Legacy Arsenic Pollution of Lakes Near Cobalt,Ontario, Canada: Arsenic in Lake Water and Sediment Remains Elevated Nearly a Century After Mining Activity Has Ceased

Century old mine tailings in the Cobalt and Silver Center areas are widely dispersed throughout the terrestrial and aquatic environments and contain high concentrations of arsenic. Arsenic concentrations were found to be as high as 972 μg/L in surface waters and 10,800 mg/kg in lake sediment. The mean values for arsenic in surface waters and sediment from 9 lakes directly influenced by mining activity were 431 μg/L and 1704 mg/kg, respectively, whereas in the 12 control lakes with no mining activity in their catchment had mean values of 2.2 μg/L and 11 mg/kg in their water and sediment, respectively. Lakes impacted by downstream tailing migration (n?=?4) were also assessed and had intermediate concentrations of arsenic. Principal component analysis identified contaminated lakes as having different geochemical signatures than control lakes but lake sediment that was sampled below tailings in contaminated lakes, deposited pre-mining, can resemble the geochemistry of those found in control lakes. Arsenic concentrations in these samples ranged from 4.4 to 185 mg/kg, which can be considered reasonable background as these areas contained abundant mineral deposits that could naturally elevate background concentrations. Even though background concentrations are naturally elevated, the presence of arsenic-rich tailings in these lakes has prevented any natural recovery from occurring. Fe-Mn oxides at the water-sediment interface perpetually scavenge arsenic from buried tailings below and from contaminated surface waters that cause arsenic concentrations to remain enriched in the upper sediments even after tailings have been buried by lake sediment. This process has prevented recovery of the lake ecosystems even after nearly a century without mining.     

水淹条件下水稻土中砷的生物化学行为研究进展

水稻土中砷的氧化还原和甲基化等生物化学过程是影响水稻砷毒性的主要作用机制;同时,水淹厌氧条件是驱动水稻土中砷的生物化学过程关键环节,且是导致水稻对砷大量吸收累积的主要原因,对以水稻为主食的人们造成健康威胁。本文综述了水稻土中砷的氧化还原和甲基化现象、砷的生物化学作用机制以及影响水稻土砷迁移转化的关键因素,并探讨了水淹厌氧条件对水稻土砷代谢微生物群落、微生物基因表达水平以及对砷归趋的影响。最后,展望了未来的研究方向,以期识别不同水管理模式下土壤微环境对水稻土中砷代谢微生物群落结构与基因表达水平的影响机制,为深入理解砷的生物化学行为和降低水稻对砷的吸收累积提供科学的理论参考。     

Diversity of diazotroph populations in the rhizosphere of maize (Zea mays L.) growing on different French soils

Summary We studied the dominant diazotrophs associated with maize roots and rhizosphere soil originating from three different locations in France. An aseptically grown maize plantlet, the spermosphere model, was used to isolate N₂-fixing (acetylene-reducing) bacteria. Bacillus circulans was the dominant N₂-fixing bacterium in the rhizosphere of maize-growing soils from Ramonville and Trogny, but was not found in maize-growing sandy soil from Pissos. In the latter soil, Enterobacter cloacae, Klebsiella terrigena, and Pseudomonas sp. were the most abundant diazotrophs. Azospirillum sp., which has been frequently reported as an important diazotroph accociated with the maize rhizosphere, was not isolated from any of these soils. The strains were compared for their acetylene-reducing activity in the spermosphere model. The Bacillus circulans strains, which were more frequently isolated, also exhibited significantly greater acetylene-reducing activity (3100 nmol ethylene day^-1 plant^-1) than the Enterobacteriaceae strains (180 nmol ethylene day^-1 plant^-1). This work indicates for the first time that Bacillus circulans is an important maizerhizosphere-associated bacterium and a potential plant growth-promoting rhizobacterium.     

