Cover and edge length to area ratio of seagrass (Thalassia testudinum) meadows in coral reef lagoons (Veracruz Reef System,Southwest Gulf of México)

• 1. Habitat loss and habitat fragmentation are usually correlated while habitat degradation may occur independently of them. Natural and anthropogenic disturbances increase the spatial fragmentation of seagrass meadows with unknown consequences on the vegetative development achieved by seagrass.
• 2. Cover and spatial fragmentation of Thalassia testudinum meadows in three coral reef lagoons of the Veracruz Reef System,VRS (SW Gulf of México) were quantified by analysing low‐altitude images acquired by photographic and digital video cameras from a helium‐filled blimp. Spatial fragmentation was quantified as the ratio of the length of meadow edge to meadow area. The number of blowouts (erosive gaps in seagrass meadows) was also recorded.
• 3. Meadow cover was negatively correlated with the length of meadow edge to meadow area ratio. The number of blowouts per ha of T. testudinum meadow was negatively correlated with meadow cover and positively with the length of meadow edge to meadow area ratio. Wave exposure is probably a main component of the processes determining the cover and spatial fragmentation of T. testudinum meadows in VRS.
• 4. Low cover and high spatial fragmentation of T. testudinum meadows in VRS are associated with low vegetative development of this seagrass species. Copyright © 2011 John Wiley & Sons, Ltd.

     

Implications of nutrient enrichment for the conservation and management of seagrass Zostera muelleri meadows

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Linking pipefishes and seahorses to seagrass meadows in the Venice lagoon: Implications for conservation

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A new synthetic index and a protocol for monitoring the status of Posidonia oceanica meadows: a case study at Sanremo (Ligurian Sea,NW Mediterranean)

• 1. The status of a Posidonia oceanica meadow in front of the town of Sanremo, Italy, was studied through a combined use of benthic mapping and synthetic indices.
• 2. Mapping was accomplished by integrating side scan sonar imagery and data collected by scuba diving along transects placed perpendicularly to the coastline. A thematic map (scale 1:5000) was produced. Extent of the meadow, occurrence of dead matte areas, and morphology of the lower limit (with new definition) are all described.
• 3. Two synthetic environmental indices were applied to transect data in order to quantify the status of the meadow: the Conservation Index and the Substitution Index. The former is related to the proportion of dead matte; the latter is a novel index measuring the amount of replacement of the ‘constructional’ seagrass P. oceanica by the ‘non‐constructional’ seagrass Cymodocea nodosa. The potential of a ‘phase shift’ in Ligurian Sea seagrass meadows is discussed.
• 4. The approach here proposed, based on detailed mapping plus synthetic indices, may provide immediate information to evaluate the state of Mediterranean Posidonia oceanica for monitoring and management.

Copyright © 2006 John Wiley & Sons, Ltd.     

A novel method combining species distribution models,remote sensing,and field surveys for detecting and mapping subtidal seagrass meadows

1. Seagrasses such as Zostera marina L. play a key role in coastal ecosystems because of the ecological goods and services that they provide, enhancing biodiversity, productivity and carbon sequestration. Despite their ecological relevance, their distribution is, to date, insufficiently documented and it is estimated that only one‐quarter of their global extent is mapped.
2. This study aims to develop a new method to accurately detect and map subtidal seagrass meadows, using Irish seagrass populations as a case study. This method consists of four steps: (i) the development of a species distribution model (SDM); (ii) the use of satellite‐derived images to visually appraise the potential presence and extent of seagrass beds; (iii) field surveys to validate the presence or absence of the seagrass; and finally (iv) the construction of an up‐to‐date detailed map of the seagrass distribution for the region under investigation.
3. Results indicate that along the Irish coast, and in western regions in particular, the actual distribution of seagrass is considerably greater than is currently reported. Using the proposed method, 16 new regions occupied by seagrass in areas of interest in County Galway (Kilkieran Bay, Bertraghboy Bay, and Chasla Bay) were identified, accounting for a total of 267.92 ha, which increased the previously documented distribution in this area by 44.74%.
4. In this study, we demonstrate the potential of this novel method to efficiently identify and map undocumented subtidal seagrass meadows. As seagrass habitats are under threat globally, the development of new mapping strategies is a critical contribution to current international efforts in seagrass monitoring and management.

