Spatial patterns of soil biological and physical properties in a ridge tilled and a ploughed Luvisol

The present study was conducted to determine the spatial heterogeneity of bulk density, soil moisture, inorganic N, microbial biomass C, and microbial biomass N in the ridge tillage system of Turiel compared to conventional mouldboard ploughing on three sampling dates in May, July, and August. The soil sampling was carried out under vegetation representing the ridge in a high spatial resolution down the soil profile. Bulk density increased with depth and ranged from 1.3 g cm⁻³ at 10 cm depth to 1.6 g cm⁻³ at 35 cm in ploughed plots and from 1.0 g m⁻³ at 5 cm to 1.4 g m⁻³ at 35 cm in the ridges. In the ploughed plots, the contents of microbial biomass C and microbial biomass N remained roughly constant at 215 and 33 μg g⁻¹ soil, respectively, throughout the experimental period. The microbial biomass C/N ratio varied in a small range around 6.4. In the ridged plots, the contents of microbial biomass C and microbial biomass N were 5% and 6% higher compared to the ploughed plots. Highest microbial biomass C contents of roughly 300 μg g⁻¹ soil were always measured in the crowns in July. The lowest contents of microbial biomass C of 85–137 μg g⁻¹ soil were measured in the furrows. The ridges showed strong spatial heterogeneity in bulk density, soil water content, inorganic nitrogen and microbial biomass.     

Impact of land-use types on soil nitrogen net mineralization in the sandstorm and water source area of Beijing,China

Changes of land-use type (LUT) can affect soil nutrient pools and cycling processes that relate long-term sustainability of ecosystem, and can also affect atmospheric CO₂ concentrations and global warming through soil respiration. We conducted a comparative study to determine NH₄⁺ and NO₃⁻ concentrations in soil profiles (0–200 cm) and examined the net nitrogen (N) mineralization and net nitrification in soil surface (0–20 cm) of adjacent naturally regenerated secondary forests (NSF), man-made forests (MMF), grasslands and cropland soils from the windy arid and semi-arid Hebei plateau, the sandstorm and water source area of Beijing, China. Cropland and grassland soils showed significantly higher inorganic N concentrations than forest soils. NO₃⁻-N accounted for 50–90% of inorganic N in cropland and grassland soils, while NH₄⁺-N was the main form of inorganic N in NSF and MMF soils. Average net N-mineralization rates (mg kg⁻¹ d⁻¹) were much higher in native ecosystems (1.51 for NSF soils and 1.24 for grassland soils) than in human disturbed LUT (0.15 for cropland soils and 0.85 for MMF soils). Net ammonification was low in all the LUT while net nitrification was the major process of net N mineralization. For more insight in urea transformation, the increase in NH₄⁺ and, NO₃⁻ concentrations as well as C mineralization after urea addition was analyzed on whole soils. Urea application stimulated the net soil C mineralization and urea transformation pattern was consistent with net soil N mineralization, except that the rate was slightly slower. Land-use conversion from NSF to MMF, or from grassland to cropland decreased soil net N mineralization, but increased net nitrification after 40 years or 70 years, respectively. The observed higher rates of net nitrification suggested that land-use conversions in the Hebei plateau might lead to N losses in the form of nitrate.     

Nitrogen addition and mowing affect microbial nitrogen transformations in a C4 grassland in northern China

