十氯酮污染土壤上根茎作物收割部分的污染状况

A bacterial strain, Arthrobacter oxydans (B4), capable of degrading benzo[a]pyrene (BaP) in water body, was isolated from a polycyclic aromatic hydrocarbons-contaminated site. Effects of different factors, such as reaction time, pH value, temperature and organic nutrients, on BaP biodegradation by the strain B4 were studied. After 5 d treatment, the concentration of BaP in mineral salts medium was reduced to 0.318 mg L-1 , compared to the initial concentration of 1.000 mg L-1 . There was a process of acid formation during the degradation with pH falling from initial 7.01 to 4.61 at 5 d, so keeping the water body under slightly alkaline condition was propitious to BaP degradation. Strain B4 efficiently degraded BaP at 20 to 37 ℃ with addition of organic nutrients. The biodegradation and transformation of BaP mainly occurred on cell surfaces, and extracellular secretions played an important role in these processes. Fourier transform infrared spectroscopy and gas chromatograph-mass spectrometer analyses of metabolites showed that ring cleavage occurred in the BaP degradation process and the resulting metabolically utilizable substrates were generated as sole carbon sources for B4 growth. Furthermore, mineralization extent of metabolites was verified by determining the total organic carbon and inorganic carbon in the degradation system.     

二氯喹啉酸·苄嘧磺隆复合污染降解菌的特性研究

A bacterial strain, designated as LS, was isolated from a contaminated soil and was found to be capable of utilizing quinclorac, bensulfuronmethyl, and a mixture of the two as carbon and energy sources for growth. Strain LS was identified as Ochrobactrum sp. based on its physiological-biochemical properties, 16S rDNA sequences, and phylogenetic analysis. The extent of degradation of quinclorac and bensulfuronmethyl at initial concentrations of 1.5 and 0.1 g L^-1 was 90% and 67%, respectively, as measured by high performance liquid chromatography （HPLC）. When a herbicide mixture of 0.34 g L^-1 quinclorac and 0.02 g L^-1 bensulfuronmethyl was applied as carbon sources, quinclorac and bensulfuronmethyl were degraded at 95.7% and 67.5%, respectively. It appears that quinclorac is utilized more easily in a mixture than in a single state. The optimal temperature for growth of strain LS was 37 ℃. Strain LS grew well at pH 6 to 9 and had the highest degradation level for quinclorac and bensulfuronmethyl at an initial pH of 7 and 8, respectively. Addition of 0.25 g L^-1 yeast extract could promote the growth and extent of degradation of quinclorac and bensulfuronmethyl by strain LS. Strain LS also showed the capability to degrade other aromatic compounds such as catechol, propisochlor, 4-chloro-2-methylphenoxyacetic acid sodium （MCPA-Na） and imazethapy. The isolate LS shows a huge potential to be used in bioremediation for treating complex herbicide residues.     

一株芽孢杆菌属的苄嘧磺隆降解菌的分离鉴定和降解研究

The objectives of this study were to isolate a bensulfuron-methyl (BSM)-degrading strain of Bacillus spp. and to evaluate its effectiveness in remediation of a BSM-contaminated soil. A BSM-degrading bacterium, strain L1, was successfully isolated in this study. Strain L1 was identified as Bacillus megaterium based on its morphological, physiological, and biochemical properties, G+C content, phylogenetic similarity of 16S rDNA, and fatty acid compositions. Two experiments were used to examine BSM degradation by strain L1. When BSM was used as a sole carbon source in a mineral salt medium, the average degradation rate of BSM by strain L1 was 12.8%, which suggested that the strain was able to utilize BSM as a sole carbon and energy source. In addition, supplement of yeast extract (200 mg L-1) significantly (P ≤ 0.01) accelerated the degradation of BSM by strain L1. Almost complete degradation (97.7%) of BSM could be achieved in 84 h with addition of yeast extract. In addition, when a sterile soil was supplemented with BSM (50 mg L-l), BSM degradation rate was 94.3% in 42 d, indicating the potential of using microbes for the remediation of BSM-contaminated soils in fields.     

