Genetic diversity of genus <Emphasis Type="Italic">Malus</Emphasis> Mill. for scab resistance genes

The results of molecular genetic analysis of wild species and varieties of genus Malus Mill. for loci of monogenic scab resistance are presented. Dominant allele of gene Rvi6 was identified in varieties of M. robusta 43199, M. hupehensis, and M. floribunda. Locus Rvi4 was detected in genotypes of M. robusta v. persicifolia, M. asiatica 2343, M. sieversii 13280, M. niedzwetzkyana 13279, M. purpurea 2392, M. orientalis 41623, M. orientalis 29476, M. orientalis 29 460, M. spectabilis v. albi plena, and M. spectabilis v. rubra plena. Gene Rvi5 in the test collection of wild species is absent.     

Distribution of Fungi from the Genus <Emphasis Type="Italic">Fusarium</Emphasis> Link. on Cereals

The species composition of fungi from the genus Fusarium was studied, and the frequency of occurrence on cereals was determined. Populations of Fusarium spp. were represented by widespread species F. culmorum, F. heterosporum, F. sporotrichioides, F. oxysporum, F. nivale, F. graminearum, F. avenacеum, F. gibbosum, F. sambucinum, F. moniliforme, etc. The dynamics and frequency of occurrence of Fusarium spp. has made it possible to characterize the state of the species of fungi in a wide range of climatic areas of cereal cultivation in the Russian regions. The prevalence of the genus Fusarium was caused by the cultivars’ susceptibility to micromycetes. The frequency of occurrence of Fusarium species isolated from roots was steady, and, on the ears, it depended on the influence of weather conditions during the growing season of plants. The study of the intraspecific variability of fungi from the genus Fusarium has revealed a significant difference in signs of toxicity and pathogenicity depending on biotic and abiotic factors. More than 50% of strains from the genus Fusarium possessed low pathogenicity but had severe toxicity to wheat seedlings. Most strains of F. sporotrichiodes, F. culmorum, and F. sambucinum were highly pathogenic (from 36.4 to 55.6%) and toxic (from 55.6 to 81.3%). High adaptability to preservation in the soil and on the roots of weeds and crop residues of most crops expressing pathogenic and toxic activity was conductive to the widespread Fusarium spp.     

Effect of <Emphasis Type="Italic">GH</Emphasis> and <Emphasis Type="Italic">DGAT1</Emphasis> gene polymorphism on feeding qualities of bull calves

The aim of this paper is to study effects of GH and DGAT1 gene polymorphisms on feeding qualities of Hereford and Limousin bull calves bred in conditions of the Cis-Ural steppe zone. SNPs of genes GH and DGAT1 are investigated by polymerase chain reaction (PCR) and DNA restriction fragment length polymorphism (RFLP). The studied population of animals was assessed by defining the allele frequency and animal genotype occurrence for the studied gene SNPs, indicators of the actual and expected heterozygosity, and Pearson’s test. A study of polymorphism C214G of gene GH revealed that genotype LL prevails in Hereford and Limousin animals, 47.37 and 57.7%, respectively, while frequency of allele L is higher in Limousin bull calves (0.731). A study of polymorphism K232A of gene DGAT1 gene in both the populations showed absence of genotypes AA, which can be related to the low number of the studied animals. Expected heterozygosity indicators of gene GH are higher than the observed ones, and the observed heterozygosity is higher for DGAT1. The number of efficient alleles for the studied genes is higher for Hereford bull calves. In general, according to Pearson’s test, both the studied populations are in equilibrium. There is a significant effect of GH gene polymorphism on live weight gain rates at the end of sagination and total and average daily weight gains during animal raising.     

The Relationship between Drought Tolerance of <Emphasis Type="Italic">Laurus nobilis</Emphasis> L. and Environmental Factors in Conditions of the Southern Coast of Crimea

