Combining ability, heterotic patterns and genetic diversity of extra-early yellow inbreds under contrasting environments

Information on the combining ability, heterotic patterns and genetic diversity of maize (Zea mays L.) inbreds is crucial for the success of a hybrid program targeting the stress environments of West Africa (WA). Studies were conducted in 2011 at four locations in Nigeria to (i) determine the combining ability of 20 extra-early yellow inbred lines, (ii) classify the inbred lines into heterotic groups, and (iii) determine the genetic diversity among the lines. General combining ability (GCA) effects were greater than specific combining ability (SCA) effects across test environments suggesting that additive gene action was more important than the nonadditive in the set of inbred lines. The lines were classified into four heterotic groups based on SCA effects, and three groups based on heterotic groups’ specific and GCA, the GCA effects of multiple traits of inbred lines and molecular markers. TZEEI 79, TZEEI 67, and TZEEI 81 were the best inbred testers while TZEEI 95 × TZEEI 79 was the best single-cross tester. TZEEI 88 × TZEEI 66 and TZEEI 96 × TZEEI 73 were identified as ideal hybrids for further testing, promotion for adoption and commercialization in WA.     

Assessing the suitability of stress tolerant early-maturing maize (Zea mays) inbred lines for hybrid development using combining ability effects and DArTseq markers

Identification of hybrids for commercialization is crucial for sustainable maize production in sub-Saharan Africa (SSA). One hundred and ninety test crosses, 10 tester × tester crosses + 10 hybrid checks were evaluated across 11 environments, 2017 to 2019. Inheritance of grain yield under Striga infestation, optimal and across environments was influenced by additive genetic action, but there was greater influence of nonadditive gene action under drought stress conditions. Nine, seven and two inbreds had significant and positive general combining ability (GCA) effects for grain yield under Striga-infested, optimal and drought stress environments, respectively, and would contribute high grain yield to their progenies. Heterotic grouping methods based on specific and GCA, GCA effects of multiple traits and DArTseq markers classified the inbreds into five, three and two heterotic groups, respectively, across research conditions. The DArTseq markers method that classified the inbred lines into two major heterotic groups and was one of the most efficient methods should be adopted for practical purposes in maize breeding programmes in SSA. Hybrids TZEI 7 × TZdEI 352, TZEI 1238 × TZEI 7 and TZEI 1252 × TZEI 7 had outstanding grain yield under contrasting environments and should be tested on-farm for commercialization in SSA.     

Identifying heterotic groups and testers for hybrid development in early maturing yellow maize (Zea mays) for sub-Saharan Africa

Identification of heterotic groups and efficient testers, which are important prerequisites for the development of outstanding hybrids, has been a major challenge to its success, especially for early and extra-early germplasm. This study was carried out to (a) identify the most efficient heterotic grouping method for classifying a set of inbred lines and (b) determine the efficiency of testers in classifying inbred lines into heterotic groups. A total of 205 hybrids obtained by crossing 41 inbred lines with five standard testers were evaluated together with five hybrid checks under drought, low soil nitrogen (N), Striga-infested and optimal environments in Nigeria between 2014 and 2016. The heterotic group's specific and general combining ability (HSGCA) method was more effective in classifying the inbred lines into heterotic groups. Testers TZEI 17 and TZEI 23 were the most efficient across environments and could be invaluable for classifying other lines into heterotic groups and assessing combining ability of maize inbreds. In addition, these testers and heterotic groups represent an invaluable resource for development of outstanding hybrids in sub-Saharan Africa (SSA).     