Accumulation and Transformation of Arsenic in the Blue-Green Alga <Emphasis Type="Italic">Synechocysis</Emphasis> sp. PCC6803

Synechocysis sp. PCC6803 is a unicellular blue alga which ubiquitously exists in aquatic system and is considered to play a role in arsenic cycling. Our results showed that Synechocysis can accumulate arsenic as much as 1.0 and 0.9 g kg⁻¹ DW when exposed to 0.5 mM arsenate and arsenite for 14 days, respectively. In addition, arsenic species in cells were assayed under different exposure conditions and it was found that inorganic arsenic, including arsenate and arsenite, is the dominant species. Organic methylated arsenicals can only be detected exposed to higher arsenic concentration range (100–500 μM). Arsenate is the dominant arsenic species and presents more than 80% of the total arsenic in cells. Efflux of both arsenate and arsenite was observed. When treated with 2.67 μM arsenite, Synechocysis can rapidly oxidize arsenite to arsenate and accumulate As rapidly. The observed arsenic oxidation in solute is solely caused by cellular oxidation. Given the robust ability of As accumulation, it can serve as a phytoremediation organism to efficiently remove arsenic from aquatic environments.     

Interaction of Bradyrhizobium sp. with an antagonistic actinomycete in culture medium and in soil

Summary Experiments were conducted to determine the extent to which populations of Bradyrhizobium sp. strain Tal 209SR were suppressed by the antagonistic activity of a Streptomyces sp. isolated from a highly weathered tropical soil. The activity of the actinomycete was evaluated in culture medium in the presence or absence of clay minerals and in the soil from which the actinomycete was isolated after sterilization by gamma-irradiation. The presence of the actinomycete in culture medium was associated with a significant reduction in the density of Bradyrhizobium sp. (Tal 209SR). Nevertheless, the density of the Bradyrhizobium sp. surviving in the medium in the presence of the actinomycete was much higher than that normally observed when comparable densities of rhizobia are introduced into non-sterile soils. The presence of the antagonistic actinomycete in culture medium was associated with a drastic decrease in the optical density of the medium. This decrease was accompanied by a significant decrease in the insoluble exopolysaccharide content of the medium in addition to the significant decrease in bradyrhizobial cells. The actinomycete did not appear to significantly influence the growth and survival of the test Bradyrhizobium sp. in sterile soil. The inability of the actinomycete to significantly antagonize the test bacterium in sterile soil was not adequately explained by the presence of clay minerals.Hawaii Institute of Tropical Agriculture and Human Resources Journal Series No. 3129     

Arsenic from Groundwater to Paddy Fields in Bangladesh: Solid–Liquid Partition, Sorption and Mobility

The arsenic contamination of Bangladesh groundwater involves heavy arsenic inputs to irrigated rice fields. Beside adsorption on soil colloids, iron–arsenic co-precipitation phenomena can affect arsenic retention in soils. In paddy fields of Satkhira District, Bangladesh, the study of the arsenic and iron forms in the irrigation waters and in soils at different times and distances from the irrigation well evidenced that a higher Fe/As ratio in the well water was related to a faster oxidation of Fe(II) and As(III) in water and to a close Fe–As association in soils, together with a greater accumulation of arsenic and poorly ordered iron oxides. The concentration of arsenic and of labile iron forms decreased with the distance from the well and with the depth, as well as the reversibility of arsenic binding. The fate of the arsenic added to the soils by irrigation hence resulted strongly influenced by iron–arsenic co-precipitation, depending on the Fe/As ratio in water. Irrigation systems favouring the sedimentation of the Fe–As flocks could help in protecting the rice from the adverse effects of dissolved arsenic.     

The effect of acidification,liming and reacidification on macrophyte development,water quality and sediment characteristics of soft-water lakes