     

Don't go breaking apart: Anthropogenic disturbances predict meadow fragmentation of an endangered seagrass

1. Although it is well established that human activities are linked to the loss of seagrasses worldwide, the influence of anthropogenic disturbances on the habitat fragmentation of seagrass meadows is less understood. This information is essential to identify how humans are modifying seascapes and what disturbances pose the greatest risk to seagrasses, which is pertinent given the rapid urbanization occurring in coastal areas.
2. This study examined how the habitat fragmentation of an endangered seagrass Posidonia australis varied in relation to several anthropogenic disturbances (i.e. human population, marine infrastructure, terrestrial run-off and catchment land-usage) within 10 estuaries across 620 km of coastline in New South Wales, Australia.
3. When comparing between estuaries, the fragmentation of P. australis meadows was significantly greater in estuaries adjacent to highly populated metropolitan centres – generally in the Greater Sydney region. At sites within estuaries, the density of boat moorings was the most important predictor of habitat fragmentation, but there was also evidence of higher fragmentation with increased numbers of jetties and oyster aquaculture leases.
4. These results suggest that the fragmentation of seagrass meadows will become more pervasive as the human population continues to grow and estuarine development increases. Strategies to mitigate anthropogenic disturbances on seagrass meadow fragmentation could include prohibiting the construction of boat moorings and other artificial structures in areas where seagrasses are present or promoting environmentally friendly designs for marine infrastructure. This knowledge will support ongoing management actions attempting to balance coastal development and the conservation of seagrasses.

     

Assessing redesigned effectiveness of the water quality monitoring program in the Indian River Lagoon,Florida

• 1. In 1996, the long‐term water quality monitoring network (WQMN) program in the Indian River Lagoon (IRL) of the St. Johns River Water Management District (SJRWMD) that began in 1988 was redesigned to eliminate statistically redundant sampling and satisfy modeling requirements.
• 2. Methods, procedures, and equipment were standardized across multi‐agency monitoring partners to produce reliable and comparable data. The redesigned strategy also included elements to determine previously unknown quantities such as differences in water quality parameters with depth and tidal cycle.
• 3. Reduction of sampling sites from 150 to 24 resulted in a significant improvement of standard deviation (t‐test; α = 0.05) for most water quality parameters analysed. The enhancement in data quality has demonstrated a more cost‐effective and efficient monitoring tool to measure the water quality of the seagrass environment in the IRL.
• 4. Results supported the view of a well‐mixed condition at the sampling stations on most days. Refocusing and streamlining the water quality monitoring program within the context of its mission would enable conversion of data into meaningful information regarding the interrelationship among water quality, photosynthetically active radiation (PAR), and seagrass PAR requirements.

Copyright © 2003 John Wiley & Sons, Ltd.     

Size distribution approaches for monitoring and conservation of coastal Cymodocea habitats