Genetic effect of <Emphasis Type="Italic">Striga</Emphasis> resistance in sorghum genotypes

Striga is an important parasitic weed causing substantial economic losses in cereal and legume crop production in sub-Saharan Africa. Integrated Striga management approaches such as a combined use of Striga resistant varieties and Fusarium oxysporum f.sp. strigae (FOS), a biocontrol agent of Striga, are an option to control the parasite and to boost sorghum productivity. Understanding host gene action influencing Striga resistance, with or without FOS treatment, is key to developing improved sorghum varieties with durable resistance and high yield. The objective of this study was to determine the gene action and inheritance of Striga resistance using genetically diverse populations of sorghum involving FOS treatment. Twelve sorghum parents selected for Striga resistance, FOS compatibility or superior agronomic performances were crossed using a bi-parental mating scheme. The selected male and female parents and their F₁ progenies, backcross derivatives and the F₂ segregants were field evaluated at three locations in Tanzania known for their severe Striga infestations using a lattice experimental design with two replications. The following data were collected and subjected to generation mean analysis (GMA): days-to-50% flowering (DFL), seed yield per plant (SYP) and number of Striga per plant (SN). GMA showed the preponderance of additive genetic action contributing to the total genetic variation in the evaluated sorghum populations. The additive genetic effect for DFL, SYP and SN, with and without FOS treatments, ranged from 72.02 to 86.65% and 41.49 to 95.44%, 75.62 to 91.42% and 71.83 to 91.89%, and 77.35 to 93.56% and 72.86 to 95.84%, in that order. The contribution of non-additive genetic effects was minimal and varied among generations. FOS application reduced DFL and SN and improved SYP in most of the tested sorghum populations. DFL of sorghum populations was reduced by a mean of 8 days under FOS treatment compared to the untreated control in families such as 675 × 654, AS435 × AS426 and 1563 × AS436. FOS treatment improved SYP with a mean of 6.44 g plant^?1 in 3424 × 3993 and 3984 × 672. The numbers of Striga plants were reduced with a mean of 16 plants due to FOS treatment in the crosses of 675 × 654, 1563 × AS436, 4567 × AS424, and 3984 × 672. The study demonstrated that additive genes were predominantly responsible for the inheritance of Striga resistance in sorghum. Pure line cultivar development targeting reduced DFL, SN and high SYP in the selected populations may provide enhanced response to selection for integrated Striga management (ISM) programme.     

Performance of cowpea varieties under <Emphasis Type="Italic">Striga gesnerioides</Emphasis> (Willd.) Vatke infestation using biplot analysis

Striga gesnerioides (Willd) Vatke, is a major destructive parasitic weed of cowpea (Vigna unguiculata (L.) Walp.) which causes substantial yield reduction in West and Central Africa. The presence of different virulent races within the parasite population contributes to significant genotype × environment interaction, and complicates breeding for durable resistance to Striga. A 3-year study was conducted at three locations in the dry savanna agro-ecology of Nigeria, where Striga gesnerioides is endemic. The primary objective of the study was to identify cowpea genotypes with high yield under Striga infestation and yield stability across test environments and to access suitability of the test environment. Data collected on grain yield and yield components were subjected to analysis of variance (ANOVA). Means from ANOVA were subjected to the genotype main effect plus genotype × environment (GGE) biplot analysis to examine the multi-environment trial data and rank genotypes according to the environments. Genotypes, environment, and genotypes × environment interaction mean squares were significant for grain yield and yield components, and number of emerged Striga plants. The environment accounted for 35.01%, whereas the genotype × environment interaction accounted for 9.10% of the variation in grain yield. The GGE biplot identified UAM09 1046-6-1 (V7), and UAM09 1046-6-2 (V8), as ideal genotypes suggesting that these genotypes performed relatively well in all study environments and could be regarded as adapted to a wide range of locations. Tilla was the most repeatable and ideal location for selecting widely adapted genotypes for resistance to S. gesnerioides.     

Estimating gene action,combining ability and heterosis for grain yield and agronomic traits in extra-early maturing yellow maize single-crosses under three agro-ecologies of Ghana