Rapid expansion of Juncus bulbosus L. and the concomitant suppression of isoetid plant species has often been observed in acidifying soft water lakes in Western Europe. Experimental studies have shown that this mass development of J.bulbosus was caused by changes in the carbon and nitrogen budgets in these ecosystems. Acidification leads to temporarily strongly increased carbon dioxide (CO₂) levels in the slightly calcareous sediment and to accumulation of ammonium as a result of a reduced nitrification rate in acidifying waters. Many acidifying Scandinavian soft water lakes, however, have a well developed macrophyte vegetation. It is suggested that this is related with the non-calcareous sediments of these lakes. After liming, however, mass development of J. bulbosus and/or Sphagnum spec. has been observed in Swedish and S.W. Norwegian lakes. From field experiments it has become clear that part of the lime is deposited on the sediments leading to an increase of mineralisation rates, CO₂ production, sediment pore water levels of phosphate and ammonium and to a decrease of the nitrate concentrations in the sediment. These changes have been earlier observed in acidifying West European waters. Rooted species like J.bulbosus can only benefit from the higher nutrient levels in the sediment when the CO₂ level of the water layer is relatively high as this species is adapted to leaf carbon uptake. It is demonstrated that gradual reacidification by the acid water from the catchments and the increased flux of carbonic acid from the limed sediments to the overlying water leads to increased CO₂ levels in the water layer of the limed lakes already a few months after liming.     

Identifying unique populations in long-dispersal marine species: Gulfs as priority conservation areas

Identification of areas which should be a subject of protection is crucial for safeguarding the marine ecosystems. Amongst the reasons for protecting a region or location, the existence of unique populations or evolutionary significant units for one or more key species is a priority. The North American silver hake, Merluccius bilinearis, is currently managed as two stocks (northern and southern) without considering gulf areas separately. Employing microsatellite and mitochondrial markers we have detected significant F_ST values between hake individuals inhabiting gulfs and those distributed in the open sea, and asymmetric gene flow, higher from the gulf to the open sea than in the opposite direction. These differences can be interpreted as signals of separate populations in gulfs which may act as sources of variability for hake species. Occurrence of similar phenomena in Atlantic waters in both the northern and the southern Hemisphere, for these two pelagic–demersal hake species, suggests that gulfs may constitute a target for designing marine protected areas and confirms the adequacy of gulf-specific management already employed in Argentina.     

Modeling of arsenic immobilization by zero valent iron

Ground waters in geothermal regions contain arsenic concentrations that exceed the recommended drinking water standards. In addition, when these regions have agricultural activities, the waters also contain high levels of nitrates and phosphates. These contaminants can be removed from the water with the use of filters containing zero valent iron (ZVI). The objective of this study was to model the removal of arsenate (As(V)) and arsenite (As(III)) by ZVI and to model the effect of competing ions (phosphate and nitrate) on arsenate removal. Arsenic immobilization by ZVI columns was simulated by the HM-1D chemical transport and speciation model and an one-dimensional analytical solution model. Laboratory column studies were conducted in order to obtain representative experimental data for simulation with both models. Arsenic speciation and the presence of competing ions greatly affect arsenic removal by ZVI. Most arsenic is precipitated/co-precipitated on ZVI and on the corrosion products formed on ZVI. The simulations suggested that As(V) process parameters are higher than the As(III) parameters and that they are affected by the presence of nitrates and phosphates in the system. Such models can be used to design treatment units by incorporating the impact of nitrates and phosphates in the removal of arsenic by ZVI as well as the impact of temperature on the process.     

Presence of organoarsenicals used in cotton production in agricultural water and soil of the southern United States

Arsenicals have been used extensively in agriculture in the United States as insecticides and herbicides. Mono- and disodium methylarsonate and dimethylarsinic acid are organoarsenicals used to control weeds in cotton fields and as defoliation agents applied prior to cotton harvesting. Because the toxicity of most organoarsenicals is less than that of inorganic arsenic species, the introduction of these compounds into the environment might seem benign. However, biotic and abiotic degradation reactions can produce more problematic inorganic forms of arsenic, such as arsenite [As(III)] and arsenate [As(V)]. This study investigates the occurrences of these compounds in samples of soil and associated surface and groundwaters. Preliminary results show that surface water samples from cotton-producing areas have elevated concentrations of methylarsenic species (>10 microg of As/L) compared to background areas (<1 microg of As/L). Species transformations also occur between surface waters and adjacent soils and groundwaters, which also contain elevated arsenic. The data indicate that point sources of arsenic related to agriculture might be responsible for increased arsenic concentrations in local irrigation wells, although the elevated concentrations did not exceed the new (2002) arsenic maximum contaminant level of 10 microg/L in any of the wells sampled thus far.     