Acinetobacter sp. LMB-5对邻苯二甲脂的降解及对其中酯酶性质的研究

Phthalate esters(PAEs) are extensively applied in industry, and they migrate to environment during the process of production,employ, and treatment and are difficult to be degraded in nature. However, some microorganisms could use them as the carbon source to growth. In this study, an Acinetobacter sp. strain LMB-5, capable of utilizing PAEs, was isolated from a vegetable greenhouse soil.The degradation capability of strain LMB-5 was also investigated by incubation in mineral salt medium containing different PAEs,dimethyl phthalate(DMP), diethyl phthalate(DEP), di-n-butyl phthalate(DBP), and di-(2-ethylhexyl) phthalate(DEHP). The strain could grow well with DMP, DEP, DBP, and DEHP. When the concentration of DBP increased from 100 to 400 mg L~(-1), the half-life extended from 9.5 to 15.5 h. In the concentration range of DBP, the degradation ability of strain LMB-5 could be described by first-order kinetics. During the biodegradation of DBP, three intermediates, 1,2-benzenedicarboxylic acid,butyl methyl ester, DMP,and phthalic acid(PA) were detected, and the proposed pathway of DBP was identified. By analysis of bioinformatics, one esterase was cloned from the genome of LMB-5 and expressed in Escherichia coli. It displayed an ability to break the ester bonds of DBP. The enzyme exhibited maximal activity at pH 7.0 and 40℃ with DBP as the substrate. It was activated by Cu~(2+) and Fe~(3+) and had a high activity in the presence of low concentrations of methanol or dimethylsulfoxide(each 10%, volume:volume). The Acinetobacter sp. strain LMB-5 may make a contribution to the remediation of soils polluted by PAEs in the future.     

灭多威降解菌mdw-1的分离和降解特性研究

Methomyl, an extremely toxic pesticide, is widely used in agriculture. A strain named mdw-1 capable of degrading methomyl rapidly was successfully isolated from activated sludge in this study. It could utilize methomyl as the sole carbon or nitrogen source. The optimal temperature and medium pH for its growth and methomyl biodegradation were 30-C and 7.0, respectively. It was identified as a Paracoccus sp. according to its morphological features, physiological and biochemical characteristics, and phylogenetic analysis based on the sequence of 16S rDNA. Gas chromatography-mass spectrometry (GC-MS) analysis showed that methomyl could be completely transformed to S-methyl-N-hydroxythioacetamidate in 10 h of incubation with the isolate mdw-1.     

我国几种土壤中铁锰结核的元素组成和地球化学特点

The objective of this research was to isolate a dichlorvos （2,2-dichlorovinyl dimethyl phosphate）-degrading strain of Ochrobactrum sp., and determine its effectiveness in remediation of a dichlorvos-contaminated soil. A dichlorvos-degrading bacterium （strain DDV-1） was successfully isolated and identified as an Ochrobactrum sp. based on its 16S rDNA sequence analysis. Strain DDV-1 was able to utilize dichlorvos as a sole carbon source, and the optimal pH and temperature for its cell growth and degradation were 7.0 and 30 ℃, respectively. Also, the growth and degradation of strain DDV-1 showed the same response to dissolved oxygen. In addition, the soil degradation test indicated that in soil spiked with 100 mg L^-1 or 500 mg L^-1 dichlorvos and inoculated with 0.5% or 1.0% （v/v） strain DDV-1, complete degradation of dichlorvos could be achieved in 24 h. The present study showed that strain DDV-1 was a fast dichlorvos-degrading bacterium in soil. However, further research will be needed to clarify the degradation pathway and the properties of the key enzymes involved in its biodegradation.     

