基于Ypt1基因为靶标的木香疫病病组织及病田土壤分子检测技术

A species-specific PCR assay was established for rapid and accurate detection of the oomycete pathogen Phytophthora tentaculata in diseased plant tissues and infected soil.A pair of species-specific primers Pt1/Pt2 were designed on the basis of Ras-related protein(Ypt1) gene sequences of the Phytophthora species.PCR amplification with the Pt primers resulted in a 386 bp product only from isolates of P.tentaculata.The detection threshold with Pt primers was 100 pg of genomic DNA.A nested PCR procedure was developed using Ypt1F/Ypt1R as the first-round amplification primers and Pt1/Pt2 as the second-round primers,which increased the detection sensitivity 100-fold to 1 pg.PCR using these Pt primers can also be used to detect P.tentaculata in naturally infected plant tissues and soil.The PCR-based method developed in this study provides a rapid and sensitive tool for detection of P.tentaculata.     

土壤中棉花黄萎病菌快速检测技术研究

 Verticillium wilt,caused by Verticillium dahliae,is the most important disease of cotton.In this work,the previously developed defoliating(D) and nondefoliating(ND) V.dahliae-specific primers were adopted for detection of pathotypes of V.dahliae in soil by using nested PCR.The results showed that the detection assay was efficient when used in infested soil and was an useful technique for rapid and accurate assessment of soil contamination by V.dahliae.     

北京地区柴胡根腐病的病原菌鉴定

 Root rot disease is one of the most important diseases of Bupleurum chinense DC..Pure isolates from host tissues were obtained.The results of pathogenicity test,morphology observation and ITS sequence analysis indicated that the disease was caused by Fusarium oxysporum.     

湖南水稻上1种新矮缩病的病原研究

 Summer rice was suffered extensive damage from a new dwarf disease in Hunan Province in year 2009. In this study, the causal agent of this disease was confirmed as Southern rice black-streaked dwarf virus (SRBSDV) by nested RT-PCR, RT-PCR and PCR product sequencing.     

海南长春花黄化病植原体的16S rDNA序列分析研究

 Periwinkle(Catharanthus roseus) yellows is a common disease in Hainan. Periwinkle's leaf tissue with symptoms was assayed for phytoplasma infection by using PCR assay employing phytoplasma universal 16S rRNA gene primers (Rl6mF2/Rl6mR1). A PCR product (about 1.4 kb) was amplified from periwinkle showed yellows. Nucleotide sequencing and phylogenetic tree analysis showed that the amplified 16S rDNA contained 1 432 nucleotides, the most homology was 98.1% with the members of elm yellows group (16S r Ⅴ) and clustered in the same clade, while it was under 96.1% with other phytoplasma groups. Our results suggested that the phytoplasma sample belonged to 16S rⅤgroup and was tentatively named as Hainan periwinkle yellows phytoplasma (PY-Hn). This is the first report of existence of 16S r Ⅴ group phytoplasma in naturally infected periwinkle.     

生物土壤添加剂对连作黄瓜防御酶系及酚类物质含量的影响

 The changes of several defense enzyme activities and phenolic compound in cucumber roots were examined after biological soil amendment(BSA) was applied to the cucumber continuous cropping through pot trials.It could promote seedling growth and reduce disease incidence.The results showed that the activities of defense enzymes such as peroxidase(POD),polyphenol oxidase(PPO) and TTC in treated cucumber roots were measured significantly higher than that of control.The activities of POD and PPO in BSA-treated roots were significantly higher than that of control after inoculation with Fusarium oxysporum(Schl.)f.sp.Cucumerinum.Phenolic compound content of roots decreased in the initial period of inoculation,increased after di-sease incidence,but it was higher in BSA-treated than that of control.These indicated that BSA could induce the defense enzyme activities and increased phenolic compound in cucumber roots.     

土壤中烟草根黑腐病菌的实时定量PCR检测技术研究

 Thielaviopsis basicola is a soil-borne plant pathogen which causes root rot disease in tobacco plants. Detection and monitoring of T. basicolain soil is of great significance to control this disease. Based on the differences in internal transcribed spacer (ITS) sequences of T. basicola and other fungal pathogens, a specific primer pair Tb1/Tb2 for T. basicolawas developed. The results showed that the primer pair gave a single amplicon of 330 bp from T. basicola and revealed no undesirable cross-reaction with other seven soil-borne pathogen isolates and three tobacco rhizosphere dominant fungi isolates. With a series of 10-fold genomic DNA dilutions of T. basicola, the detection limit of 1 pg/μL in conventional PCRand100 fg/μL in real-time quantitative PCR was achieved. With DNA from the soil inoculated with different numbers of T. basicola conidia, the detection limit was 10 conidia per reaction in conventional PCR and 0.4 conidia per reaction in real-time quantitative PCR.     