Maize (Zea mays L.) is the most important cereal crop produced in Ghana. However, yield of the crop is generally low, producing just about 1.7 t/ha. The low yield is attributed to continuous use of local/unimproved varieties. Generally, hybrid varieties have proven to out-yield the local/unimproved varieties due to improved vigour. Development of hybrid varieties depend on good understanding of combining ability and inheritance of important quantitative traits such as grain yield (GY). 45 half-diallel crosses generated from 10 extra-early maturing yellow inbred lines were evaluated in 2015 under rain-fed conditions. The objectives were to determine the genetic control, breeding value and estimate heritability for GY and agronomic traits of the inbred lines under contrasting growing environments in Ghana. General combining ability (GCA) and specific combining ability (SCA) were important in the inheritance of GY and agronomic traits of the inbred lines. However, GCA was more important than SCA across environments to suggest that additive gene action was more important than non-additive gene action in the inheritance of GY and agronomic traits in the inbred lines. High broad-sense heritability, for GY and other agronomic traits indicated preponderance of additive gene action in trait expression, thus, selection based on phenotypic expression could be feasible. Inbred lines P1, P4 and P8 were good combiners for high GY. The genotype, P4 × P8, was identified as the ideal and most yielding single-cross hybrid across research environments and should be further tested on-farm before commercialization.     

Genetic analysis of tropical quality protein maize (<Emphasis Type="Italic">Zea mays</Emphasis> L.) germplasm

Maize (Zea mays L.) is an important source of carbohydrates and protein in the diet in sub-Saharan Africa. The objectives of this study were to (i) estimate general (GCA) and specific combining abilities (SCA) of 13 new quality protein maize (QPM) lines in a diallel under stress and non-stress conditions, (ii) compare observed and predicted performance of QPM hybrids, (iii) characterize genetic diversity among the 13 QPM lines using single nucleotide polymorphism (SNP) markers and assess the relationship between genetic distance and hybrid performance, and (iv) assess diversity and population structure in 116 new QPM inbred lines as compared to eight older tropical QPM lines and 15 non-QPM lines. The GCA and SCA effects were significant for most traits under optimal conditions, indicating that both additive and non-additive genetic effects were important for inheritance of the traits. Additive genetic effects appeared to govern inheritance of most traits under optimal conditions and across environments. Non-additive genetic effects were more important for inheritance of grain yield but additive effects controlled most agronomic traits under drought stress conditions. Inbred lines CKL08056, CKL07292, and CKL07001 had desirable GCA effects for grain yield across drought stress and non-stress conditions. Prediction efficiency for grain yield was highest under optimal conditions. The classification of 139 inbred lines with 95 SNPs generated six clusters, four of which contained 10 or fewer lines, and 16 lines of mixed co-ancestry. There was good agreement between Neighbor Joining dendrogram and Structure classification. The QPM lines used in the diallel were nearly uniformly spread throughout the dendrogram. There was no relationship between genetic distance and grain yield in either the optimal or stressed environments in this study. The genetic diversity in mid-altitude maize germplasm is ample, and the addition of the QPM germplasm did not increase it measurably.     

Heterotic affinity and combining ability of exotic maize inbred lines for resistance to aflatoxin accumulation

Aflatoxin accumulation in maize (Zea mays L.) kernels is a serious economic and health problem that reduces grain quality and nutritional values and causes death to livestock and humans. Understanding the genetic parameters and heterotic responses of exotic maize inbred lines can facilitate their use for developing aflatoxin resistant parents of hybrids in Africa. This study was designed to (1) determine the heterotic affinities of aflatoxin resistant exotic lines, (2) identify exotic inbreds with good combining ability, and (3) determine the mode of inheritance of resistance to aflatoxin contamination in these lines. A line?×?tester mating design was used to determine combining ability of 12 yellow and 13 white inbreds and classify them into heterotic groups. The inbreds were crossed to two adapted testers representing two African heterotic groups and the resulting testcrosses along with hybrid checks were evaluated in separate trials at two locations for 2 years in Nigeria. General combining ability (GCA) effects were more important than specific combining ability effects for aflatoxin and grain yield. Among 15 exotic inbred lines having negative GCA effects for aflatoxin and 13 with positive GCA effects for grain yield, six combined the two desired traits. Five white and six yellow endosperm testcrosses were found to be good specific combiners for the two desired traits. The exotic lines with negative GCA effects for aflatoxin accumulation will be used as donor parents to develop backcross populations for generating new inbred lines with much higher levels of resistance to aflatoxin accumulation.     

