Cumulative impacts of habitat fragmentation and the environmental factors affecting upstream migration in the threatened sea lamprey,Petromyzon marinus

1. River ecosystems are often fragmented by artificial structures, such as weirs. For anadromous species, these structures can impede access to upstream spawning sites and ultimately lead to severe population declines.
2. This study focused on the freshwater spawning migration of the sea lamprey, Petromyzon marinus, an anadromous species threatened by habitat fragmentation across its native range. To quantify the cumulative impacts of multiple weirs on upstream-migrating adults, and to explore the environmental factors affecting migratory movements, passive acoustic telemetry was applied to 56 individuals during their spawning migration in the heavily fragmented River Severn basin, UK.
3. While 89% of tagged sea lamprey passed the first weir upstream of the release site on the main river, only 4% passed the fifth weir. For 85% of migrants, the upstream extent of migration was immediately downstream of a weir. Individuals that passed weirs upstream of the release site (n = 50) took 21.6 ± 2.8 days to reach their most upstream location, experiencing cumulative passage times at weirs of 15.7 ± 2.8 days; these delays constituted a median of 84% of total upstream movement times.
4. Multistate models showed that the weir passage rates of sea lamprey in tidal and non-tidal areas increased significantly when downstream river level and discharge were elevated. Upstream-to-downstream changes in direction were frequent downstream of weirs, but rare in unobstructed river sections.
5. The results provided evidence for a cumulative effect of multiple weirs on sea lamprey movements, substantially delaying upstream migrants and limiting their spawning to atypical habitat. The results also demonstrated the crucial roles of high tides and elevated discharge events in enabling weir passage. Although the Severn Estuary features conservation designations for sea lamprey, this study reveals that barriers are inhibiting their upstream migration, a problem that should be addressed to assist sea lamprey conservation.

     

Illumination influences the ability of migrating juvenile salmonids to pass a submerged experimental weir

Abstract –  The downstream migration of juvenile salmonids has previously been considered predominantly passive. It has been argued that passive displacement during periods of darkness is, partially at least, a result of an inability to maintain a fixed position in the absence of visual cues. In this study, behaviour of juvenile Pacific salmonids was assessed under conditions of light and dark as they passed through an artificial channel and encountered a submerged weir. Results indicated that when light, fish formed schools and actively explored the channel. Conversely, when dark (infrared illumination only) they did not form schools, but maintained randomly distributed positions holding station against the flow. As a consequence, more fish approached and either passed, or rejected, the weir when light. The majority of fish that passed the weir did so within the first minute of each trial. Fish predominantly passed through the channel facing downstream and changed orientation prior to passing tail first over the weir crest in the presence and absence of visual cues. The orientation switch was less common when dark. This study shows, at a fine-resolution scale, that downstream movement of juvenile salmonids can be inhibited as fish exhibit alternative behaviours in the absence of visual cues. Downstream movement was not predominantly passive. Fish passage design should not be based on the assumption that downstream migration is passive.     

A test of the cumulative effect of river weirs on downstream migration success,speed and mortality of Atlantic salmon (Salmo salar) smolts: An empirical study

This study investigated the cumulative impact of weirs on the downstream migration of wild Atlantic salmon (Salmo salar) smolts in the River Foyle, Northern Ireland. In spring of 2013 fish were released in two tributaries of similar length; one tributary (impacted) had seven low‐head weirs along the migration pathway and the other was devoid of such structures (un‐impacted). Salmon smolts fitted with acoustic transmitters were monitored via a passive acoustic telemetry array during downstream migration. In 2014 the study was repeated only in the impacted tributary. Overall freshwater survival rates were high (>94%). There was no significant difference in mortality, movement pattern, delay or travel speeds between rivers or between years at any phase of migration. Escapement of salmon smolts through Lough Foyle (a marine sea lough) to the open ocean was low, approximately 18% in each year. Escapement did not differ between impacted and un‐impacted rivers. This study showed no postpassage effects of weirs on mortality, migration speed or escapement of downstream migrating smolts. This suggests that the elevated mortality at low‐head obstacles described in other studies is not inevitable in all river systems. Migration through rivers with natural riffle‐pool migration may result in similar effects as those from low‐head weirs. Causes of apparent high mortality in the early part of marine migration in this study, are unknown; however similar studies have highlighted the impact of fish predators on smolts.     