云南甘蔗宿根矮化病调查及种茎温水处理脱菌效果检测

 Based on the specific primer from the nucleotide sequences between 16S-23S rDNA, Polymerase chain reaction (PCR) approach for detecting Leifsonia xyli subsp. xyli (Lxx) was established. The approach was applied to detect Lxx from 30 cultivars collected from two main sugar cane producing areas in Yunnan and 10 hot-water treatment samples. The results showed that 80% of the cultivars were infected by Lxx and hot-water treatment was proved to be an efficient measure to control but not completely eliminate Lxx in sugar cane tissues. The PCR products amplified from six infected cultivars were cloned and sequenced, six sequences were acquired and analyzed. It indicated that the six sequences were identical and showed 100% similarity with the isolates from Brazil, Australia and Fujian, and 99.54% with the isolate from Louisiana.     

安徽桑黄花型萎缩病植原体16S rDNA序列分析及分子检测

 Mulberry yellow dwarf(MYD)disease is an quarantine disease and the causal agent is a phytoplasma.Two pairs of published universal primer, P1/P7 and Rm16F2/Rm16R1, based on the 16S-23S rDNA sequence of phytoplasma and total DNA extracted from infected mulberry tissues were employed for PCR and nested-PCR detection.The results revealed that a phytoplasma-specific 1 830 bp fragment with a G+C content of 46.01% was sequenced(GenBank accession No.GQ249410).The sequence shared 99.7% and 99.8% identity with aster yellows, the representatiive phytoplasma in 16SrI group, and mulberry dwarf phytoplasma classified into subgroup B in 16SrI group and named as the MYD phytoplasma strain Anhui(MYD-Anh).A phylogenetic tree based on 16S rDNA sequences was constructed and showed that MYD-Anh was clustered into 16SrI group.Identity of 16S rDNA sequence between MYD-Anh and mulberry yellow dwarf phytoplasma strain Zhenjiang(MD-zj) was nearly 100%, and they might belong to the same strain.Nested-PCR was used to detect the pathogenic phytoplasma from the differential tissues of mulberry infected with MYD-Anh.The results showed that a phytoplasma-specific 1.4 kb fragment was amplified with total DNA extracted from bark and vein.Nested-PCR was more sensitive than PCR for detecting MYD phytoplasma.     

西瓜种传镰刀菌形态和分子鉴定及其对种子发芽的影响

 采用洗涤检验法和PDA培养基法,从京欣一号和新京欣一号西瓜种子的种壳上分离得到镰刀菌,通过形态学观察和分子检测进行了鉴定,并研究了其对种子发芽的影响。通过菌落形态、色素颜色、菌落生长速率、大型分生孢子、小型分生孢子、厚垣孢子以及分生孢子梗等形态学观察,初步认为其为尖孢镰刀菌;采用真菌rDNA ITS区的通用引物、镰刀菌属特异性引物和尖孢镰刀菌特异性引物对其DNA进行PCR扩增,PCR产物经连接转化并验证后测序,将测序结果登录GenBank进行BLAST分析,分子检测结果与形态学观察结果一致,表明西瓜种子种壳携带的镰刀菌为尖孢镰刀菌,此结果为国内首次报道。用种传尖孢镰刀菌孢子悬浮液处理西瓜种子后,发芽势、发芽率和发芽指数均显著降低。     

瓜黑星病菌、枯萎病菌和蔓枯病菌的三重PCR检测

通过测定黄瓜黑星病菌(Cladosporium cucumerinum)rDNA的ITS序列,比对近缘种及瓜类几种重要病原菌的ITS序列,设计出特异性引物HX-1/HX-2,经过对引物HX-1/HX-2PCR条件的优化,可以扩增出1条190bp的黄瓜黑星病菌特异性DNA条带,灵敏度达到1pg/μL。进一步将引物HX-1/HX-2和瓜类枯萎病菌、瓜类蔓枯病菌特异检测引物Fn-1/Fn-2、Mn-1/Mn-2组合,建立三重PCR体系,可一次检测出瓜类黑星病菌、瓜类枯萎病菌、瓜类蔓枯病菌3种瓜类植物重要的病原菌。建立了可以应用于田间瓜类黑星病菌PCR检测技术和瓜类主要病害三重PCR检测技术,对瓜类病害的诊断和防治具有重要的指导作用。     