Inheritance of foliar resistance to <Emphasis Type="Italic">Phytophthora</Emphasis> species in cacao (<Emphasis Type="Italic">Theobroma cacao</Emphasis> L.): can it be influenced by CSSV infection?

Studies on quantitative genetics of foliar resistance to black pod disease in cacao could inadvertently use cocoa swollen shoot virus (CSSV) infected leaves which could bias the results especially in West Africa where the virus is prevalent. However, effects of CSSV on inheritance and heritability of foliar resistance to Phytophthora species is not known. Choice of an efficient breeding method requires an accurate estimation of genetic effects in selection schemes for foliar resistance to Phytophthora species in cacao. The objective of this study was to investigate the effect of CSSV infection on quantitative genetic parameters of foliar resistance to cocoa black pod disease in a population of 36 F1 hybrids developed by mating six cacao genotypes using a diallel method. The generated F1s and their parents were evaluated for foliar resistance to P. palmivora and P. megakarya using a randomized complete block design (RCBD) with three replications. 1A CSSV and Nsaba CSSV strains were used to infect the cacao genotypes using the patch graft method. The parents chosen showed significant variations for scores of leaf discs after inoculation with P. palmivora and P. megakarya. The leaf disc scores of CSSV infected crosses were lower than leaf disc scores of CSSV-free crosses. Genetic component analysis showed that the effects of GCA and SCA was significant for both CSSV-free and CSSV-infected crosses in resistance to P. palmivora and P. megakarya. The significant GCA and SCA for both CSSV-free and CSSV-infected crosses strongly suggest that both additive and non-additive genetic effects play an important role in the determination of inheritance of foliar resistance to Phytophthora species in cacao. There was significant variability in mean squares of GCA and SCA of CSSV-free and CSSV-infected crosses indicating that CSSV infection modifies GCA and SCA of affected plants. Narrow sense heritability was relatively low (0.31) for foliar resistance to P. palmivora and P. megakarya under CSSV-free and 1A CSSV strain infected conditions. However, heritability for foliar resistance to P. palmivora (0.43) and P. megakarya (0.36) was significantly higher under Nsaba CSSV infected condition. The modifications of mean squares of GCA and SCA and narrow sense heritability due to CSSV infection could mislead in choice of breeding methods indicating that attention must be paid to the infection status of plants when conducting quantitative genetics studies using diseased and healthy plants. CSSV status of leaf samples should be known before using them in leaf disc test. Genotypes Pa7/808 and Pound 7 had high negative GCA effects and are promising parents for enhancement of resistance to black pod disease in cacao.     

Genetic analysis of tropical maize inbred lines for resistance to maize lethal necrosis disease

Maize lethal necrosis (MLN) disease is a recent outbreak in eastern Africa and has emerged as a significant threat to maize production in the region. The disease is caused by the co-infection of Maize chlorotic mottle virus and any member of potyviridae family. A total of 28 maize inbred lines with varying levels of tolerance to MLN were crossed in a half-diallel mating design, and the resulting 340 F₁ crosses and four commercial checks were evaluated under MLN artificial inoculation at Naivasha, Kenya in 2015 and 2016 using an alpha lattice design with two replications. The objectives of the study were to (i) investigate the magnitude of general combining ability variance (σ _GCA ² ) and specific combining ability variance (σ _SCA ² ) and their interaction with years; (ii) evaluate the efficiencies of GCA based prediction and hybrid performance by means of a cross-validation procedure; (iii) estimate trait correlations in the hybrids; and (iv) identify the MLN tolerant single cross hybrids to be used as female parents for three-way cross hybrids. Results of the combined analysis of variance revealed that both GCA and SCA effects were significant (P < 0.05) for all traits except for ear rot. For MLN scores at early and late stages, GCA effects were 2.5–3.5 times higher than SCA effects indicating that additive gene action is more important than non-additive gene action. The GCA based prediction efficiency for MLN resistance and grain yield accounted for 67–90% of the variations in the hybrid performance suggesting that GCA-based prediction can be proposed to predict MLN resistance and grain yield prior to field evaluation. Three parents, CKDHL120918, CML550, and CKLTI0227 with significant GCA effects for GY (0.61–1.21; P < 0.05) were the most resistant to MLN. Hybrids “CKLTI0227 × CML550”, “CKDHL120918 × CKLTI0138”, and “CKDHL120918 × CKLTI0136” ranked among the best performing hybrids with grain yield of 6.0–6.6 t/ha compared with mean yield of commercial check hybrids (0.6 t/ha). The MLN tolerant inbred lines and single cross hybrids identified in this study could be used to improve MLN tolerance in both public and private sector maize breeding programs in eastern Africa.     