Microbial nitrogen (N) transformations play a key role in regulating N cycling in grassland ecosystems. However, there is still little information on how management of semi‐arid grassland such as mowing and/or N fertilizer application affects microbial activity and N transformations. In a field experiment in northern China, N was added at a rate of 10 g N m^?2 year^?1 as NH₄NO₃ to mown and unmown plots (4 × 4 m²) and in situ rates of net ammonification (R_amm), nitrification (R_nit) and mineralization (R_min) were followed at monthly intervals for the vegetation growth periods in the years 2006–2009. In addition, we also measured soil microbial biomass carbon (MBC) and nitrogen (MBN), microbial respiration (MR) and peak above‐ground biomass in August of each measurement year. Driven by the pronounced inter‐annual variability of rainfall, all the properties investigated varied markedly across years. Nevertheless, we were able to demonstrate that over the 4 years N addition significantly stimulated R_nit, R_min and MBN, on average, by 288, 149 and 11.6%, respectively. However, N addition decreased MBC significantly as well as the ratio of MBC:MBN by, on average, 10 and 23%, respectively, whereas an effect of N addition on MR could not be demonstrated. Mowing decreased MBN, MR and qCO₂ significantly by 9, 28 and 24%, respectively, but no effects were found on microbial net N transformation rates and MBC. N addition and mowing interactively affected R_amm and R_min, and MBN, MBC:MBN. In summary, our results indicate a positive effect of N addition but a negative effect of mowing on microbial N transformation in this C4 grassland in northern China.     

Biodiversity and trophic structure of soil nematode communities are altered following woody plant invasion of grassland

Woody plant encroachment is an important land cover change in dryland ecosystems throughout the world, and frequently alters above and belowground primary productivity, hydrology, and soil microbial biomass and activity. However, there is little known regarding the impact of this geographically widespread vegetation change on the biodiversity and trophic structure of soil fauna. Nematodes represent a major component of the soil microfauna whose community composition and trophic structure could be strongly influenced by the changes in ecosystem structure and function that accompany woody encroachment. Our purpose was to characterize nematode community composition and trophic structure along a grassland to woodland chronosequence in the Rio Grande Plains of southern Texas. Research was conducted at the La Copita Research Area where woody encroachment has been documented previously. Soil cores (0–10 cm) were collected in fall 2006 and spring 2007 from remnant grasslands and woody plant stands ranging in age from 15 to 86 years, and nematodes were extracted by sugar centrifugation. Neither nematode densities (3200–13,800 individuals kg⁻¹ soil) nor family richness (15–19 families 100 g⁻¹ soil) were altered by woody encroachment. However, family evenness decreased dramatically in woody stands >30 years old. This change in evenness corresponded to modifications in the trophic structure of nematode communities following grassland to woodland conversion. Although root biomass was 2–5× greater in wooded areas, root-parasitic nematodes decreased from 40% of all nematodes in grasslands to <10% in the older wooded areas, suggesting the quality (C:N or biochemical defenses) of woody plant root tissue could be limiting root-parasites. In contrast, bacterivores increased from 30% of nematodes in grasslands to 70–80% in older woody patches. This large increase in bacterivores may be a response to the 1.5–2.5× increase in soil microbial biomass (bacteria + fungi) following woody encroachment. Therefore, while energy flow through grassland nematode communities appears to be distributed nearly equally among herbivory, fungivory and bacterivory, the energy flow through nematode communities in wooded areas appears to be based primarily on bacterivory. We speculate that these shifts in nematode community composition and trophic structure could have important implications for ecosystem patterns and processes. First, the low abundance of root-parasitic nematodes (and presumably root herbivory) under woody plants may be one mechanism by which woody plants are able to establish and compete effectively with grasses during succession from grassland to woodland. Second, the large increase in bacterivores following woody encroachment likely accelerates microbial turnover and the mineralization of N, thereby providing a feedback that enables the persistence of N-rich woody plant communities.     

Soil microbial biomass and nitrogen transformations among five tree species of the Catskill Mountains, New York, USA