Molecular characterization and PCR detection of a nitrogen-fixing Pseudomonas strain promoting rice growth

Nitrogen-fixing plant growth-promoting rhizobacteria (PGPR) from the genus Pseudomonas have received little attention so far. In the present study, a nitrogen-fixing phytohormone-producing bacterial isolate from kallar grass (strain K1) was identified as Pseudomonas sp. by rrs (16S ribosomal RNA gene) sequence analysis. rrs identity level was high with an uncharacterized marine bacterium (99%), Pseudomonas sp. PCP2 (98%), uncultured bacteria (98%), and Pseudomonas alcaligenes (97%). Partial nifH gene amplified from strain K1 showed 93% and 91% sequence similarities to those of Azotobacter chroococcum and Pseudomonas stutzeri, respectively. The effect of Pseudomonas strain K1 on rice varieties Super Basmati and Basmati 385 was compared with those of three non-Pseudomonas nitrogen-fixing PGPR (Azospirillum brasilense strain Wb3, Azospirillum lipoferum strain N4 and Zoogloea strain Ky1) used as single-strain inoculants. Pseudomonas sp. K1 was detected in the rhizosphere of inoculated plants by enrichment culture in nitrogen-free growth medium, which was followed by observation under the microscope as well as by PCR using a rrs-specific primer. For both rice varieties, an increase in shoot biomass and/or grain yield over that of noninoculated control plants was recorded in each inoculated treatment. The effect of Pseudomonas strain K1 on grain yield was comparable to those of A. brasilense Wb3 and Zoogloea sp. Ky1 for both rice varieties. These results show that nitrogen-fixing pseudomonads deserve attention as potential PGPR inoculants for rice.     

Arsenic in the soil-natural water-plant system of the Altai region

The high natural content of total arsenic in the soil cover of the Altai region has been revealed. Natural waters and plants are distinguished by low arsenic concentrations. The intensity of the biogenic and water migration of arsenic does not depend on its total content in the soil. The accumulative distribution of arsenic in the mountainous forest soils of Altai is mainly due to biogenic processes, while in the steppe soils, it is specified by the evaporative concentration. Favorable conditions for arsenic migration are observed in the southeastern Altai during the periods of seasonal moistening. The arsenic content in the soils and plants of technogenic landscapes in the Altai region considerably exceeds the provisional permissible concentrations and the background concentrations of this element.     

A diazotrophic, indole-3-acetic acid-producing endophyte from wild cottonwood

An endophytic bacterium, wild poplar strain B (WPB), isolated from stems of wild cottonwood (Populus trichocarpa) was identified to Burkholderia vietnamiensis by analyzing the recA and rDNA genes. Phylogenetic analysis of the nifHDK cluster indicates that the WPB isolate shares high sequence similarity with known B. vietnamiensis strains. The nitrogenase activity of WPB was determined by a ¹⁵N₂ incorporation assay and an acetylene reduction assay. WPB was also monitored for production of indole-3-acetic acid (IAA), a phytohormone which can promote plant growth, when incubated with l-tryptophan. In addition, its plant growth promotion capacity was assessed by inoculating the WPB strain onto Kentucky bluegrass in nitrogen-free medium. Compared to uninoculated control plants, the plants inoculated with WPB gained more dry weight (42%, p = 0.01) and more nitrogen content (37%, p = 0.04) in 50 days.     

Wheat growth promotion through inoculation with an ammonium-excreting mutant of <Emphasis Type="Italic">Azospirillum brasilense</Emphasis>

Azospirillum brasilense is a diazotrophic bacterium and one of the best studied plant-growth-promoting bacterium living in close association with several agronomically important crops. The production of plant-growth-regulating substances is a main mechanism of plant growth stimulation, although other mechanisms have also been proposed. Nitrogen transfer from the bacterium to the plant is one among the other possible mechanisms of plant growth stimulation. In this study, we investigated, by means of a greenhouse trial with winter wheat inoculation, the effect of a point mutation in the ammonium binding site of the A. brasilense glutamine synthetase. The glutamine synthetase is one of the main ammonium-assimilating enzymes and mutations in this enzyme generally result in the release of ammonium from the bacterium to its environment. The ammonium-excreting mutant used in this study was shown to perform better than the wild-type A. brasilense strain with respect to wheat growth parameters and yield. In the greenhouse conditions used, this effect was independent of the way fertilizer was applied. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Arsenic Pollution in the Groundwater of Simav Plain, Turkey: Its Impact on Water Quality and Human Health