QTL mapping and analysis of epistatic interactions for grain yield and yield-related traits in <Emphasis Type="Italic">Triticum turgidum</Emphasis> L. var. <Emphasis Type="Italic">durum</Emphasis>

A quantitative trait loci (QTL) analysis of grain yield and yield-related traits was performed on 93 durum wheat recombinant inbred lines derived from the cross UC1113 × Kofa. The mapping population and parental lines were analyzed considering 19 traits assessed in different Argentine environments, namely grain yield, heading date, flowering time, plant height, biomass per plant, and spikelet number per ear, among others. A total of 224 QTL with logarithm of odds ratio (LOD) ≥ 3 and 47 additional QTL with LOD > 2.0 were detected. These QTL were clustered in 35 regions with overlapping QTL, and 12 genomic regions were associated with only one phenotypic trait. The regions with the highest number of multi-trait and stable QTL were 3BS.1, 3BS.2, 2BS.1, 1BL.1, 3AL.1, 1AS, and 4AL.3. The effects of epistatic QTL and QTL × environment interactions were also analyzed. QTL putatively located at major gene loci (Rht, Vrn, Eps, and Ppd) as well as additional major/minor QTL involved in the complex genetic basis of yield-related traits expressed in Argentine environments were identified. Interestingly, the 3AL.1 region was found to increase yield without altering grain quality or crop phenology.     

Combining ability and GGE biplot analyses for resistance to northern leaf blight in tropical and subtropical elite maize inbred lines

The incidence and severity of northern leaf blight (NLB) disease has increased in Southern Africa in the past years with previously resistant cultivars being affected; implying more resistant sources have to be identified and inheritance of NLB resistance investigated. Therefore, 45 F₁ hybrids generated in a half diallel mating of ten elite maize inbred lines were evaluated in six environments for combining ability, genotype × environment interaction and effect of NLB disease on grain yield. General and specific combining ability (GCA and SCA) were highly significant (P < 0.001) for both NLB disease and grain yield. The GCA/SCA ratio was close to unity for both NLB (0.96) and grain yield (0.89), indicating predominance of additive over non-additive gene action for the traits in these inbred lines. Parent P2 and P7 had good GCA for both NLB disease resistance and high grain yield. The NLB disease ratings on the maize hybrids and inbreds ranged from 1.0 to 8.5 (approximately 0–75 % severity). Negative slope coefficients of the linear regression indicated maize yield decrease of 280–610 kg ha^?1 for NLB final disease severity of about 25–75 %, respectively, stressing the need for resistant cultivars to manage the disease. Genotype and (genotype × environment) (GGE) biplots indicated absence of crossover interaction and revealed positive associations among environments, signifying the suitability of all the environments for disease screening. Therefore, the significant additive effects for NLB disease and grain yield entail that breeding progress would be made through selection and a few disease ‘hot-spot’ sites, such as Cedara (South Africa) and Mpongwe (Zambia) can be used for disease screening.     