We measured soil microbial biomass nitrogen (MBN), microbial uptake of ¹⁵N, potential net mineralization and net nitrification in the laboratory to determine the influence of tree species on nitrogen (N) transformations in soils of the Catskills Mountains, New York, USA. Organic horizon soils were taken from single species plots of beech (Fagus grandifolia), hemlock (Tsuga canadensis), red oak (Quercus rubra), sugar maple (Acer saccharum) and yellow birch (Betula alleghaniensis). ¹⁵NH₄Cl was added to the soils and N pools were sampled at 1, 3, 10 and 28 days to examine microbial uptake of ¹⁵N over time. Soil MBN was about 60% lower in red oak and sugar maple soils than in the other three species. Soil pools of NO₃⁻ and rates of net nitrification were significantly greater in soils associated with sugar maple than hemlock, red oak and yellow birch. With the exception of sugar maple soils, microbial recovery of ¹⁵N was significantly greater after 10 and 28 days compared to 60 min and 1 day following ¹⁵N tracer addition. Microbial ¹⁵N recovery declined significantly within sugar maple stands within the first 3 days of incubation. Soil carbon to nitrogen ratio (C:N) was lowest in sugar maple soils and highest in red oak soils. However, correlations between soil C:N and MBN or rates of net mineralization and nitrification were not significant. Soil moisture could account for 22% of the variation in MBN and 36% of the variation in net mineralization. Soil microbial transformations of N vary among tree species stands and may have consequences for forest N retention and loss.     

Tillage and cropping sequence impacts on nitrogen cycling in dryland farming in eastern Montana, USA

Information on N cycling in dryland crops and soils as influenced by long-term tillage and cropping sequence is needed to quantify soil N sequestration, mineralization, and N balance to reduce N fertilization rate and N losses through soil processes. The 21-yr effects of the combinations of tillage and cropping sequences was evaluated on dryland crop grain and biomass (stems + leaves) N, soil surface residue N, soil N fractions, and N balance at the 0–20 cm depth in Dooley sandy loam (fine-loamy, mixed, frigid, Typic Argiboroll) in eastern Montana, USA. Treatments were no-tilled continuous spring wheat (Triticum aestivum L.) (NTCW), spring-tilled continuous spring wheat (STCW), fall- and spring-tilled continuous spring wheat (FSTCW), fall- and spring-tilled spring wheat–barley (Hordeum vulgare L.) (1984–1999) followed by spring wheat–pea (Pisum sativum L.) (2000–2004) (FSTW-B/P), and spring-tilled spring wheat–fallow (STW-F). Nitrogen fractions were soil total N (STN), particulate organic N (PON), microbial biomass N (MBN), potential N mineralization (PNM), NH₄-N, and NO₃-N. Annualized crop grain and biomass N varied with treatments and years and mean grain and biomass N from 1984 to 2004 were 14.3–21.2 kg N ha⁻¹ greater in NTCW, STCW, FSTCW, and FSTW-B/P than in STW-F. Soil surface residue N was 9.1–15.2 kg N ha⁻¹ greater in other treatments than in STW-F in 2004. The STN at 0–20 cm was 0.39–0.96 Mg N ha⁻¹, PON 0.10–0.30 Mg N ha⁻¹, and PNM 4.6–9.4 kg N ha⁻¹ greater in other treatments than in STW-F. At 0–5 cm, STN, PON, and MBN were greater in STCW than in FSTW-B/P and STW-F. At 5–20 cm, STN and PON were greater in NTCW and STCW than in STW-F, PNM and MBN were greater in STCW than in NTCW and STW-F, and NO₃-N was greater in FSTW-B/P than in NTCW and FSTCW. Estimated N loss through leaching, volatilization, or denitrification at 0–20 cm depth increased with increasing tillage frequency or greater with fallow than with continuous cropping and ranged from 9 kg N ha⁻¹ yr⁻¹ in NTCW to 46 kg N ha⁻¹ yr⁻¹ in STW-F. Long-term no-till or spring till with continuous cropping increased dryland crop grain and biomass N, soil surface residue N, N storage, and potential N mineralization, and reduced N loss compared with the conventional system, such as STW-F, at the surface 20 cm layer. Greater tillage frequency, followed by pea inclusion in the last 5 out of 21 yr in FSTW-B/P, however, increased N availability at the subsurface layer in 2004.     