Isolation and Characterization of a Bensulfuron-Methyl-Degrading Strain L1 of Bacillus

The objectives of this study were to isolate a bensulfuron-methyl (BSM)-degrading strain of Bacillus spp. and to eval-uate its effectiveness in remediation of a BSM-contaminated soil. A BSM-degrading bacterium, strain L1, was successfully isolated in this study. Strain L1 was identified as Bacillus megaterium based on its morphological, physiological, and biochemical properties, G+C content, phylogenetic similarity of 16S rDNA, and fatty acid composition. Two experiments were used to examine BSM degradation by strain L1. When BSM was used as a sole carbon source in a mineral salt medium, the average degradation rate of BSM by strain L1 was 12.8%, which suggested that the strain was able to utilize BSM as a sole carbon and energy source. Supplement of yeast extract (200 mg L-1 ) significantly (P ≤ 0.01) accelerated the degradation of BSM by strain L1. Almost complete degradation (97.7%) of BSM could be achieved in 84 h with addition of yeast extract. In addition, in a sterile soil with 50 mg L-1 BSM, BSM degradation rate by strain L1 was 94.3% in 42 d, indicating the potential of using microbes for the remediation of BSM-contaminated soils in fields.     

土壤中多环芳烃的微生物降解: 降解途径及其影响影子

Adverse effects on the environment and high persistence in the microbial degradation and environmental fate of polycyclic aromatic hydrocarbons (PAHs) are motivating interest. Many soil microorganisms can degrade PAHs and use various metabolic pathways to do so. However, both the physio-chemical characteristics of compounds as well as the physical, chemical, and biological properties of soils can drastically influence the degradation capacity of naturally occurring microorganisms for field bioremediation. Modern biological techniques have been widely used to promote the efficiency of microbial PAH-degradation and make the biodegradation metabolic pathways more clear. In this review microbial degradation of PAHs in soil is discussed, with emphasis placed on the main degradation pathways and the environmental factors affecting biodegradation.     

土壤有机复合物降解的动力学模型

A set of equations in suggested to describe the kinetics of degradation of organic ompounds applied to soils ad the kinetics of growth of the inolved microorganisms:-dx/dt=jx kxm dm/dt=-fm gxm where x is the concentration of organic compound at time t,m is the numer of microorganisms capable of degrading the organic compound at time t,while j,k,f and g are positive constants,This model can satisfactorily be used to explain the degradation curve of organic compounds and the growth curve of the involved microorganisms.     

Optimization and modeling of glyphosate biodegradation by a novel Comamonas odontotermitis P2 through response surface methodology

Glyphosate is an important organophosphonate herbicide used to eliminate grasses and herbaceous plants in many vegetation management situations.Its extensive use is causing environmental pollution,and consequently,there is a need to remove it from the environment using an eco-friendly and cost-effective method.As a step to address this problem,a novel bacterial strain Comamonas odontotermitis P2,capable to utilize glyphosate as a carbon(C) and/or phosphorus(P) source,was isolated from a glyphostate-contaminated field soil in Australia and characterized.Response surface methodology(RSM)employing a 23 full factorial central composite design was used to optimize glyphosate degradation by C.odontotermitis P2 under various culture conditions.The strain C.odontotermitis P2 was proficient in degrading 1.5 g L~(-1) glyphosate completely within 104 h.The optimal conditions for the degradation of glyphosate were found to be pH 7.4,29.9℃,and an inoculum density of 0.54 g L~(-1),resulting in a maximum degradation of 90%.Sequencing of glyphosate oxidoreductase(GOX) and C-P lyase(phnJ) genes from C.odontotermitis P2 revealed 99% and 93% identities to already reported bacterial GOX and phnJ genes,respectively.The presence of these two genes in C.odontotermitis indicates its potential to degrade glyphosate through GOX and C-P lyase metabolic pathways.This study demonstrates the potential of C.odontotermitis P2 for efficient degradation of glyphosate,which can be exploited for remediation of glyphosate.     