Heterosis,combining ability and genetic effect,and relationship with genetic distance based on a diallel of hybrids from five diverse <Emphasis Type="Italic">Gossypium barbadense</Emphasis> cotton genotypes

The cultivated tetraploid Gossypium barbadense L. cotton produces superior natural fibers for the textile industry in the world. However, the possibility in utilization of heterosis to further increase its lint yield has not been extensively explored. In this study, two commercial US Pima cotton cultivars and three exotic G. barbadense lines, together with all of their possible hybrids in F₁ and F₂ progeny without reciprocals, were tested for lint yield, yield components, and fiber quality traits in four environments in 2005–2007. With a few exceptions, genotype (G), environment (E), and G × E were all significant or highly significant for all the traits studied. General combining ability (GCA) variances for all the traits in both F₁ and F₂ were also significant, while specific combining ability (SCA) variances were detected only for lint yield, fiber length, and micronaire in both generations and boll weight in F₁. GCA × E was also detected for lint percent, seed index, and fiber length in both F₁ and F₂, and boll weight in F₁, but none of the traits had significant SCA × E. As a group, F₁ and F₂ out-yielded the parent group by 20–40% and 6–10%, respectively. Mid-parent heterosis (MPH) for lint yield in F₁ was generally positive, ranging from ?4.7 to 116.4% with an average of 21.2–48.7%, while lint yield MPH in F₂ ranged from ?23.3 to 69.4% with an average of 6.4–12.4%. However, useful heterosis in lint yield was only detected in the hybrid between the two US commercial cultivars Pima S-7 and DP 340. MPH for other traits was low or not detected. MPH in F₂ was lower than that in F₁ but they were generally positively correlated. The genetic distances (GD) of the parents (based on 467 polymorphic RAPD and AFLP markers) between the five parents was not consistently correlated with MPH and SCA of their hybrids and dominant effects for lint yield and other traits. However, significant and positive correlations between GD of parents and the performance of their hybrids were detected for lint yield, lint percentage, and lint index in both F₁ and F₂ in most of the tests. GD of parents was also correlated with their GCA and additive effects in lint yield, lint percent, lint index, micronaire, plant height, and elongation. The results suggest that the close correlation between GD and hybrid performance per se was mainly due to the existence of GCA and additive effects from parents.     

Marker-assisted breeding to develop the drought-tolerant version of Sabitri,a popular variety from Nepal

Sabitri is a rice variety grown in a large part of the rainfed areas of Nepal. It was originally developed for irrigated condition; hence, this variety suffers high yield decline under drought. Two QTLs, qDTY _3.2 and qDTY _12.1 , with large effects on grain yield under drought were identified in the Sabitri background in separate QTL mapping studies. The present study reports the development of Sabitri near isogenic lines (NILs) with combinations of these two QTLs and their characterization under drought. To do so, marker-assisted backcross breeding (MABB) was combined with phenotypic selection to develop high-yielding drought-tolerant NILs with Sabitri grain type. Apart from this, drought-tolerant variants for grain type with high yield under non-stress were identified among the developed NILs. Early days to flowering of up to 13 days and reduction in plant height of up to 13 cm as compared to Sabitri were observed in the developed NILs. Some of these NILs showed higher yield compared to Sabitri and relatively higher tolerance to drought, indicating the capture of positive alleles and interactions during the course of selection. The developed NILs possessed high yield potential which make them suitable materials for the testing of water-saving technologies in irrigated areas. Based on their performance, these NILs can be deployed in rainfed areas in Nepal and other countries of South Asia to increase yield stability.     

Generation of interspecific hybrids between <Emphasis Type="Italic">Trifolium vesiculosum</Emphasis> and <Emphasis Type="Italic">T. alexandrinum</Emphasis> using embryo rescue

Interspecific hybrids were developed between Trifolium alexandrinum cultivar Wardan × Trifolium vesiculosum and T. alexandrinum cultivar BL1 × T. vesiculosum through embryo rescue, as the crosses failed to set seed under natural conditions. Trifolium vesiculosum was used as a donor/male parent in this study as it is reported to possess tolerance to stem rot and high forage yield. Fertilization in crossed florets of the crosses was manifested from the recovery of swollen ovaries (< 7.80%) and confirmed from the presence of one degenerated ovule in most (> 93.00%) of the swollen ovaries. The hybrid embryos at various developmental stages (heart, torpedo and cotyledonary) were rescued at a frequency of 2.56% from Wardan × T. vesiculosum and 6.12% from BL1 × T. vesiculosum. Differentiation occurred only in the cotyledonary stage embryos, resulting in 17 putative interspecific hybrid plantlets. The assessment of plantlet hybridity through SSR markers (for the alleles inherited from the donor parent), micromorphological leaf traits (leaf texture and stomata) and morphological characters (plant height, leaflet length and width) confirmed production of two interspecific hybrids designated as AV1 and BV3 representing both the crosses. AV1 displayed moderate resistance and BV3 was resistant to stem rot.     