In this research, geological and hydrogeological studies were conducted to determine the source of high arsenic levels in the surficial aquifer of Simav Plain, Kutahya, Turkey. One of the two aquifer systems isolated in the study area was a deep confined aquifer composed of fractured metamorphic rocks that supply hot geothermal fluid. The other one was an unconfined alluvial aquifer, which developed within the graben area as a result of sediment deposition from the highlands. This aquifer serves as the primary water resource within the plain. A water quality sampling campaign conducted in 27 wells drilled in the surficial aquifer has yielded an average arsenic concentration of 99.1 µg/L with a maximum of 561.5 µg/L. Rock and sediment samples supported the fact that local metamorphic rocks contained significant amounts of sulfur minerals where arsenic-containing lenses are present inside. It was also determined that a Cu–Pb–Zn mine was operated in the past in the same formation. Arsenic-containing wastes of this mine were deposited near the Simav district center in an uncontrolled manner. This mined formation had arsenic levels reaching to levels as high as 660 mg/kg, which was found out to be the highest arsenic level in the area. Another potential arsenic source in the study area was the geothermal fluid that was used extensively in three geothermal fields with levels reaching to levels as high as 594 µg/L. Uncontrolled discharges of waste geothermal fluid and overexploitation of groundwater were also found to contribute to arsenic pollution in surface/subsurface waters of the plain. Thus, natural sources and anthropogenic influences of arsenic were found to create high concentrations in local water reserves of the area and influence human health. Consequently, death statistics from the 1995 to 2005 period collected from the area has revealed increased rates of gastrointestinal cancers above Turkish average.     

Differential colonization of Azospirillum lipoferum on roots of two varieties of rice (Oryza sativa L.)

Summary Seedlings of rice (IR42 and IR50) were aseptically dipped into Azospirillum lipoferum strain 34H suspension under dark, and the presence of bacteria on the differentiating regions of rice roots was observed by scanning electron microscopy. The bacterium did not colonize the root tips of IR42, while it colonized this region in the case of IR50, within 24 h after inoculation. In the early stages, most of the bacteria were embedded in the ruptured mucigel below the root cap cells of IR42. Mucigel was hardly detectable in IR50. While the root hair primordia of IR50 were colonized heavily with the bacterium within 24 h, the root hairs of IR42 were colonized 48 and 72 h after inoculation. This phenomenon in relation to plant varietal differences was discussed.     

Effect of earthworms on decomposition processes in raw humus forest soil: A microcosm study

Summary The earthworms Lumbricus rubellus (Hoffmeister) and Dendrobaena octaedra (Savigny) were studied in the laboratory to determine their effects on decomposition and nutrient cycling in coniferous forest soil. CO₂ evolution was monitored, and pH, PO ₄ ^3– –P, NH ₄ ⁺ –N, NO ₃ ^– –N, total N, and total C in the leaching waters were measured. After three destructive samplings, numbers of animals, mass loss, pH, and KCl-extractable nutrients were analysed.The earthworms clearly enhanced the mass loss of the substrate, especially that of litter. L. rubellus stimulated microbial respiration by 15–18%, whereas D. octaedra stimulated it only slightly. The worms significantly raised the pH of the leaching waters and the humus; L. rubellus raised the value by 0.2–0.6 pH units and D. octaedra by 0.1–0.4 units. Both worms increased N mineralization. Although the biomass of both worms decreased during the experiment, the N released from decomposing tissues did not explain the increase in N leached in the presence of earthworms. The worms influenced the level of PO ₄ ^3– –P only slightly.     