Spatial patterns in fish biomass and relative trophic level abundance in a wastewater enriched river

Abstract –  It is generally accepted that nutrient enrichment of aquatic systems will lead to increased production at the top trophic level (fish). We found that in the wastewater enriched Bow River, Alberta rainbow trout ( Oncorhynchus mykiss ) biomass increased over 25-fold, and brown trout ( Salmo trutta ) biomass increased 5-fold, however total sportfish biomass did not increase below the nutrient input point source. This was due to a dramatic downstream decrease in mountain whitefish ( Prosopium williamsoni ) biomass to 2% of the average biomass upstream of the municipal effluent source. The spatial pattern over a 177-km river section encompassing the city of Calgary, showed that the increase in trout abundance approximately tracked the expected nutrient concentrations in the river, but with a downstream lag of 20–30 km. Mountain whitefish biomass over the 177 km was inversely related to the dominant trout species, rainbow trout. Invertebrate abundance, macrophyte biomass and phytoplankton biomass all increased below the wastewater treatment plant outfalls. However, periphyton data were highly variable and showed no response. We propose several hypotheses as regards the factors that may have led to the decrease in mountain whitefish, based on the data from all trophic levels and the spatial pattern for fish biomass. Proposed factors influencing the mountain whitefish decline were; altered competitive ability because of macrophyte abundance, ammonia toxicity and barriers to movement (weirs).     

Assessment of residency and movement of the endangered bullhead (Cottus gobio) in two Flemish rivers

Abstract –  Residency and movement of bullheads ( Cottus gobio ) were assessed by mark-recapture from November 2001 to June 2002 in two Flemish rivers [Steenputbeek (SPB), Laarse Beek (LB)]. Although the majority of the recaptured bullheads (SPB: 66%; LB: 55%) was found in their initial tagging site before the spawning season, some fish had covered distances between 10–100 m (mean: 17 ± 2 m) and 10–70 m (mean: 18 ± 7 m), respectively. During the spawning season, the proportion of fish that moved (SPB: 58%; LB: 75%) and the distances travelled (SPB: between 10 and 90 m, mean 26 ± 3 m; LB: between 30 and 260 m, mean 133 ± 3 m) were significantly larger. In addition, analysis of individual movement behaviour of multiple recaptured bullheads showed that some fish were either always resident or mobile, while others switched between both behaviours. In general, our results suggest that not all bullheads exhibit sedentary behaviour but that the populations under study consist of both stationary and mobile individuals.     

Movement of wild and experimentally stocked brown trout, Salmo trutta L., before and after a flood in a small Austrian stream

Weirs and traps were used to monitor the movement of two strains of stocked brown trout, Salmo trutta L. Within 24 h of stocking, 15% ( n  = 13) of a Danish strain and 21% ( n  = 19) of a hybrid strain moved at least 100 m from their release site. In the following 5–6 days, no further movement was found for Danish fish, but hybrid fish continued to move, totaling 32% ( n  = 29) of the fish stocked. During this same period, 36 wild brown trout (≈ 3.5% of the population) were captured, moving over the weirs. Two weeks later, and one week after a flood, 70% ( n  = 59) of the Danish strain were recovered within their release sites and 89% ( n  = 76) were recovered during an electric fishing survey within the 3.5-km-long experimental area. In contrast, 43% ( n  = 31) of the hybrid strain were recaptured in their release sites and 49% ( n  = 45) within the experimental area. The total recapture of wild adult fish was only 16% ( n  = 41). The flooding event was insignificant in comparison with strain-specific behaviours in determining patterns of movement and residency.Austria, brown trout, floods, movement, stocking.     

Regulated floodplains – a trap for unwary fish

Abstract  Loss of river-floodplain (lateral) connectivity has impacted on fish communities and fisheries around the world. However, evidence of the impacts of reduced lateral connectivity on Australian native fish remains scant. To document these impacts, isolated pools located immediately downstream of two major regulators (or weirs) that control flows from the Murray River to an extensive off-stream floodplain, were pumped out five times between 2001 and 2006. A total of 20 980 fish (16 228 native, 4752 non-native) comprising 15 species (five non-native) were collected. Five fish species collected are classified as threatened, while turtles and macroinvertebrates were also present. Regulator operation appeared to affect the number of fish becoming stranded, with the highest number coinciding with longer regulator openings and extended floodplain inundation. Hundreds of floodplain regulators exist on Australian rivers, and all have the potential to impact upon native fish. Trial of several potential management and engineering solutions is recommended to improve river–floodplain connectivity in lowland rivers.     