采用Biolog, DGGE 和PLFA三种方法研究利用方式对土壤微生物群落结构的影响

Biolog, 16S rRNA gene denaturing gradient gel electrophoresis （DGGE）, and phospholipid fatty acid （PLFA） analyses were used to assess soil microbial community characteristics in a chronosequence of tea garden systems （8-, 50-, and 90- year-old tea gardens）, an adjacent wasteland, and a 90-year-old forest. Biolog analysis showed that the average well color development （AWCD） of all carbon sources and the functional diversity based on the Shannon index decreased （P 〈 0.05） in the following order： wasteland 〉 forest 〉 tea garden. For the DCCE analysis, the genetic diversity based on the Shannon index was significantly lower in the tea garden soils than in the wasteland. However, compared to the 90-year-old forest, the tea garden soils showed significantly higher genetic diversity. PLFA analysis showed that the ratio of Gram positive bacteria to Cram negative bacteria was significantly higher in the tea garden soils than in the wasteland, and the highest value was found in the 90-year-old forest. Both the fungal PLFA and the ratio of fungi to bacteria were significantly higher in the three tea garden soils than in the wasteland and forest, indicating that fungal PLFA was significantly affected by land-use change. Based on cluster analysis of the soil microbial community structure, all three analytical methods showed that land-use change had a greater effect on soil microbial community structure than tea garden age.     

土霉素降解菌筛选及降解特性研究

【目的】 近年来,抗生素在畜禽及水产养殖中的使用量增加,导致固体废弃物和污水中存在大量的抗生素和耐药菌。土霉素作为用于养殖业主要的抗生素之一,在畜禽粪便和污水中的残留含量较高,因此,筛选并鉴定了能降解残留土霉素的微生物。 【方法】 采用富集驯化法,以菌肥、药渣和畜禽粪便为原料,采用摇床震荡的方法进行微生物培养,采用高效液相色谱法 (HPLC) 进行土霉素含量测定,筛选出能够高效降解土霉素的微生物。本研究还对降解菌在不同温度、pH、转速和接种量条件下的土霉素降解效果进行优化,并最终利用16S rDNA的方法鉴定菌种。 【结果】 筛选出一株能够高效降解土霉素的菌株T4菌,经16S rDNA测序鉴定该菌株为假单胞菌 (Pseudomonas sp.) ,该菌株在30℃时对土霉素的降解率最高,达到了26.75%;不同pH梯度下,T4菌在pH为7时对土霉素的降解率达到最高,为27.03%;转速为150 rpm和170 rpm时,T4菌对土霉素的降解率分别为26.18%和25.59%,考虑到摇床高转速耗能高的因素,因此选择150 rpm为优化的转速;接种量对T4菌降解土霉素的影响较小,而且二者之间呈负相关,接种量1%时降解率最高,为26.88%。优化条件下,T4菌对100 mg/L土霉素的降解率为26.29%;堆肥试验表明,添加了T4菌之后,土霉素去除率更高,为93.21%。 【结论】 本研究筛选出的菌株T4对土霉素有较好的降解能力。通过16S rDNA基因序列分析,T4菌属于假单胞菌 (Pseudomonas sp.),其降解土霉素的优化条件为温度30℃、pH 7.0、转速150 rpm、接种量1%。在堆肥中接种T4菌后,提高了对土霉素的去除作用,表明T4菌作为土霉素降解菌具有污染治理的潜力。      

猪毛角蛋白降解菌的分离筛选及其降解特性研究

为了筛选能高效降解猪毛角蛋白的微生物,该研究利用猪毛角蛋白为唯一碳氮源的培养基从土壤中分离角蛋白降解菌,并对其菌种分类及降解角蛋白的特性进行了研究。通过驯化共筛选到6株能够降解猪毛角蛋白的菌株,经过7 d发酵培养,菌株X-3对猪毛角蛋白的降解率达77.3%,降解效果最佳。结合菌株形态特征、生理生化特征及16S rDNA发育进化树分析,初步鉴定该菌株为凝结芽孢杆菌(Bacillus coagulans)。菌株X-3是一株广谱的角蛋白降解菌,对猪毛、羊毛、鸡毛、鹅毛、鸭毛的降解率均大于60%。该菌株在角蛋白底物作用下可产生角蛋白酶和二硫键还原酶,且酶活与猪毛角蛋白降解率变化存在显著的正相关性,表明菌株X-3产生的角蛋白酶和二硫键还原酶在角蛋白降解中起到非常关键的作用。在降解过程中,产生了大量的可溶性蛋白,二硫键中的硫也随之转化为硫酸盐、亚硫酸盐和巯基化合物,其中硫酸盐是主要的转化形式。该菌株的分离筛选丰富了猪毛角蛋白降解菌的微生物资源库,在氨基酸饲料生产中具有潜在的应用价值。     