Variations in soil microbial biomass and N availability due to residue and tillage management in a dryland rice agroecosystem

Seasonal changes in the levels of soil microbial biomass C (MBC) and N (MBN), N-mineralization rate and available-N concentration were studied in rice–barley supporting tropical dryland (rainfed) agroecosystem under six combinations of tillage (conventional, minimum and zero tillage) and crop residue manipulation (retained or removed) conditions. Highest levels of soil MBC and MBN (368–503 and 38.2–59.7 μg g⁻¹, respectively) were obtained in minimum tillage residue retained (MT+R) treatment and lowest levels (214–264 and 20.3–27.1 μg g⁻¹, respectively) in conventional tillage residue removed (CT−R, control) treatment. Along with residue retention tillage reduction from conventional to zero increased the levels of MBC and MBN (36–82 and 29–104% over control, respectively). The proportion of MBC and MBN in soil organic C and total N contents increased significantly in all treatments compared to control. This increase (28% in case of C and 33% N) was maximum in MT+R and minimum (10% for C and N both) in minimum tillage residue removed (MT−R) treatment. In all treatments concentrations of N in microbial biomass were greater at seedling stage, thereafter these concentrations decreased drastically (21–38%) at grain-forming stage of both crops. In residue removed treatments, N-mineralization rates were maximum during the seedling stage of crops and then decreased through the crop maturity. In residue retained treatments, however, N-mineralization rates were lower than in residue removed treatments at seedling stage of both crops. At grain-forming stage in all instances the N-mineralization rates in residue retained treatments considerably exceeded the rates in corresponding residue removed treatments. Tillage reduction and residue retention both increased the proportion of organic C and total N present in soil organic matter as microbial biomass. Microbial immobilization of available-N during the early phase of crops and its pulsed release later during the period of greater N demand of crops enhanced the degree of synchronization between crop demand and N supply. The maximum enhancement effects were recorded in the minimum tillage along with residue retained treatment. In the dryland agroecosystem studied, two management practices in combination proved more advantageous than either practice alone in maintaining soil fertility levels. For soil fertility amelioration in dryland agroecosystems with least dependence upon chemical fertilizer input, post-harvest retention of about 20 cm shoot biomass (accounting for 25–40% aboveground biomass) of previous crop and its incorporation in soil through minimum tillage in the succeeding crop is suggested, especially in the case of cereal.     

The role of hydropedologic vegetation zones in greenhouse gas emissions for agricultural wetland landscapes

Net greenhouse gas (GHG) source strength for agricultural wetland ecosystems in the Prairie Pothole Region (PPR) is currently unknown. In particular, information is lacking to constrain spatial variability associated with GHG emissions (CH₄, CO₂, and N₂O). GHG fluxes typically vary with edaphic, hydrologic, biologic, and climatic factors. In the PPR, characteristic wetland plant communities integrate hydropedologic factors and may explain some variability associated with trace gas fluxes at ecosystem and landscape scales. We addressed this question for replicate wetland basins located in central North Dakota stratified by hydropedologic vegetation zone on Jul 12 and Aug 3, 2003. Data were collected at the soil-atmosphere interface for six plant zones: deep marsh, shallow marsh, wet meadow, low prairie, pasture, and cropland. Controlling for soil moisture and temperature, CH₄ fluxes varied significantly with zone (p < 0.05). Highest CH₄ emissions were found near the water in the deep marsh (277,800 μg m^− 2 d^− 1 CH₄), which declined with distance from water to − 730 μg m^− 2 d^− 1 CH₄ in the pasture. Carbon dioxide fluxes also varied significantly with zone. Nitrous oxide variability was greater within zones than between zones, with no significant effects of zone, moisture, or temperature. Data were extrapolated for a 205.6 km² landscape using a previously developed synoptic classification for PPR plant communities. For this landscape, we found croplands contributed the greatest proportion to the net GHG source strength on Jul 12 (45,700 kg d^− 1 GHG-C equivalents) while deep marsh zones contributed the greatest proportion on Aug 3 (26,145 kg d^− 1 GHG-C equivalents). This was driven by a 30-fold reduction in cropland N₂O–N emissions between dates. The overall landscape average for each date, weighted by zone, was 462.4 kg km^− 2 d^− 1 GHG-C equivalents on Jul 12 and 314.3 kg km^− 2 d^− 1 GHG-C equivalents on Aug 3. Results suggest GHG fluxes vary with hydropedologic soil zone, particularly for CH₄, and provide initial estimates of net GHG emissions for heterogeneous agricultural wetland landscapes.     