Survival of migrating sea trout (Salmo trutta) and Atlantic salmon (Salmo salar) smolts negotiating weirs in small Danish rivers

Abstract – The survival of brown trout and Atlantic salmon smolts during passage over small weirs was estimated in two small Danish rivers during the spring of 1998. Parallel groups of smolts were released upstream and downstream of the weirs and recaptured in traps further downstream. The results showed a smolt loss varying from 18 to 71% for trout and 53% for salmon. Furthermore, the surviving smolts from the upstream groups were delayed for up to 9 days compared to downstream groups. The study demonstrated that an increased proportion of total river discharge allocated to fish passage increased the smolt survival. Losses may be because of fish penetrating grids erected at fish farm inlets, predation and delays, which may lead to desmoltification. The low survival may seriously threat both the long-term viability of wild populations of anadromous salmonids and the outcome of the intensive stocking programme in Denmark.     

Movement patterns of seaward migrating European eel (Anguilla anguilla) at a complex of riverine barriers: implications for conservation

River infrastructure such as weirs and hydropower stations commonly present migrating fish with multiple potential passage routes. Knowledge of the cues fish use to navigate such environments is required to protect migrants from hazardous areas and guide them towards safe passage; however, this is currently lacking for many species. Employing high‐resolution positioning telemetry, this study examined movements of downstream migrating adult European eel, Anguilla anguilla, as they encountered a complex of water control structures in one location on the River Stour, southern England. The distribution of eels across five potential routes of passage differed from that predicted based on proportion of discharge alone. Certain routes were consistently avoided, even when the majority of flow passed through them. Passage distribution was partially explained by avoidance in the vicinity of a floating debris boom. Movement paths were nonrandomly distributed across the forebay and eels moved predominantly within a zone 2–4 m from the channel walls. Understanding of avoidance and structure oriented movementation exhibited by eels will help advance effective guidance and downstream passage solutions for adults.     

Lateral movement of common carp (Cyprinus carpio L.) in a large lowland river and floodplain

Abstract –  Common carp ( Cyprinus carpio L.) are a major freshwater invader and knowledge of their movements is important for planning control efforts. To investigate the movement patterns of common carp, radio-tags were implanted into 46 adult fish; 37 near a large floodplain wetland, the Barmah-Millewa forest, and 9 in the Murray River approximately 175 km upstream. Tagged fish were located every second week between August 1999 and March 2001. Common carp occupied total linear ranges (TLR) between 0.4 and 238 km (mean 30 ± 61 km), with 25 fish (62.5%) occupying a TLR < 10 km. Two fish made large distance movements approximately 650 km downstream. Fish sex, the number of locations, time at large, or tagging location explained little variability ( P  > 0.05) in TLR. Monthly distance from release varied from 0.04 to 238 km (mean 15 ± 44 km), and was not significantly related to river discharge and water temperature, but 29 of 31 (93.5%) fish tagged at Barmah moved from the Murray River into adjacent floodplain habitats upon flooding. Five fish (12.5%) moved large distances (>127 km) upstream of the Barmah-Millewa forest. Fourteen fish (35%) showed site fidelity to within 20 m and usually occupied one or two home sites. Twenty-six fish (65%) showed site fidelity to within 100 m occupying up to five sites during the study period. Movement patterns of common carp were complex, and individuals exhibited different strategies, which is typical of invasive species. Efforts to control and potentially reduce common carp populations in regulated river-floodplain environments should target key floodplain access points and over-wintering habitats to reduce adult biomass, spawning and recruitment levels.     

Gauging weirs impede the upstream migration of adult river lamprey Lampetra fluviatilis

Abstract The ability of individual and groups of 30 migrating adult river lamprey Lampetra fluviatilis L. to pass a Crump or flat‐v gauging weir under two discharge regimes (moderate and low) was assessed in an experimental channel. Despite repeated attempts by the lamprey, the Crump weir remained impassable during all trials. Lamprey passage over the flat‐v weir occurred only during group trials at low discharge (5.73 ± 0.19 L s^?1) and only as a single burst swimming event via the deeper water passing over the centre of the weir. Lampreys generally approached the weirs along the channel walls and particularly favoured the true right wall associated with elevated velocities during low discharge and reverse currents at moderate discharge (68.06 ± 2.41 L s^?1). Time spent immediately below the weir was lower than expected compared with further downstream. Rate of weir approach, attempts to pass (absolute number and as a proportion of the total approaches) and time spent immediately downstream of the weir were highest for the Crump weir at low discharge and the flat‐v weir at moderate discharge. The present study suggests that gauging weirs may severely impede the movements of migrating adult river lamprey under low to moderate discharges.     