• 1. Cymodocea nodosa's leaf length distribution was studied as an easily measurable indicator to monitor and conserve Macedonian, North Aegean, Greek coastal habitats.
• 2. Three Cymodocea meadows off the eastern Kavala Gulf coast (Nea Karvali, Erateino, Agiasma), with that of Nea Karvali close to an industrial area being the most degraded, were sampled during the seagrass main growing season in July 2004. Two further meadows, one pristine to less degraded (Brasidas, Gulf of Kavala) and one degraded (Biamyl, Inner Thessaloniki Gulf), were sampled as benchmarks in July 2005. The results were evaluated using Gaussian fit curves, and non‐parametric and nested parametric ANOVA on a hierarchy of spatial scales: area (tens of metres), site (hundreds of metres) and meadow (kilometres).
• 3. Frequency (%) distribution of leaf length values and CymoSkew index variation were best associated with anthropogenic stress. Frequency (%) distribution of adult and intermediate photosynthetic leaf length values revealed a unimodal distribution possible to be fitted, at least at pristine to less degraded meadows, by normal distribution (R²>0.5).
• 4. Statistically significant variation was estimated for CymoSkew index, a quantitative expression of leaf length asymmetry, on the meadow scale (P<0.001). Biamyl (3.82) and Nea Karvali (3.64) were indicated as heavily degraded meadows, Erateino (2.93) as a degraded meadow, Agiasma (2.18) as a meadow with the first signs of degradation, and Brasidas (1.68) as a pristine to less degraded meadow. These results in combination with other meadow specific biotic parameters were used to suggest a preliminary angiosperm ‘Ecological Status Classes’ classification scheme useful for the implementation of WFD in the north Aegean Sea.
• 5. The CymoSkew index seems to respond to lower levels of stress than is needed for other more conservative plant modules and therefore, could be regarded as an early warning indicator of Cymodocea habitat degradation. Copyright © 2009 John Wiley & Sons, Ltd.

     

Patterns of wide‐scale substitution within meadows of the seagrass Posidonia oceanica in NW Mediterranean Sea: invaders are stronger than natives

• 1. The endemic seagrass Posidonia oceanica meadows in the Mediterranean Sea are presently facing invasion by alien algal species, especially where they are already showing signs of regression as a result of other stresses. Regressed meadows may be recolonized by native or alien macrophytes that take the place of P. oceanica.
• 2. The pattern and degree of substitution by either native (Cymodocea nodosa and Caulerpa prolifera) or alien (Caulerpa taxifolia and C. racemosa) species in 17 P. oceanica meadows along the coast of Liguria (Italy, NW Mediterranean) were investigated. The invaders were found to be stronger colonizers, in terms of habitat occupancy within meadows, than the natives.
• 3. A set of indices was used to quantify biological invasion within the seagrass ecosystem and to explore the relationship between the meadow's state of health and the replacement by substitutes. The ecological status of the receiving habitat was shown to play a major role in modulating the spread of substitutes.
• 4. Substitutes are thought likely to act simply as passengers of habitat degradation in deep meadows, where previous regression has increased the likelihood of their colonization, but could be the drivers for P. oceanica loss in shallow ones, where they settled even in healthy meadows thus starting the process of regression. Long term monitoring and sustained maintenance of healthy P. oceanica meadows appear to be the most effective management tools to contain the risk of ecological substitution. Copyright © 2010 John Wiley & Sons, Ltd.

     

Occupancy dynamics of rare cyprinids after invasive fish eradication

1. The eradication of invasive species is a management strategy implemented to eliminate adverse impacts of invaders on native species communities. After eradications, follow‐up studies are done to confirm eradication of the invasive species and the short‐term recovery of the native species, but long‐term monitoring to confirm full population recovery and stability is often not completed.
2. In this study, long‐term monitoring of native fishes was carried out over 5 years after the eradication of an invasive fish from the Rondegat River, South Africa. Forty‐six sites distributed along four river sections were sampled for presence/absence using underwater cameras and snorkel surveys. Density data were collected by snorkel surveys.
3. Using multi‐season occupancy models, the annual probability of colonization and local extinction of the native fishes and annual rate of change in occupancy along the river were estimated. Changes in native fish densities across time and across the control and treatment sections were analysed using Kruskal–Wallis analysis, followed by Dunn's post‐hoc test.
4. Probability of colonization and local extinction differed for each native fish species and may have been affected by extrinsic factors, such as rainfall, and intrinsic density‐dependent factors, hypothesized from the density data. The occupancy rates of change revealed that the two Near Threatened fish species have reached an occupancy dynamic equilibrium but the Endangered fish has not, suggesting that other conservation efforts may be needed.
5. Long‐term monitoring of native fishes after an eradication programme has confirmed the successful removal of the invader and the recovery and stability of the community. However, successful eradication was not sufficient for full recovery of all species; additional conservation management strategies are needed to secure the population stability and persistence of endangered fishes. We recommend that eradication programmes, regardless of locality, should employ long‐term monitoring to ensure full recovery of a native fish community.