Aerobic biodegradation kinetics and pathway of the novel herbicide ZJ0273 in soils

Degradation of ZJ0273, a recently developed pyrimidynyloxybenzoic‐based herbicide, was investigated in five different soils under aerobic conditions. ZJ0273 degradation rate was strongly affected by soil physico‐chemical characteristics and the inoculation of ZJ0273‐degrading bacteria. Greater organic matter (OM) content, neutral pH and inoculation of ZJ0273‐degrading bacteria can increase degradation rate and decrease the half‐life value (DT50). At 30°C the biodegradation rate of ZJ0273 reached 41–85% in natural (unsterilized) soils. It ranged from 69 to 96% at 90 days after treatment (DAT) in five different types of soils after re‐inoculation of Amycolatopsis sp. M3‐1 and DT50 decreased by 34 , 81, 16, 20 and 32 days, respectively, in soils S1, S2, S3, S4 and S5. Furthermore, using the six metabolites (M1–M6) identified six metabolites (M1–M6) by liquid chromatography‐mass spectrometry (LC‐MS) and their behaviour, a biodegradation pathway of ZJ0273 in soils was proposed. New metabolites, M5 and M6, were found in soils. Biodegradation of ZJ0273 involved continuous biocatalytic reactions, such as de‐estering, hydrolysis, acylation, C‐N cleavage, de‐methyl and ether cleavage reactions. Finally, ZJ0273 was bio‐transformed into M4 and M6, which could be degraded and oxidized into CO₂ and H₂O through the tricarboxylic acid (TCA) cycle.     

阿特拉津降解菌FM326（Arthrobacter sp.）的分离筛选、鉴定和生物学特性

采集除草剂阿特拉津污染的土壤,通过直接涂布法和富集驯化培养分离法,分别获得6株和5株能够降解阿特拉津的细菌。通过降解效率和降解动态试验,筛选到1株高效降解阿特拉津的菌株FM326,该菌株能以阿特拉津为唯一的碳源和氮源生长,培养96h后对1000mg·L-1阿特拉津降解效率达到97%。通过生理生化鉴定和16SrDNA序列分析,菌株FM326鉴定为节杆菌属（Arthrobacter sp.）细菌。该菌株表现出最适生长温度30～35℃,最适生长pH值5～9,好氧生长的生长特性。     

海藻酸钠固定化细菌对毒死蜱的降解特性

毒死蜱的生产和使用日趋广泛,由其造成的环境污染和危害不容忽视。微生物是影响有机磷农药在环境中降解的最主要因素,也被认为是降解有机磷农药最可靠而高效的途径。固定化技术是提高微生物降解农药效率的有效方法之一。本研究以海藻酸钠为载体,采用注射器滴定法将蜡状芽孢杆菌(Bacillus cer-eus)HY-1用海藻酸钠溶胶包埋,研究了反应时间、固定化菌接入量、pH和毒死蜱初始浓度对毒死蜱降解的影响以及固定化菌的重复使用效果。结果表明:海藻酸钠固定化菌能够高效降解基础培养基中的毒死蜱,制备固定化小球海藻酸钠溶胶的最适浓度为2.5%(w/v),小球的平均粒径为3 mm。在培养时间为60 h时,固定化菌对100 mg·L-1毒死蜱的降解率达到最大。固定化小球接入量为160 g·L-1时,对100 mg·L-1毒死蜱的降解率最高。固定化菌对毒死蜱的降解有着较宽泛的pH适应范围,碱性环境更有利于其对毒死蜱的有效降解。当毒死蜱初始浓度为80 mg·L-1和100 mg·L-1时,固定化菌对毒死蜱的降解率较高,达90%左右。固定化菌可重复利用降解毒死蜱,当利用4次后,固定化小球虽已发生崩解,但对100 mg·L-1毒死蜱的降解率仍高达47%。因此,海藻酸钠固定化蜡状芽孢杆菌对水体中毒死蜱的降解率较高,环境适应性较强,固定化菌可在毒死蜱污染的净化去毒方面发挥重要作用。     