The present studies have shown Laurus nobilis L. to be a drought tolerant species. When the plant was first subjected to dehydration, the rate of net photosynthesis decreased from Pn = (8–10) to –1 μmol/(m² s) and to –3 μmol/(m² s) during the second dehydration before it was subsequently irrigated. The rewatering on August 5 and August 8 promoted a sharp burst of this parameter, but the Pn value was restored to its original level only after August 8. Soil drought caused a drop in a rate of transpiration from 65–70 to 10 mg/(m² s). Watering soil up to a 15% moisture level brought an increase in E = 25 mg/(m² s), but only the second watering managed to fully restore it to the initial value. Apical growth of the plants was closely correlated with soil moisture. As the soil moisture was reduced to W = 15–5%, the terminal growth reached a saturation point and started to plateau. Watering the soil up to W = 15% promoted apical growth by 4 mm. Reducing soil moisture to W = 3–4% caused a complete cessation of the growth. Subsequent watering to W = 27–28% led to a gradual and complete recovery of turgor and an increase in the growth rate up to 6–8 mm per day. The surface response functions Pn = f(I, W) and E = f(I, W) allowed us to determine conditions and levels of potential maximums and boundaries of the areas of optimum photosynthesis and transpiration: optimum Pn = 8–9 μmol/(m² s) with I = 900–1400 μmol/(m² s) and W = 17–24% and the optimum E = 25–35 mg/(m² s) with I = 1000–1400 μmol/(m² s) and W = 16–24%.     

Effect of the <Emphasis Type="Italic">PGR</Emphasis> Genotype on Economically Valuable Traits in Animals of the Holstein Breed

Genotyping for locus PGR (progesterone receptor gene) of the Holstein servicing bulls (World Wide Sires) was carried out. The frequencies of alleles and genotypes of this locus are given. Significant (P < 0.05) superiority of the homozygous genotype AA of locus PGR was found in relation to the heterozygous genotype AG for several economically valuable traits: PTAM (predicted transmitting ability for milk, 380 points), PL (productive life, by 1.3 months), and FE (feed cost–feeding efficiency index, 37 points). Significant superiority (P < 0.05) of the homozygous genotype GG over the heterozygous genotype AG for the PL trait was also found, by 1.2 months. The obtained data can be used for marker-dependent breeding.     

Use of molecular markers of potato golden nematode resistance genes <Emphasis Type="Italic">H1</Emphasis> and <Emphasis Type="Italic">GRO1</Emphasis>

By means of DNA markers of potato golden nematode resistance genes H1 and Gro1, 109 Russian- and foreign-bred potato varieties are assessed. A sufficiently high level of coincidence of the presence of marker alleles with phenotypic resistance of potato varieties is revealed. However, not all resistant forms have specific amplification products. The use of DNA markers of only two genes H1 and Gro1 will not make it possible to completely replace mass laboratory testing, but it will make it possible to select potato forms resistant to this parasite by a simple and reliable method in a shorter time and thereby to considerably reduce the number of genotypes in the sample for further breeding.     

Genetic Diversity of <Emphasis Type="Italic">E. coli O157:H7</Emphasis> Isolated from Some Leafy Greens,Irrigated by Aleppo River,Using Random Amplified Polymorphic DNA (RAPD) Marker

In recent years, fresh fruits and vegetables have been linked to numerous foodborne illness outbreaks in different regions of the world. In Syria, there is not a lot of research that study E. coli and its serotypes by PCR technology. In this study, we have fulfilled a total count of bacteria, the census total coliform group, and Escherichia coli, as well as the serotype E. coli O157:H7 on some leafy greens (Spinacia oleracea, Beta vulgaris) irrigated by Aleppo River. The molecular characterization was done for ten strains of E. coli isolated from collected samples. The samples were inoculated on blood agar and suspicious colonies, then transferred to EMB and MacConkey agar using a primer (COL 1) in RAPD technic. Molecular characterization also performed ten strains of serotype E. coli O157:H7 isolated in medium (Sorbitol-MacCONKEY Agar), then by primers (OPA-03, OPA-13 OPC-12, OPE-20) in RAPD technic. The results showed significant differences between collected samples. The total count of bacteria in the first site (Handarat) for spinach and chard were the lowest, but in the fourth site (Jezraya) it was the highest among all samples. The results showed also the existence of E. coli in all sites except the first one in riverbed Handarat, and E. coli O157:H7 was found only in Jezraya village. Extracted DNA from samples was amplified by RAPD. after electrophoresis in the gel agarose, eleven different bands were detected from isolated strains of E. coli. These results refer to the great genetic diversity of Escherichia coli. For serotype E. coli O157:H7 thirty-four different bands were detected. RAPD analysis had the high discriminatory capacity for typing E. coli isolates. Because of its simplicity and rapidity, RAPD analysis appears to be a highly valuable tool for studying E. coli molecular epidemiology.     