     

Probabilistic large‐area mapping of seagrass species distributions

• 1. Aerial photograph classification was used to map perennial thick canopy seagrass presence/absence over a large area (85 km²) off the coast of Western Australia. Within those areas mapped as seagrass, a geostatistical nonparametric interpolation method was applied to map the probability of seagrass species presence from underwater tow video. Multiple species mixtures were mapped at fixed probability thresholds of 0.95, 0.75, 0.50, and 0.25. Taxa included Amphibolis spp., Posidonia coriacea, P. sinuosa, P. australis and ephemeral species (Halophila and Zostera tasmanica (newly named as Heterozostera polychlamys)).
• 2. The most commonly occurring species were respectively Amphibolis spp., Posidonia coriacea, P. sinuosa, P. australis, and the ephemeral species. Amphibolis, P. coriacea, and the ephemeral species were mapped predominantly as mixed assemblages (71–89% mixed), whereas P. sinuosa and P. australis were typically mapped as single species.
• 3. Different species growth habits led to distinctive differences in large area distributions. All species were highly variable over short distances (<500 m), and spatial dependence persisted over more than 5 km. However, Posidonia sinuosa meadows were oriented with the longest axis running north–south, and a shorter axis running east–west perpendicular to the coastline (spatial dependence to 2.8 km and 0.8 km, respectively). The ephemeral species were less successfully mapped, largely owing to the potentially different growth patterns of the grouped species, and because their full extent could not be captured by the aerial photograph classification.
• 4. The individual biology of each species results in unique landscape features where Posidonia sinuosa forms larger continuous and predominantly monospecific meadows, whereas the more common Amphibolis and P. coriacea form multi‐species patchy meadows. These mapped features suggest that the emergence of species patterns in seagrass landscapes is influenced by differences in clonal growth among seagrass species.
• 5. Probabilistic species mapping provided information unavailable from discretely classified maps, and facilitates targeted sampling for improving map accuracy, and for more realistically evaluating species and mixed species distribution predictions. The kriging approach, although not well suited for all types of vegetation data, performed well for clonal seagrasses.

Copyright © 2006 John Wiley & Sons, Ltd.     

A low cost field‐survey method for mapping seagrasses and their potential threats: an example from the northern Gulf of Aqaba,Red Sea

1. In the Gulf of Aqaba (GoA), coral reefs are considered the dominating ecosystem, while seagrass meadows, recognized worldwide as important ecosystems, have received little attention. Absence of comprehensive seagrass maps limits awareness, evaluations of associated ecosystem services, and implementation of conservation and management tools. 2. Presented here are the first detailed maps of seagrass meadows along the Israeli coast of the northern GoA. Mapping was performed by snorkelling along transects perpendicular to the shore above meadows growing at 15–25 m. Measurements along these transects included position, meadow depth and visual estimations of seagrass cover. Shallow boundaries of meadows, parallel to shore, were recorded by GPS tracking. Supplementary work included drop‐camera boat surveys to determine the position of the deeper edge of meadows. In addition, GIS layers were created that indicated shoreline infrastructures, near‐shore human activities and potential pollution threats. Ecosystem services of seagrass meadows mapped were valuated using a benefit transfer approach. 3. In total, 9.7 km of the 11 km shoreline were surveyed and 2830 data points collected. Seagrasses were growing along 7.5 km of the shoreline, with shallow (15–25 m) meadows found to cover an area of 707 000 m² and valued at more than US$ 2 000 000 yr^‐1 in associated ecosystem services. Pilot drop‐camera surveys (additional 283 data points) indicated that meadows can extend down to 50 m in some places. Coastal uses and threats varied in character and location. A municipality runoff point and drainage canal located close to the largest meadow were identified as the main threats to local seagrasses. 4. These low‐cost methods enhance our understanding of seagrass distribution in the northern GoA. They demonstrate a GIS‐based tool for assessing how environmental changes might affect the cover and state of seagrasses, improving efforts to conserve seagrass, and have particular relevance to seagrass mapping in developing countries and/or island nations. Copyright © 2016 John Wiley & Sons, Ltd.     