河北廊坊大豆枯萎病病原镰刀菌的分子鉴定

 为明确河北廊坊中国农科院植保所试验基地大豆孢囊线虫病田内大豆枯萎病病原镰刀菌的种类,对362份罹病枯萎大豆植株进行病原真菌分离,得到335株真菌;使用镰刀菌通用引物鉴定出镰刀菌(Fusarium spp.) 279株,占分离菌株83.3%;镰刀菌特异性引物、测序等分子生物学技术结合形态学特征进一步鉴定镰刀菌种类,鉴定出尖孢镰刀菌(F. oxysporum)189株,占分离菌株56.4%;茄病镰刀菌(F. solani)67株占20.0%、禾谷镰刀菌(F. graminearum)16株占4.8%、木贼镰刀菌(F. equiseti)3株、层出镰刀菌(F. proliferaum)2株、燕麦镰刀菌(F. avenaceum)和厚孢镰刀菌(F. chlamydosporum)各1株;致病性测试结果表明数量最多的尖孢镰刀菌(F. oxysporum)中约92.8%菌株具有不同程度的致病力;这些结果表明该试验基地大豆枯萎病的优势病原菌为尖孢镰刀菌(F. oxysporum);研究结果可为大豆枯萎病的防治提供科学依据,并为大豆孢囊线虫与尖孢镰刀菌复合侵染大豆的研究奠定基础。     

引起黑龙江省大豆根腐病的镰刀菌种类鉴定及致病分析

<正>大豆是黑龙江省四大主要粮食作物之一，种植面积和产量均居全国首位。 大豆根腐病是一种世界性的土传病害[1],主要侵染大豆茎基部至根部，引起根茎腐烂，一般田块减产 10%～30%,重病田块减产达 60%以上，严重时甚至造成绝产[2]。由镰刀菌引起的大豆根腐病是大豆生产上的重要病害 [3]。2017 —2018年，对黑龙江省富裕县、讷河市、五大连池市、北安市、克东县、拜泉县、海伦市、望奎县、林口、牡丹江、尚志、     

甘蓝枯萎病病原菌的鉴定

 采用温室接种致病性测定、形态学观察和分子鉴定方法对甘蓝枯萎病病原进行了研究。从北京市延庆县9个甘蓝生产基地采集甘蓝枯萎病病样96份,分离获得来自甘蓝病株根、短缩茎、叶片等器官的30个真菌分离物。经过致病性试验证实,分离物GLW3和GLW8为甘蓝枯萎病病原菌。经形态学鉴定,GLW3为尖孢镰刀菌(Fusarium oxysporum),GLW8为轮枝样镰刀菌(Fusarium verticillioides)。利用镰刀菌的核糖体DNA(rDNA)内转录间隔区(internal transcribed spacer,ITS)的保守性和变异性,分别采用真菌通用引物和镰刀菌属及轮枝样镰刀菌特异性引物对GLW3和GLW8进行PCR扩增,并将测序结果在GenBank中进行同源性比对分析,分子鉴定与形态学鉴定结果一致。轮枝样镰刀菌作为甘蓝枯萎病的病原菌系首次报道。     

番茄枯萎病致病镰刀菌种类鉴定及优势种群的研究

<正>镰刀菌(Fusarium spp.)是真菌的一个重要属,分布极为广泛,是多种重要植物的病原菌。其中,由致病性尖孢镰刀菌(Fusarium oxysporum)侵染引起的植物枯萎病是一种世界性的土传真菌病害。病菌从植物根部侵入,扩展进入维管束,造成植株枯死,在植株的全生育期均可发生,给生产带来了巨大的损失。国内外已报道的被严重为害的作物有棉花、甘蔗、香蕉、番茄、黄瓜、哈密瓜、西瓜、大     