Characteristics of interspecific hybrids between <Emphasis Type="Italic">Pleurotus ostreatus</Emphasis> and <Emphasis Type="Italic">P. eryngii</Emphasis>

In this study, three species of oyster mushroom (Pleurotus osturatus, P. eryngii and P. cornucopia) were crossed together in order to aggregate benefit special attributes to the genotype (s). The monokaryon of each of these species was prepared. Then, the monokaryons of two species were placed at 5 mm distance from each other to produce dikaryon. The results showed that, from among 700 crosses, only the crosses of eryngii and osturatus monokaryons were grown toward each other and produced clamps (dikaryons). Four produced hybrids were noted H₁, H₃₂, H₁₁ and H₄₀. The spans of produced hybrids were prepared; then, they were grown into sterile media and attributions of hybrids were studied. The results indicated that H₁₁ hybrid was an appropriate hybrid in terms of the number of days until growing, number of days until the observation of the first pin and the days from planting to harvest. However, H₄₀ was the best hybrid based on cap diameter, dry and fresh weight of fruit body, yield and biomass. It is expected that these interspecific hybrids employ for future oyster mushroom breeding programs.     

Founder effect and genogeography of <Emphasis Type="Italic">CV</Emphasis>- and <Emphasis Type="Italic">BL</Emphasis>-mutations in black-and-white cattle

The results are obtained by simultaneous diagnostics of mutant CV- and BL-alleles. Five groups of animals–carriers and noncarriers of mutations are identified. In Russia the mutant CV-alleles are met more frequently because of the intensive use of their carriers. While elimination of BL-allele was started earlier due to developed methods, the diagnostics of CV-mutations has been undertaken later. Propagation of missense-mutations in the world and the Russian Federation has been occurring through the breeding bulls and cows–carriers. Initially spermobanks and, afterwards, cows were reserves for the diagnosed BLand CV-mutations.     

Genetic shifts in selection of hybrid offspring soybeans to economic-valuable signs

The article presents the importance of plant genetic hybrid shift in the elements of productivity, allowing the prediction of the conduct in the selection of promising lines obtained by interspecific hybridization spontaneous soybeans for further study in the selection process. The maximum shift of genetic selection on the basis of elements of efficiency in terms of the number of marked beans in combinations Volzhan × KZ-671, KZ-Rosinka × 1236, and Luch nadezhdy × KZ-6332 in terms of the mass of 1000 seeds only in the combination Luch nadezhdy × KZ-6332.     

Intervalent Crosses: the Main Way of Creating Triploid Apple Cultivars

This paper presents history and ways of creating triploid apple cultivars differing from common diploid ones by less pronounced fruiting periodicity by years, higher marketability and weight of fruits, and self-fertility. In the search for an effective method of mass production of triploid seedlings, crosses of the type 4x × 4x, 4x × 3x, 4x × 2x, 3x × 4x, 3x × 3x, 3x × 2x, 2x × 4x, and 2x × 3x were studied. The most effective way of mass production of triploid seedlings was the 2x × 4x cross (diploid × tetraploid). In the group of 2x × 4x crosses, more than 9000 seedlings from different families were subjected to cytological analysis. The ratio of hybrid progeny in terms of ploidy levels was as follows: 30.3% diploids, 69.5% triploids, 0.2% tetraploids, and 0.04% aneuploids. It was established that triploids can also be obtained in 4x × 2x crosses; however, it is necessary to castrate the flowers in the maternal parent, since all apple tetraploids have high self-fertility. For the first time in the world, a series of triploid cultivars (approximately 20) was obtained from intervalent crosses of the diploid × tetraploid type in the All-Russia Research Institute of Fruit Crop Selection. Particularly interesting are triploid cultivars that have immunity to scab, which include nine cultivars, of which Aleksandr Boiko, Vavilovskoe, Maslovskoe, and Yablochnyi Spas are included in the State Register of breeding achievements allowed for use.     