Assessing the impact of population decline on mating system in the overexploited Mediterranean red coral

1. Understanding the interactions among demographic parameters, mating system and population dynamics is key to predict the response of populations to global change. The Mediterranean red coral is a precious octocoral suffering from population decline due to overfishing and warming‐driven mass mortality events.
2. While the demographic consequences of these two pressures are well characterized, little is known regarding their impact on population dynamics and evolution of red coral populations. The main objective of this study was to fill this gap focusing more particularly on mating pattern and genetic drift.
3. Combining sibship and progeny arrays analyses, a genetic characterization of the red coral mating system was conducted. In addition, a synchronic approach was developed comparing mating patterns in two populations with contrasting demographic patterns: a pristine‐like population and a declining population.
4. The results show that polyandry is likely to be the norm in red coral. The similar patterns of genetic diversity between adults and larvae combined with the lack of differential reproductive success among putative fathers did not support significant sweepstakes effects during larval production. While instantaneous biparental inbreeding was detected, no long‐term inbreeding was observed even in the declining population. Mating patterns and effective population sizes in the two populations were not statistically different. Nevertheless, a trend towards a slightly higher inbreeding and a lower number of breeders was observed in the declining population.
5. Accordingly, we hypothesized that an increase in male gamete dispersal may buffer the increase of genetic drift expected in the declining population. This feedback between demographic decline and reproductive pattern may potentially take part in the long‐term persistence of red coral populations. However, the negative trend reported in the declining population unambiguously supports the need to maintain high densities of reproductive colonies to the functioning of red coral populations.

     

Insights into population genetics,connectivity and demographic history of the longnosed skate Dipturus oxyrinchus (Linnaeus, 1758) in the western Mediterranean Sea

1. Genetic information is crucial for the conservation of Dipturus oxyrinchus (Linnaeus, 1758), a threatened large skate with declining populations over most of its geographical range. The main aim of the present study was to investigate the genetic structure, connectivity and demographic history of the longnosed skate in Sardinia (western Mediterranean Sea).
2. Patterns of population structure were assessed in 175 specimens from six sampling sites. Variation in two mitochondrial genes (cytochrome c oxidase subunit I (COI) and control region) highlighted high genetic diversity and low but significant genetic differentiation among sites, which clustered into three groups corresponding to the north‐west, north‐east and south Sardinian coasts.
3. The observed genetic structuring could presumably depend on a combination of past geological events, contemporary restrictions to dispersal and biological characteristics of the species (e.g. site‐fidelity, no pelagic larval stage, limited dispersal of juveniles and/or adults).
4. Demographic analyses showed signs of past population expansion, but substantial current stability of Sardinian populations. From a conservation perspective, these results are encouraging, and indicate that Sardinian populations are still large and stable, and seem not to have suffered negative side‐effects from the ever‐growing fishing pressure in the region.
5. The occurrence of genetic structuring strongly supported the close monitoring of populations to identify any erosion of their gene pool, and high genetic variability of the Sardinian D. oxyrinchus populations could thus represent priority populations for conservation purposes, providing potential sources for recolonization in cases of local extinctions in other areas of the distribution range of the species.
6. When the sequences from Sardinia were compared with those available from other areas, the data seem to exclude the possibility that the Atlantic and Mediterranean host totally isolated populations or even different species, as recently suggested. However, additional markers and a larger sampling sites are needed to confirm these findings.