Blazing Towards the Next Millennium: Luciferase Fusions to Identify Genes Responsive to Environmental Stress

Contamination of the environment by toxic compounds is a problem of global concern and in addressing this problem, it is necessary to identify the mechanisms by which specific agents exert their toxic effects, and develop effective, inexpensive strategies for detecting compounds in their biologically active and available form. We have used reporter gene fusion technology to identify genes, in the genetically well-characterized bacterium Escherichia coli, whose expression is affected by specific environmental toxins. As an added benefit of our approach, we have elaborated methods to use these gene fusion clones as biosensors to detect specific toxic agents, such as arsenic oxyanions. Arsenic is an abundant and useful element which is also an environmental toxin that can pose severe risks to health. Arsenic toxicity varies with oxidation state, organometallic form, and bioavailability. The Escherichia coli arsB fusion strains respond specifically to arsenic in its toxic, oxyanionic form, and can detect bioavailable amounts of these oxyanions in contaminated water samples. Combinations of different biosensor clones and assay automation will augment the use of luminescent biosensors for the detection of specific toxic agents in the environment.     

A new plant-based bioassay for aquatic sediments

Background, Goal and Scope  To date, standardised bioassays for the assessment of the ecotoxicological potential in sediments and dredged material use test organisms like bacteria, algae and crustaceae. This paper presents the development and application of a novel sediment contact test (whole sediment) withMyriophyllum aquaticum, a representative of rooted aquatic macrophytes. The aim of the present study is to demonstrate the value of a sediment contact test with rooted macrophytes as a supplement to existing test batteries in order to improve the assessment of sediment toxicity. Methods  The newly developed sediment contact test withMyriophylhim aquaticum was applied to natural whole sediments. For performing the test, whorls ofMyriophyllum aquaticum were directly planted in the native sediment and incubated in the light at 24°C (cf. section results and discussion). The end points of the test were the number of the shoots and the fresh weight of the whole plants. The duckweed growth inhibition test withLemna minor according to ISO/DIS 20079 was performed in pore waters from sediment samples. The results of the sediment contact test withMyriophyllum aquaticum were compared with each other and with those of the aquatic duckweed test. Results and Discussion  A test protocol for the new plant-based sediment contact test using the aquatic plantMyriophyllum aquaticum as an indicator was developed. The best control sediment proved to be the OECD sediment (OECD 207). A test period of 10 days appeared to be sufficient for the test. The increase of biomass and the derived growth rate were found to be the most suitable evaluation parameters. The growth behaviour ofMyriophyllum aquaticum differed depending on the origin of sediments. Therefore, plant-affecting contamination, that is bound in sediments, was indicated. Conclusions  The novel sediment contact test withMyriophyllum aquaticum can indicate phytotoxic effects in sediments. Therefore, it allows a better assessment of the overall-toxicity in whole sediments. Recommendations and Outlook  The sediment contact test withMyriophyllum aquaticum is a valuable tool for the evaluation of the ecotoxicological risk potential of waters and sediments. It should become a complement to a standardised test battery generally used for the assessment of sediment toxicity.     

Condition factor and whole-body sodium concentrations in a freshwater fish: Evidence for acidification stress and possible ionoregulatory over-compensation

Condition factor, K, was measured for 1202 blacknose dace (Rhinichthys atratulus) from three streams in Shenandoah National Park (USA) of different acid neutralizing capacities (ANCs). K is a ratio of weight standardized to length; it is an indication of the health of the individuals in a population. R. atratulus condition factor in the low-ANC stream was found to be significantly lower (11%) than that of dace measured for fish from the intermediate- and high-ANC streams. This difference, according to the results of related investigations, is likely to be biologically significant. Whole-body sodium concentrations were measured as an additional test of sublethal stress in these streams. During summer base flow conditions, mean whole-body sodium concentrations of adult R. atratulus maintained in cages were found to be highest in the low-ANC stream and lowest in the high-ANC stream. The lower condition factor of dace in the low-ANC stream may be related to whole-body sodium concentration and ion regulation. Ion regulation in the low-ANC stream may be more metabolically costly because of chronic sublethal pH stress. R. atratulus may maintain high body Na⁺ concentrations in low ANC- and ionic strength waters in order to provide a buffer against large episodic pH depressions. The metabolic cost of this ionoregulatory over-compensation may necessitate the diversion of energy from somatic growth and explain the poorer condition of fish from such waters.