Breed characteristics associated with <Emphasis Type="Italic">LEP</Emphasis> gene polymorphisms in Holstein cattle

Genotyping of the leptin gene locus (LEP) (SNP: R25C, Y7F, and A80V) has been performed in the animals from two groups in the Holstein cattle herd. Groups 1 and 2 included the fourth to seventh lactation cows and the heifers, respectively. The objective of the surveys was to study the Holstein cattle polymorphisms of the leptin gene associated with the productive longevity according to the related literature data. It has been ascertained that the LEP gene (SNP: R25C, Y7F, and A80V) polymorphism in the Holstein animals determines the certain breed characteristics that can be used for introduction to marker assisted selection. (Particularly, a low (0.04–0.15) frequency of occurrence of the F allele is typical for the LEP-Y7F SNP; as for SNP LEP-A80V, a low frequency of occurrence (0–0.14) is typical for the homozygous animals with the VV genotype when compared to a rather high frequency of occurrence (0.36–0.45) in the heterozygous animals).     

Influence of polymorphism of <Emphasis Type="Italic">R25C</Emphasis> and <Emphasis Type="Italic">Y7F</Emphasis> loci of the leptin gene on the duration of economic use of the Ayrshire cattle

Two successive genotypings (in 2014 and 2017) of the leptin gene (LEP) by the R25C and Y7F loci were conducted in the herd of the Ayrshire cattle of the Niva Farm of Krasnodar Krai in order to study the influence of polymorphism of these loci on the duration of the economic use. DNA samples (n = 154) isolated from blood of animals with different periods of economic use have been analyzed. The need for genotyping in 2017 arose because of the ambiguous interpretation of the findings obtained in 2014. A higher frequency of occurrence of the RR genotype of the LEP in the group of long-livers could be explained both by better preservation of animals with the RR genotype and by random gene drift (in particular, by larger share of breeder bulls, the carriers of the R allele). It was found that, as in 2014, a group of long-liver cows genotyped in 2017 differed from the group of young cows genotyped in 2014 in the occurrence frequency of the RR genotype, which was doubled. Consequently, regardless of the experimental conditions, animals of this particular group may have a longer productive life. It has also been established that the polymorphism at the Y7F locus does not have a significant effect on the duration of the economic use of the Ayrshire cows.     

Endophytes from maize with plant growth promotion and biocontrol activity under drought stress

In the present study, 39 endophytic bacteria were isolated from different crops with main focus on maize roots and seeds. Endophytes were screened for drought stress tolerance, plant growth promoting (PGP) traits and antifungal activity. Out of 39 isolates, 32 could show drought tolerance up to–1.02 matric potential (MPa) and exhibited most of the plant growth promoting traits. But, only five isolates could show antagonistic activity against plant fungal pathogens. Based on the results, 10 promising isolates namely FTR, NFTR, FMZR9, FMZR2, MZ30V92, MRC12, MRC31, MRC33, MRC41 and MRR2 were selected and identified using biochemical and 16S rDNA gene sequencing as Pseudomonas aeruginosa (strains FTR and NFTR), Pseudomonas monteilii (strain FMZR2), Pseudomonas putida (strain FMZR9), Acitenobacter brumalii (strain MZ30V92), Enterobacter asburiae (strain MRC12), Sinorhizobium meliloti (strain MRC31), Pseudomonas thivervalensis (strain MRC33), Pseudomonas fulva (strain MRC41), and Pseudomonas lini (strain MRR2). Further, at–1.02 MPa all the 10 isolates showed PGP traits, and 3 isolates (FTR, NFTR and MRC12) showed antifungal activity. Thus, indicating that drought tolerant plant growth promoting antagonistic endophytic bacteria (PGPAE) helps in plant growth and disease management under drought stress.     

Estimation of rice protein content before harvest using ground-based hyperspectral imaging and region of interest analysis

Protein content, which represents rice taste quality, must be estimated in order to create a harvesting plan as well as next year’s basal dressing fertilizer application plan. Ground-based hyperspectral imaging with high resolution (1 × 1 mm per pixel) was used for estimating the protein content of brown rice before harvest. This paper compares the estimation accuracy of rice protein content estimation models generated from the mean reflectances of five regions of interest (ROIs): the overall target area, dark area (less illuminated parts of the rice plants), canopy area (leaves, yellow leaves, and ears), leaf area, and ear and yellow leaf area. The size of the target sampling area was 0.85 × 0.85 m. An R + G + B histogram and a GNDVI–NDVI image were used to separate the target area into the individual ROIs. The values of the coefficient of determination R ² and the root mean square error of prediction (RMSE) were similar for each model: R ² ranged from 0.83 to 0.86 and RMSE ranged from 0.27 to 0.30% for all models except for the dark area model, where R ² = 0.76 and RMSE = 0.35%. There were no significant differences in the magnitude of the estimation error among all models. This result indicates that it is not necessary to obtain an image with a ground resolution that is greater than 0.85 × 0.85 m per pixel to estimate rice protein content before harvest. This result should provide useful information when deciding the altitude of platforms for imaging rice fields.     