     

High gene flow in two migratory Neotropical fish species,Salminus franciscanus and Brycon orthotaenia,and implications for conservation aquaculture

1. Two migratory and endangered freshwater fish species, Salminus franciscanus and Brycon orthotaenia, are endemic to one of the most important basins for hydropower capacity in South America. These two fish are target species of conservation aquaculture programmes along the São Francisco River system.
2. In order to implement effective strategies for the conservation of these species, microsatellite markers were developed and used to assess the genetic diversity and structure among wild groups. Fish were collected during the spawning season at four sampling sites, covering more than 1000 km.
3. Polymorphism loci were assessed, and a total of 133 and 107 alleles were found for S. franciscanus and B. orthotaenia, respectively. Despite the critical conservation status, B. orthotaenia showed high levels of genetic diversity, comparable with those of other closely related species.
4. Salminus franciscanus exhibited half of the genetic diversity of its sister species in terms of allelic diversity, indicating that this species will be more prone to genetic drift and inbreeding in conservation aquaculture programmes.
5. The results of an analysis of molecular variance for microsatellite markers in these species (F_ST = 0.007 for S. franciscanus and F_ST = 0.003 for B. orthotaenia) and the estimated recent migration rates (>40% among sampling sites) support panmixia in both species, despite the heterogeneities of the riverscape.
6. The results of this study and the microsatellites developed will play an important role in assisting agencies in making informed decisions on conservation aquaculture programmes.

     

Habitat use patterns of newly settled spotted seatrout in estuaries of the north‐western Gulf of Mexico

Abstract This study examined habitat use patterns of newly settled spotted seatrout Cynoscion nebulosus (Cuvier) across several Gulf of Mexico estuaries. Intensive sampling using an epibenthic sled was conducted in three Texas bays and among three potential habitat types. A long‐term data set (1982 to 1997) from the National Marine Fisheries Service was also used to examine C. nebulosus habitat use patterns in both marsh and seagrass‐dominated bay systems for broad regional comparisons along the north‐western Gulf of Mexico. Vegetated habitat types such as seagrass and marsh supported the highest densities and use was dependent upon availability of particular vegetated habitat types. In laboratory mesocosm experiments, both wild‐caught and hatchery‐reared C. nebulosus, showed strong selection for structured and vegetated habitat types. These field and laboratory results suggest that seagrass meadows and marshes may be functioning as important habitat for C. nebulosus in Gulf of Mexico, and other habitat types such as oyster reef need further evaluation.     

Gene pool and connectivity patterns of Pinna nobilis in the Balearic Islands (Spain,Western Mediterranean Sea): Implications for its conservation through restocking

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The influence of seagrass donor source on small‐scale transplant resilience

1. Concern for conservation of seagrass habitat has prompted international transplantation‐style restoration efforts. A recent review of these restoration efforts has highlighted the low success associated with small‐scale restorations, yet scaling up transplantation effort may be too costly for underfunded regions. Small‐scale transplant survival can be enhanced with alleviation of two underlying issues: restoration site selection and donor site selection.
2. To investigate appropriate donor source selection, donor site environmental influence on seagrass (Halodule wrightii) transplant survival was examined by transplanting donor cores from two environmentally disparate sites to a transplantation site with limited environmental uncertainties. Donor sites were chosen to represent either end of a benthic light gradient (high versus low) to elucidate seagrass resilience to transplantation stress, with respect to donor site conditions.
3. After total loss of the first trial, a second trial was conducted with stabilizing mesh placed over transplants to reduce stingray bioturbation. The second trial resulted in 100% survival of high light transplants after 12 months and moderate survival (30–60%) of low light transplants for the first six months.
4. At 18 months, the second trial ended after sediment burial from a hurricane. One year post‐burial, a patch of H. wrightii recovered at the high light transplant site; after six years the patch expanded to approximately 74 m², an area 37‐fold larger than originally planted.
5. Results from this transplant experiment provide evidence that donor environment plays a role in transplant resilience. The transplants sourced from high light had 47% greater leaf area per shoot, were more resistant to transplantation stress, and recovered following an extreme event relative to low light transplants. Therefore, selection of donor plants with more resilience features, a transplantation site with limited environmental uncertainties, and adaptive intervention can enhance seagrass resilience at a small planting scale.

     

Assessing the impacts of tourism on the world's largest fish Rhincodon typus at Panaon Island,Southern Leyte,Philippines

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