Fishway entrance modifications enhance fish attraction

Two Denil fishways on the Grand River, Ontario, were monitored annually since 1994 for activity by several dozen fish species. Fishway entrances were enlarged and repositioned approximately 2 m closer to the weir face, in areas where fish were attracted by weir discharge. These simple modifications resulted in increased attraction efficiency for pumpkinseed, Lepomis gibbosus (L.). After modifications, annual relative rate of recapture was 39% (95% confidence interval [CI]=32–46%), representing a 2.6–3-fold increase in fishway use relative to pre-modification conditions. Median daily recapture rates also increased significantly from 0% at both fishways to approximately 2%. These results suggest that fishway entrances should be located as close to a dam or weir face as possible, but velocity barriers from spillway or tailrace discharge must not compromise access.     

Behaviour of juvenile Atlantic salmon, Salmo salar L., in rapid- and slow-flowing sections of a small Norwegian stream

Abstract. Through ultrasonic tagging, fish living in running water and in slow-flowing water in man-made weir basins were tracked over a period of 3–6 days. Results showed that the fish living in the weir basins changed position more frequently and moved over larger areas than fish living in running water. As a consequence of the different behavioural patterns of fish in rapids and in weirbasins, densities of salmon are lower in the weir basins than in the rapids. Therefore, weirs creating large areas of slow-flowing water should not be established in rivers where an optimal production of Atlantic salmon is the goal.     

On the actual recruitment of European eel (Anguilla anguilla) in the River Ems,Germany

Data from the historical River Ems glass eel fisheries in the 20th Century have been used for the ICES recruitment series. Commercial catches ceased from 1980 and dropped to zero; thus, eel recruitment data are since lacking. The present study assessed the actual eel recruitment to the River Ems with regard to the local tidal conditions. Standardised measurements were performed on relative glass eel occurrence at the tidal weir from 2014 and quantitative sampling at the next weir upstream from 2013. Eel migration at the tidal weir was dominated by glass eels and increased 2–3 month earlier than at the upstream weir, where migration was dominated by pigmented eels. In 2016, glass eels were marked at the tidal weir and pigmented elvers were sampled at the upstream weir. The 2016 eel recruitment was estimated at about 1% of the mean historical recruitment. Eel recruitment at the two weirs was not directly linked. Many eels seem not to pass the upstream weir. Further investigations are needed to reveal whether the results represent a regular pattern. In the long run, the perpetuation of the recruitment series is also foreseen.     

Residency and movement of stream-dwelling Japanese charr, Salvelinus leucomaenis, in a central Japanese mountain stream

Abstract – The residency and movement of stream-dwelling adult (2+ and older) Japanese charr, Salvelinus leucomaenis , were studied by mark and recapture experiments in the Jadani Stream, a headwater tributary of the Tedori River, central Japan, from 1986 to 1989. Of the marked fish, 31.3–58.3% were recaptured in the same pools where they had been caught during the study periods of summer (June–August), autumn (August–November) and winter–spring (November to the next June) and no seasonal movement was observed. The mean distances that the fish moved during the study periods ranged from 139.0 to 502.3 m and many movements longer than 1000 m were observed. Between the resident and the moved fish, there was little difference in body length, growth rate or sex. For the fish that had been resident in the same pools and riffles at previous recaptures, most fish were recaptures in the same locations at the next recapture. Conversely, for the fish that moved previously, most fish were recaptured in different locations from previous sites at the next recapture. These results suggest that Japanese charr exhibit relatively high residency throughout the year, but many fish moved longer distance. The results also suggest the presence of static and mobile components in the charr population.     

Swimming height of Atlantic salmon, Salmo salar L., crossing a Crump weir

Abstract. A closed-circuit television system was used to determine the height in the water column at which salmon swam when ascending and descending over a Crump weir. The swimming depth distribution of fish ascending the weir was very skewed with 88.1% of the fish seen swimming within 10cm of the weir surface while the descending fish seen were scattered throughout the available water column. The distribution of water velocities over the downstream face of the weir showed that the velocity was lowest near the weir surface and highest at the water-air interface except at the weir crest where high velocity water was found at the weir surface, often causing fish to rise as they crossed the crest. This has important implications in choosing the position of electrode arrays in open-channel counters as the upstream electrode must not be too close to the weir crest or fish may be missed as a result of being too far from the electrode to produce a large enough signal.     

