soil CO₂ pulse is mainly due to enhanced microbial consumption on substrates and highlight the complex nature of belowground C-cycling responses to climate change in northeast China forests that normally experience periodic droughts followed by heavy rainfalls over the year.     

Microbial biomass in a semi arid soil of the central highlands of Mexico cultivated with maize or under natural vegetation

Microbial biomass (MB) is the key factor in nutrient dynamics in soil, but no information exists how clearing of vegetation to cultivate maize in the central highlands of Mexico might affect it. Soil MB was measured with the chloroform fumigation incubation (CFI) and fumigation extraction (CFE) techniques and the substrate-induced respiration (SIR) method in soil sampled under or outside the canopy of mesquite (Prosopis laevigata) and huisache (Acacia tortuoso), N₂ fixing shrubs, and from fields cultivated with maize. Microbial biomass C as measured with the CFI technique ranged from 122 mg C kg⁻¹ in agricultural soil to 373 mg C kg⁻¹ in soil sampled under mesquite shrubs. Microbial biomass N as measured with the CFI technique ranged from 11 mg N kg⁻¹ in agricultural soil to 116 mg N kg⁻¹ in soil sampled under mesquite shrub. The ratio of microbial biomass C as measured with CFI related to the ninhydrin-positive compounds (NPC) was 12.23 after 1 day and 8.43 after 10 days while the relationship with extractable C was 3.15 and 2.96, respectively. The metabolic quotient (qCO₂) decreased in the order OUTSIDE > MESQUITE > HUIZACHE > AGRICULTURE, and the microbial biomass:soil organic C ratio decreased in the order MESQUITE > HUIZACHE > OUTSIDE > AGRICULTURE using SIR to determine the microbial biomass. It was found that converting soil under natural vegetation to arable soil was not only detrimental for soil quality, but might be unsustainable as organic matter input is limited.     

Earthworms,soil mineral nitrogen and forage production in grass-based hayfields

This study was designed to address how earthworm activity influences soil mineral nitrogen (N), plant N uptake and forage yield in grass-based hayfields. Earthworm populations were reduced by applying carbaryl pesticide to the experimental field plots every 2-weeks, effectively eliminating the earthworms for up to 12-weeks from May to August. Grass yields and tissue N concentrations were measured every 2 weeks, and the soil mineral N concentration determined at the final harvest. Reducing earthworm populations for up to 12-weeks did not affect grass yield or N uptake. However, regression analysis showed that plots with undisturbed earthworm populations had higher soil N by 0.8 kg N ha^?1 per week, representing mineralization of about 10 kg N ha^?1 during the 12-week study. This was a fraction of the fertilizer N recommendation (75 kg N ha^?1) for grass-based hayfields in this region. Therefore, the increase in soil mineral N from earthworm activity was small, relative to the N requirements of the hayfield.     

Microbial utilization and mineralization of [14C]glucose added in six orders of concentration to soil

The substrate availability for microbial biomass (MB) in soil is crucial for microbial biomass activity. Due to the fast microbial decomposition and the permanent production of easily available substrates in the rooted top soil mainly by plants during photosynthesis, easily available substrates make a very important contribution to many soil processes including soil organic matter turnover, microbial growth and maintenance, aggregate stabilization, CO₂ efflux, etc. Naturally occurring concentrations of easily available substances are low, ranging from 0.1 μM in soils free of roots and plant residues to 80 mM in root cells. We investigated the effect of adding ¹⁴C-labelled glucose at concentrations spanning the 6 orders of magnitude naturally occurring concentrations on glucose uptake and mineralization by microbial biomass. A positive correlation between the amount of added glucose and its portion mineralized to CO₂ was observed: After 22 days, from 26% to 44% of the added 0.0009 to 257 μg glucose C g^?1 soil was mineralized. The dependence of glucose mineralization on its amount can be described with two functions. Up to 2.6 μg glucose C g^?1 soil (corresponds to 0.78% of initial microbial biomass C), glucose mineralization increased with the slope of 1.8% more mineralized glucose C per 1 μg C added, accompanied by an increasing incorporation of glucose C into MB. An increased spatial contact between micro-organisms and glucose molecules with increasing concentration may be responsible for this fast increase in mineralization rates (at glucose additions <2.6 μg C g^?1). At glucose additions higher than 2.6 μg C g^?1 soil, however, the increase of the glucose mineralization per 1 μg added glucose was much smaller as at additions below 2.6 μg C g^?1 soil and was accompanied by decreasing portions of glucose ¹⁴C incorporated into microbial biomass. This supports the hypothesis of decreasing efficiency of glucose utilization by MB in response to increased substrate availability in the range 2.6–257 μg C g^?1 (=0.78–78% of microbial biomass C). At low glucose amounts, it was mainly stored in a chloroform-labile microbial pool, but not readily mineralized to CO₂. The addition of 257 μg glucose C g^?1 soil (0.78 μg C glucose μg^?1 C micro-organisms) caused a lag phase in mineralization of 19 h, indicating that glucose mineralization was not limited by the substrate availability but by the amount of MB which is typical for 2nd order kinetics.