Determining resistance to <Emphasis Type="Italic">Fusarium verticillioides</Emphasis> and fumonisin accumulation in African maize inbred lines resistant to <Emphasis Type="Italic">Aspergillus flavus</Emphasis> and aflatoxins

Fusarium verticillioides and Aspergillus flavus cause Fusarium ear rot (FER) and Aspergillus ear rot (AER) of maize, respectively. Both pathogens are of concern to producers as they reduce grain yield and affect quality. F. verticillioides and A. flavus also contaminate maize grain with the mycotoxins fumonisins and aflatoxins, respectively, which has been associated with mycotoxicosis in humans and animals. The occurrence of common resistance mechanisms to FER and AER has been reported. Hence, ten Kenyan inbred lines resistant to AER and aflatoxin accumulation were evaluated for resistance to FER, F. verticillioides colonisation and fumonisin accumulation; and compared to nine South African lines resistant to FER and fumonisin accumulation. Field trials were conducted at three localities in South Africa and two localities in Kenya. FER severity was determined by visual assessment, while F. verticillioides colonisation and fumonisin content were quantified by real-time PCR and liquid chromatography tandem mass spectrometry, respectively. Significant genotype x environment interactions was determined at each location (P ≤ 0.05). Kenyan inbred CML495 was most resistant to FER and F. verticillioides colonisation, and accumulated the lowest concentration of fumonisins across localities. It was, however, not significantly more resistant than Kenyan lines CML264 and CKL05015, and the South African line RO549 W, which also exhibited low FER severity (≤5%), fungal target DNA (≤0.025 ng μL^?1) and fumonisin levels (≤2.5 mg kg^?1). Inbred lines resistant to AER and aflatoxin accumulation appear to be promising sources of resistance to F. verticillioides and fumonisin contamination.     

Genetic Analysis of Grain Yield and Other Traits of Early‐Maturing Maize Inbreds under Drought and Well‐Watered Conditions

Maize (Zea mays L.) is an important staple food crop in West and Central Africa (WCA). However, its production is constrained by drought. Knowledge and understanding of the genetics of hybrid performance under drought is invaluable in designing breeding strategies for improving maize yield. One hundred and fifty hybrids obtained by crossing 30 inbreds in sets using the North Carolina Design II plus six checks were evaluated under drought and well‐watered conditions for 2 years at three locations in Nigeria. The objectives of the studies were to (i) determine the mode of gene action controlling grain yield and other important agronomic traits of selected early inbred lines, (ii) examine the relationship between per se performance of inbreds and their hybrids and (iii) identify appropriate testers for maize breeding programmes in WCA. General combining ability (GCA) and specific combining ability (SCA) mean squares were significant (P < 0.01) for grain yield and other traits under the research environments. The GCA accounted for 64.5 % and 62.3 % of the total variation for grain yield under drought and well‐watered conditions, indicating that additive gene action largely controlled the inheritance of grain yield of the hybrids. Narrow‐sense heritability was 67 % for grain yield under drought and 49 % under well‐watered conditions. The correlations between traits of early‐maturing parental lines and their hybrids were significant (P < 0.01) under drought, well‐watered and across environments. Mid‐parent and better‐parent heterosis for grain yield were 45.3 % and 18.4 % under drought stress and 111.9 % and 102.6 % under well‐watered conditions. Inbreds TZEI 31, TZEI 17, TZEI 129 and TZEI 157 were identified as the best testers. Drought‐tolerant hybrids with superior performance under stress and non‐stress conditions could be obtained through the accumulation of favourable alleles for drought tolerance in both parental lines.     