Preliminary telemetry data on the movement patterns and habitat use of European catfish (Silurus glanis) in a reservoir of the River Ebro, Spain

Abstract –  Knowledge of the movements and diel behaviour of the European catfish ( Silurus glanis ), the largest European freshwater fish, is limited to anecdotal information. In a preliminary telemetry study of European catfish, the spring diel movement patterns of five adult catfish were examined. After intraperitoneal insertion of the acoustic tags, the positions of the fish were recorded automatically in the Flix Reservoir (River Ebro, NE Spain). A marked nocturnal mobility pattern was observed throughout the study. During daytime, the catfish were consistently located in the littoral zone and spent extended periods of the day hidden in concealed habitats. Catfish movements were in a radial pattern, with upstream and downstream excursions followed by returns to a previously occupied location. Significant individual variations in movement pattern were observed among the tagged fish and within the 24 h cycle for each fish. Mean instantaneous swimming speed was 0.17 body lengths per second (BL·s⁻¹) at night but 0.09 BL·s⁻¹ during the daytime.     

Movements of Atlantic salmon migrating upstream through a fish-pass complex in Scotland

Abstract  – Movements of adult Atlantic salmon were tracked through a series of four fish passes and an impoundment on the River Conon system, Northern Scotland. Proportions of fish passing individual obstructions ranged from 63 to 100%. The cumulative effect was that only 4 of the 54 tagged fish reached the spawning areas. The fish were delayed for 1–41 days at a pool-and-overfall ladder and 1–52 days at a Borland fish lift. The fish swam through a 10 km long reservoir at 0.21–1.16 km·h⁻¹. A total of 13 fish negotiated a 2.5 km long, 3 m diameter diversion tunnel through a mountain to their home river. High levels of electromyogram (EMG) activity were recorded during ascent of a pool-and-overfall fish ladder, indicating that high energy demanding burst swimming was required.     

Effect of habitat fragmentation on spawning migration of brown trout (Salmo trutta L.)

Abstract –  Human-induced habitat alteration is one of the main causes of the decline of freshwater fish populations. The watershed of the River Bidasoa (Spain) is an example of heavily fragmented habitat. The local brown trout ( Salmo trutta L.) population is disturbed, with evidence of poor recruitment as well as low adult densities in the main stem. Forty male and female adult migratory trout were tagged with external or internal radio transmitters and released. Fixed stations with data loggers and mobile antennae were used with daily surveys to track fish movements during the migration and spawning period (3 months). Migration distances did not exceed 10 km, and half of the fish never entered a tributary in the study area. Fragmentation because of weirs on the main stem apparently prevented fish from reaching their spawning destination. Fish that entered the tributaries were first confronted with an accessibility problem because of low discharge. However, each fish chose one tributary, without making attempts to run up in other tributaries. Once in the tributary, fish were restrained in their upstream movements by dams. The study area appeared to be isolated from the vast upper part of the watershed. Within the study area, upper parts of tributaries also seemed strongly disconnected from the main stem. This study illustrates the negative impact of river fragmentation on S. trutta migration pattern. Population sustainability can be directly affected through the low availability of spawning grounds for migratory fish. Long-term effects of fragmentation may cause reproductive isolation within watersheds, which in the case of trout also means isolated phenotypic population units.     

Remediation of upstream passage for migrating Galaxias (Family: Galaxiidae) through a pipe culvert

Movement through streams is critical for the maintenance of diadromous fish populations. Numerous fish passage improvement techniques exist, and knowledge of their effectiveness is required to conserve target species. An existing 70‐m pipe culvert was considered a barrier to the passage success of young‐of‐year (YOY) Galaxias spp. as a result of high water velocity (0.9 m/s). Water velocity in the pipe culvert was reduced by installing a concrete weir downstream of the culvert. A lateral ridge rock‐ramp fishway was installed to provide for the passage of fish over the weir, and baffles were installed in the upstream portion of the culvert to provide refuge from higher water velocity at this location. A BACI design was used to determine whether passage success, measured using a mark–recapture technique, improved as a result of the remediation works. The probability of successful passage of YOY Galaxias spp. through the culvert increased from 0.03 to 0.41 following remediation works and was similar to levels observed at a control site (0.33). The success of the fishway and baffles at this culvert provides an important case study for managers to adopt this technique to improve fish passage on a broader scale and range of other sites.