Formation of the hypersensitivity response due to the expression of <Emphasis Type="Italic">FeSOD1</Emphasis> gene in tomato when it is inoculated with <Emphasis Type="Italic">Phytophthora infestans</Emphasis>

The activity of antioxidant enzymes and ultrastructural changes in tissues inoculated with P. infestans isolate have been studied in the previously developed independent transgenic lines of tomato with FeSOD1 gene and control plants. It is shown that the activity of superoxide dismutase is significantly higher in transgenic plants than that in control plants (nontransgenic plants). Chlorosis and obvious changes in tissue turgor were observed when the control tomato plants were inoculated, which indicates irreversible damages and unimpeded progression of infection. At the same time, the transgenic lines were characterized by the formation of clearly limited zones of damaged cells that rapidly arrested the infection. In addition, the damages differed from those in nontransgenic plants: the cells along the edges of the infection site were smaller and had heavy invaginations of the cell wall. The contacts between the cells were disrupted in this zone, but they were preserved in undisturbed zones of the tissue. Thus, the expression of the FeSOD1 transgene promotes the emergence of the resistance to P. infestans in tomato transgenic plants.     

Study of intracellular ion composition of yeast <Emphasis Type="Italic">Saccharomyces cerevisiae</Emphasis> biomass

The ionic composition of the of the intracellular content of the alcohol yeast Saccharomyces cerevisiae R. 1039 biomass was studied for confirmation of their use perspectiveness as a mediator to enable the management the mineral content of food in the manufacture of food and feed additives. The ionic composition of the obtained extracts were identified using the method of capillary electrophoresis. It is found that the quantitative ion content in the cell extracts depends on the concentration of the nutrient medium. When the yeast S. cerevisiae R. 1039 was cultivated on the medium with the soluble solids concentration of 30%, the intracellular ion content in the extracts was 1.3 times higher than when the yeast was cultivated on 12% wort by increasing the concentration of chlorides, sulfates, formates, potassium ions, and calcium. The yield of the yeast S. cerevisiae R. 1039 biomass increased 1.6 times per unit of volume of the medium with increase of the soluble solids concentrations from 12% to 30%.     

Genetic differentiation of the Novosibirsk population of Primorsky honey bee

Seven microsatellite loci were evaluated to compare the allele pool of Primorsky honeybee population (n = 90), which was introduced into the Novosibirsk region (south-western Siberia), with the populations of Middle Russian (n = 191, A.m. mellifera), Mountain Grey Caucasian (n =113, A.m. caucasica), Carniolan (n = 61, A.m. carnica) and Carpathian (n = 184, A.m. carpatica) races. The degree of genetic differentiation in Novosibirsk population using a variety of criteria (Fst, Rst (AMOVA), Nei genetic distances) was evaluated.     

Antioxidant content and growth at the initial ontogenesis stages of <Emphasis Type="Italic">Passiflora incarnata</Emphasis> plants under the influence of biostimulant Albit

The aim of this study was to determine the accumulation of antioxidants at аn early stage of development of organs of P. incarnata L. plants grown in greenhouses (medicinal aromatic plants were used for comparison), as well as to evaluate the effect of biostimulant Albit. The use of amperometric and biochemical methods made it possible to measure and evaluate the total antioxidant content in aqueous extracts of leaves of aromatic plants with sedative effects compared to aqueous extracts of P. incarnata L. leaves. The latter are characterized by a lower level of antioxidant accumulation. Seed treatment with biostimulant Albit and foliar treatment of aerial parts of the P. incarnata L. plant increased the total antioxidant content and the content of carotenoids, chlorophylls a and b, and the yield of aerial parts of the plant by 10–15%. The findings suggest that the P. incarnata L. plants grown in greenhouses can be used to create antioxidant herbal remedies.