Association mapping reveals loci associated with multiple traits that affect grain yield and adaptation in soft winter wheat

Genome-wide association studies (GWAS) are useful to facilitate crop improvement via enhanced knowledge of marker-trait associations (MTA). A GWAS for grain yield (GY), yield components, and agronomic traits was conducted using a diverse panel of 239 soft red winter wheat (Triticum aestivum) genotypes evaluated across two growing seasons and eight site-years. Analysis of variance showed significant environment, genotype, and genotype-by-environment effects for GY and yield components. Narrow sense heritability of GY (h ²  = 0.48) was moderate compared to other traits including plant height (h ²  = 0.81) and kernel weight (h ²  = 0.77). There were 112 significant MTA (p < 0.0005) detected for eight measured traits using compressed mixed linear models and 5715 single nucleotide polymorphism markers. MTA for GY and agronomic traits coincided with previously reported QTL for winter and spring wheat. Highly significant MTA for GY showed an overall negative allelic effect for the minor allele, indicating selection against these alleles by breeders. Markers associated with multiple traits observed on chromosomes 1A, 2D, 3B, and 4B with positive minor effects serve as potential targets for marker assisted breeding to select for improvement of GY and related traits. Following marker validation, these multi-trait loci have the potential to be utilized for MAS to improve GY and adaptation of soft red winter wheat.     

Creating cold resistant strawberry via interploidy hybridization between octoploid and dodecaploid

Strawberry cultivars showed limited cold resistance in the Northeast of China, while we obtained a synthetic dodecaploid strawberry hybrid ‘YH15-10’ (2n = 12x = 84) which showed sufficient cold resistance in this area. The reciprocal crosses between F. × ananassa cv. ‘Allstar’ (2n = 8x = 56) and ‘YH15-10’ (2n = 12x = 84) were carried out to select cold resistant strawberry in this study. The 134 seedlings were obtained from the cross of Allstar × YH15-10, while failed in its reciprocal cross. The 30 randomly selected seedlings were examined in terms of morphological characters, chromosome numbers and cold resistance. Most morphological characters were widely separated among F1 progeny with a high broad-sense heritability, which showed that these variations mainly resulted from genetic effect. Some hybrids exhibited heterosis, especially in growth vigor and runner production. Among the 30 tested hybrids, 28 decaploids (2n = 10x = 70), one octoploid (2n = 8x = 56) and one enneaploid (2n = 9x = 63) were observed. The 63.3% hybrids demonstrated higher cold resistance than that of ‘Allstar’ at P < 0.05. These high polyploidy strawberries have potential values in commercial production and modern cultivar improvement.     

Interspecific hybridization in <Emphasis Type="Italic">Sarcococca</Emphasis> supported by analysis of ploidy level,genome size and genetic relationships

Knowledge of ploidy level differences, genome size and genetic relationships between species facilitates interspecific hybridization in ornamentals. For Sarcococca (Buxaceae) only limited (cyto)genetic information is available. The aim of this study was to determine the genome size and chromosome number and to unravel the genetic relationships of a breeder’s collection using AFLP marker analysis. Based on these results, interspecific crosses were made and the efficiency and hybrid status was verified. Two groups of diploid plants (2n = 2x = 24) were observed, with either a genome size of 4.11–4.20 or 7.25–9.63 pg/2C. All the tetraploid genotypes (2n = 4x = 48) had genome sizes ranging from 7.91 to 8.18 pg/2C. In crosses between parents with equal ploidy level and genome size a higher crossing efficiency (on average 58% of the hybridizations resulting in fruits) and more true hybrids (on average 96% of the offspring) were obtained compared to crosses between plants with different genome size and ploidy level (on average 23% fruits and 24% hybrids, respectively). In none of the cross combinations, the ploidy level or genome size was found to be a complete hybridization barrier, although unilateral incongruity was found in some cross combinations. Distant genetic relationships did not hamper the hybridization within Sarcococca genotypes. Our findings will contribute to a more efficient breeding program and a faster achievement of hybrids with an added value.