联苯菊酯降解菌的筛选、鉴定及降解特性研究

联苯菊酯是一种广谱高效杀虫剂,大规模的应用使其广泛残留在环境中,因此筛选联苯菊酯的高效降解菌具有重要意义。从扬州农药厂附近的地表土壤取样,利用富集驯化培养分离得到一株编号为S8的降解细菌,经表形特征、生理生化特性和16S rDNA序列分析其为醋酸钙不动杆菌（Acinetobacter calcoaceticus）,该菌株在pH7.0和30 ℃的条件下,对100 mg·L-1联苯菊酯的3 d降解率达56.4%,半衰期为60.7 h。其最适生长条件为：pH6.0~8.0,温度30~35 ℃,接种量5%。研究结果可为今后治理联苯菊酯残留污染提供理论参考。     

Atrazine and metolachlor degradation in subsoils

Degradation of atrazine [2-chloro-4-etylamino-6-isopropylamino-1,3,5-triazine] and metolachlor [2-chloro-N-(2-ethyl-6-methylphenyl)-N-(2-methoxy-1-methylethyl)-acetamide] in sterile and non-sterile soil samples collected at two different soil depths (0-20 and 80-110 cm) and incubated under aerobic and anaerobic conditions was studied. Under aerobic conditions, the half-life of atrazine in non-sterile surface soil was 49 days. In non-sterile subsoil, the half-life of atrazine (119 days) was increased by 2.5 times compared in surface soils and was not statistically different from half-lives in sterile soils (115 and 110 days in surface soil and subsoil, respectively). Metolachlor degradation occurred only in non-sterile surface soil, with a half-life of 37 days. Under anaerobic conditions, atrazine degradation was markedly slower than under aerobic conditions, with a half-life of 124 and 407 days in non-sterile surface soil and non-sterile subsoil, respectively. No significant difference was found in atrazine degradation in both sterile surface soil (693 days) and subsoil (770 days). Under anaerobic conditions, degradation of metolachlor was observed only in non-sterile surface soil. Results suggest that atrazine degraded both chemically and biologically, while metolachlor degraded only biologically. In addition, observed Eh values of soil samples incubated under anaerobic conditions suggest a significant involvement of soil microorganisms in the overall degradation process of atrazine under anaerobic conditions.     

Microbial degradation of fomesafen by a newly isolated strain Pseudomonas zeshuii BY-1 and the biochemical degradation pathway

Fomesafen is a diphenyl ether herbicide used to control the growth of broadleaf weeds in bean fields. Although the degradation of fomesafen in soils was thought to occur primarily by microbial activity, little was known about the kinetic and metabolic behaviors of this herbicide. This paper reported the capability of the newly isolated strain Pseudomonas zeshuii BY-1 to use fomesafen as the sole source of carbon in pure culture for its growth. Up to 88.7% of 50 mg of L(-1) fomesafen was degraded by this bacterium in mineral medium within 3 days. Strain BY-1 could also degrade other diphenyl ethers, including lactofen, acifluorfen, and fluoroglycofen. During the fomesafen degradation, five metabolites were detected and identified by liquid chromatography-mass spectrometry and tandem mass spectrometry. The primary degradation pathway of fomesafen might be the reduction of the nitro group to an amino group, followed by the acetylation of the amino derivative, dechlorination, and cleavage of the S-N bond. The addition of the BY-1 stain into soils treated with fomesafen resulted in a higher degradation rate than that observed in uninoculated soils, and the bacteria community in contaminated soil recovered after inoculation of the BY-1 stain. On the basis of these results, strain P. zeshuii BY-1 has the potential to be used in the bioremediation of fomesafen-contaminated soils.