Nitrogen transformations in cold and frozen agricultural soils following organic amendments

Though microbial activity is known to occur in frozen soils, little is known about the fate of animal manure N applied in the fall to agricultural soils located in areas with prolonged winter periods. Our objective was to examine transformations of soil and pig slurry N at low temperatures. Loamy and clay soils were either unamended (Control), amended with ¹⁵NH₄-labeled pig slurry, or amended with the pig slurry and wheat straw. Soils were incubated at −6, −2, 2, 6, and 10 °C. The amounts of NH₄, NO₃ and microbial biomass N (MBN), and the presence of ¹⁵N in these pools were monitored. Total mineral N, NO₃ and ¹⁵NO₃ increased at temperature down to −2 °C in the loam soil and −6 °C in the clay soil, indicating that nitrification and mineralization proceeded in frozen soils. Nitrification and mineralization rates were 1.8-4.9 times higher in the clay than in the loamy soil, especially below freezing point (3.2-4.9), possibly because more unfrozen water remained in the clay than in the loamy soil. Slurry addition increased nitrification rates by 3-14 times at all temperatures, indicating that this process was N-limited even in frozen soils. Straw incorporation caused significant net N immobilization only at temperatures ≥2 °C in both soils; the rates were 1.4-3.4 higher in the loam than in the clay soil. Nevertheless, up to 30% of the applied ¹⁵N was present in MBN at all temperatures. These findings indicate that microbial N immobilization occurred in frozen soils, but was not strong enough to induce net immobilization below the freezing point, even in the presence of straw. The Q₁₀ values for estimated mineralization and nitrification rates were one to two orders-of-magnitude larger below 2 °C than above this temperature (13-208 versus 1.5-6.9, respectively), indicating that these processes are highly sensitive to a small increase in soil temperature around the freezing point of water. This study confirms that net mineralization and nitrification can occur at potentially significant rates in frozen agricultural soils, especially in the presence of organic amendments. In contrast, net N immobilization could be detected essentially above the freezing point. Our results imply that fall-applied N could be at risk of overwinter losses, particularly in fine-textured soils.     

Long‐term changes of aggregate‐associated and labile soil organic carbon and nitrogen after conversion from forest to grassland and cropland in northern Turkey

Soil management systems can have great effect on soil chemical, physical and biological properties. Conversion of forest to grassland and cropland can alter C and N dynamics. The objective of this study was to evaluate the changes in aggregate‐associated and labile soil organic C and N fractions after conversion of a natural forest to grassland and cropland in northern Turkey. This experiment was conducted on plots subject to three different adjacent land uses (forest, grassland and cropland). Soil samples were taken from 0–5, 5–15 and 15–30 cm depths from each land use. Some soil physical (soil texture, bulk density), chemical (soil pH, soil organic matter, lime content, total organic C and N, inorganic N, free and protected organic C) and biological (microbial biomass C and N, mineralizable C and N) properties were measured. The highest and lowest bulk densities were observed in grassland (1.41 g cm⁻³) and cropland (1.14 g cm⁻³), respectively. Microbial biomass C and total organic C in forest were almost twice greater than grassland and four‐times greater than cropland. Cultivation of forest reduced total organic N, mineralizable N and microbial biomass N by half. The great portion of organic C was stored in macroaggregates (>250 µm) in all the three land uses. Free organic C comprised smaller portion of soil organic C in all the three land uses. Thus, this study indicated that long‐term conversion of forest to grassland and cropland significantly decreased microbial biomass C, mineralizable C and physically protected organic C and the decreases were the greatest in cropland. Copyright © 2011 John Wiley & Sons, Ltd.     