引起河北省保定市白术根腐病的病原镰刀菌种类鉴定

In order to identify the pathogenic fungi of Atractylodes macrocephala root rot in Baoding, Hebei Province, eighty strains of Fusarium species were isolated from 120 A. macrocephala plants with root rot symptoms with the isolation frequency at 66.7%. Fusarium species were identified by molecular techniques with specific primers, TEF-1α gene sequencing together with morphological characteristics. Thirty-nine F. solani strains were identified with the highest percentage at 48.8%, and 32 F. oxysporum strains were isolated with the percentage at 40.0%. Seven F. equiseti and two F. brachygibbosum strains accounted for 8.8% and 2.5%, respectively. The pathogenicity test on A. macrocephala showed that F. solani and F. oxysporum caused the typical symptoms of root rot. Koch's postulates were fulfilled following re-isolation and identification of the isolates of F. solani and F. oxysporum. Taken together, the results showed that F. solani and F. oxysporum were the pathogens of A. macrocephala root rot in Baoding, Hebei Province.     

京津冀设施大棚根际土壤中筛选出的防治根腐病的生防镰孢菌

 由致病性尖孢镰孢菌(Fusarium oxysporum)引起的根腐病严重危害果蔬生产,但非致病性镰孢菌可作为潜在的生防菌。为筛选防治根腐病的非致病生防镰孢菌,从京津冀设施大棚采集茄科、葫芦科果蔬78份根际土样中分离2 402株真菌,筛选出对致病性尖孢镰孢菌(F. oxysporum)具有拮抗效果的真菌173株。利用镰孢菌通用引物进行PCR扩增,从中筛选出28株候选镰孢菌;通过镰孢菌发酵液泡根进行安全性测试,筛选出对寄主黄瓜幼苗安全无害的镰孢菌菌株4株(1418、1441、1436和1473)。进一步通过镰孢菌测序通用引物TEF1αF/TEF1αR结合菌落和分生孢子的形态学特征,1418菌株和1441菌株被鉴定为尖孢镰孢菌(F. oxysporum)、1436菌株被鉴定为茄病镰孢菌(F. solani)。盆栽测试发现,除1441菌株外,1418菌株、1436菌株和1473菌株对黄瓜根腐病的防效均在50%以上,其中1418菌株的防效为70%,与杀菌剂咪酰胺的防效相当,具有很好的应用潜力。本研究筛选获得的具有生防潜力的镰孢菌不仅为镰孢菌致病力分化的研究提供了实验材料,也为新型生防产品的研制奠定了基础。     

大豆猝死综合症病原菌北美种的PCR鉴定

 应用等位基因特异性PCR(allele-specific PCR,AS-PCR)技术,建立了大豆猝死综合症(sudden death syndrome of soybean,SDS)病原菌北美种Fusarium virguliforme与其近似种Fusarium phaseoli(菜豆根腐病菌)的鉴别方法。针对翻译延长因子(EF-1α)基因上的3个SNP(单核苷酸多态性)位点,参照引物设计原则和等位基因特异引物(allele-specific primer,ASP)的要求设计了1对引物Fsg-α-1/2,能特异地扩增F.virguliforme,产生327 bp的电泳条带。另外,根据ITS区序列设计了1对通用引物Fu1/2,能扩增F.virguliforme和F.phaseoli,产生452 bp的电泳条带。本实验在传统的AS-PCR基础上进行改进,引入Fu1/2作为阳性质控引物,将ASP的特异性与双重PCR的严谨性相结合,建立了简便可靠的SDS病原菌鉴定方法。     

甘蓝枯萎病菌1号和2号生理小种的快速检测与鉴定

 甘蓝枯萎病菌生理小种传统鉴定方法费时费力,不能满足生产的要求,因此需要建立一种快速、可靠的分子检测技术。本研究在甘蓝枯萎病菌1号和2号生理小种基因组测序的基础上,通过比较基因组学方法筛选1、2号生理小种各自的特异基因片段并设计引物,并分别以10个甘蓝枯萎病菌1号生理小种菌株、2个2号生理小种菌株、7个尖孢镰刀菌其他专化型菌株及4个外围菌株DNA为模板进行常规PCR扩增,筛选出甘蓝枯萎病菌1号和2号生理小种特异性引物,同时引入尖孢镰刀菌通用引物W106R/W106S,建立起一步三重PCR检测甘蓝枯萎病菌1、2号生理小种的分子检测技术。结果表明,该分子检测技术实现了在一次PCR反应中快速、准确地同步检测出甘蓝枯萎病菌DNA、罹病甘蓝组织和土壤中的甘蓝枯萎病菌1号和2号生理小种,对检测甘蓝植株是否感染枯萎菌及甘蓝种植区土壤是否受到枯萎菌的污染有实用价值。