The distribution of volatile isoprenoids in the soil horizons around Pinus halepensis trees

We measured the terpene concentration in pentane and water extracts from soil horizons (litter, organic, top and low mineral) and from roots growing in top and low mineral horizons on a distance gradient from Pinus halepensis L. trees growing alone on a grassland. Terpene concentrations in pentane were higher than in water extracts, although β-caryophyllene showed relatively high solubility in water. The litter and roots were important sources of terpenes in soil. Alpha-pinene dominated in roots growing in both “top” (A1) and “low” (B) mineral horizons (123 ± 36 μg g⁻¹ or 14 ± 5 mg m⁻²) and roots in low mineral horizon (270 ± 91 μg g⁻¹ or 7 ± 2 mg m⁻²). Beta-caryophyllene dominated in litter (1469 ± 331 μg g⁻¹ or 2004 ± 481 mg m⁻²). Terpene concentration in soil decreased with increasing distance to the trunk. This is likely to be related to changes in litter and roots type on the distance gradient from pine to grass and herbs. The relative contributions of all compounds, except α-pinene, were similar in the mineral soils and litter. This suggests that litter of P. halepensis is probably the main source of major terpene compounds. However, long-term emissions of α-pinene from P. halepensis roots might also contribute to α-pinene concentrations in rhizosphere soils.     

Soil carbon dioxide flux, carbon sequestration and crop productivity in a tropical dryland agroecosystem: Influence of organic inputs of varying resource quality

In view of the significance of agricultural soils in affecting global C balance, the impact of manipulation of the quality of exogenous inputs on soil CO₂–C flux was studied in rice–barley annual rotation tropical dryland agroecosystem. Chemical fertilizer, Sesbania shoot (high quality resources), wheat straw (low quality resource) and Sesbania + wheat straw (high + low quality), all carrying equivalent recommended dose of N, were added to soil. A distinct seasonal variation in CO₂–C flux was recorded in all treatments, flux being higher during rice period, and much reduced during barley and summer fallow periods. During rice period the mean CO₂–C flux was greater in wheat straw (161% increase over control) and Sesbania + wheat straw (+129%) treatments; however, during barley and summer fallow periods differences among treatments were small. CO₂–C flux was more influenced by seasonal variations in water-filled pore space compared to soil temperature. In contrast, the role of microbial biomass and live crop roots in regulating soil CO₂–C flux was highly limited. Wheat straw input showed smaller microbial biomass with a tendency of rapid turnover rate resulting in highest cumulative CO₂–C flux. The Sesbania input exhibited larger microbial biomass with slower turnover rate, leading to lower cumulative CO₂–C flux. Addition of Sesbania to wheat straw showed higher cumulative CO₂–C flux yet supported highest microbial biomass with lowest turnover rate indicating stabilization of microbial biomass. Although single application of wheat straw or Sesbania showed comparable net change in soil C (18% and 15% relative to control, respectively) and crop productivity (32% and 38%), yet they differed significantly in soil C balance (374 and −3 g C m⁻² y⁻¹ respectively), a response influenced by the recalcitrant and labile nature of the inputs. Combining the two inputs resulted in significant increment in net change in soil C (33% over control) and crop yield (49%) in addition to high C balance (152 g C m⁻² y⁻¹). It is suggested that appropriate mixing of high and low quality inputs may contribute to improved crop productivity and soil fertility in terms of soil C sequestration.     

Substrate type,temperature, and moisture content affect gross and net N mineralization and nitrification rates in agroforestry systems

Accurate prediction of soil N availability requires a sound understanding of the effects of environmental conditions and management practices on the microbial activities involved in N mineralization. We determined the effects of soil temperature and moisture content and substrate type and quality (resulting from long-term pasture management) on soluble organic C content, microbial biomass C and N contents, and the gross and net rates of soil N mineralization and nitrification. Soil samples were collected at 0–10 cm from two radiata pine (Pinus radiata D. Don) silvopastoral treatments (with an understorey pasture of lucerne, Medicago sativa L., or ryegrass, Lolium perenne L.) and bare ground (control) in an agroforestry field experiment and were incubated under three moisture contents (100, 75, 50% field capacity) and three temperatures (5, 25, 40 °C) in the laboratory. The amount of soluble organic C released at 40 °C was 2.6- and 2.7-fold higher than the amounts released at 25 °C and 5 °C, respectively, indicating an enhanced substrate decomposition rate at elevated temperature. Microbial biomass C:N ratios varied from 4.6 to 13.0 and generally increased with decreasing water content. Gross N mineralization rates were significantly higher at 40 °C (12.9 g) than at 25 °C (3.9 g) and 5 °C (1.5 g g^–1 soil day^–1); and net N mineralization rates were also higher at 40 °C than at 25 °C and 5 °C. The former was 7.5-, 34-, and 29-fold higher than the latter at the corresponding temperature treatments. Gross nitrification rates among the temperature treatments were in the order 25 °C >40 °C >5 °C, whilst net nitrification rates were little affected by temperature. Temperature and substrate type appeared to be the most critical factors affecting the gross rates of N mineralization and nitrification, soluble organic C, and microbial biomass C and N contents. Soils from the lucerne and ryegrass plots mostly had significantly higher gross and net mineralization and nitrification rates, soluble organic C, and microbial biomass C and N contents than those from the bare ground, because of the higher soil C and N status in the pasture soils. Strong positive correlations were obtained between gross and net rates of N mineralization, between soluble organic C content and the net and gross N mineralization rates, and between microbial biomass N and C contents.     

Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation

The soils of the Antarctic dry valleys are exposed to extremely dry and cold conditions. Nevertheless, they contain small communities of micro-organisms that contribute to the biogeochemical transformations of the bioelements, albeit at slow rates. We have determined the dehydrogenase, β-glucosidase, acid and alkaline phosphatase and arylsulphatase activities and the rates of respiration (CO₂ production) in laboratory assays of soils collected from a field experiment in an Antarctic dry valley. The objective of the field experiment was to test the responses of the soil microbial community to additions of C and N in simple (glucose and NH₄Cl) and complex forms (glycine and lacustrine detritus from the adjacent lake comprising principally cyanobacterial necromass). The soil samples were taken 3 years after the experimental treatments had been applied. In unamended soil, all enzyme activities and respiration were detected indicating that the enzymatic capacity to mineralize organic C, P and S compounds existed in the soil, despite the very low organic matter content. Relative to the control (unamended soil), respiration was significantly increased by all the experimental additions of C and N except the smallest NH₄Cl addition (1 mg N g⁻¹ soil) and the smallest detritus addition (1.5 mg C g⁻¹ soil and 0.13 mg N g⁻¹ soil). The activities of all enzymes except dehydrogenase were increased by C and combined large C (10 mg C g⁻¹ soil) and N additions, but either unchanged or diminished by addition of either N only or N (up to 10 mg N g⁻¹ soil) with only small C (1 mg C g⁻¹ soil) additions in the form of glucose and NH₄Cl. This suggests that in the presence of a large amount of N, the C supply for enzyme biosynthesis was limited. When normalized with respect to soil respiration, only arylsulphatase per unit of respiration showed a significant increase with C and N additions as glucose and NH₄Cl, consistent with S limitation when C and N limitations have been alleviated. Based on the positive responses of enzyme activity, detritus appeared to provide either conditions or resources which led to a larger biological response than a similar amount of C and more N added in the form of defined compounds (glucose, NH₄Cl or glycine). Assessment of the soil microbial community by ester-linked fatty acid (ELFA) analysis provided no evidence of changes in the community structure as a result of the C and N supplementation treatments. Thus the respiration and enzyme activity responses to supplementation occurred in an apparently structurally stable or unresponsive microbial community.     

Carbon balance of a three crop succession over two cropland sites in South West France

Long term flux measurements of different crop species are necessary to improve our understanding of management and climate effects on carbon flux variability as well as cropland potential in terrestrial carbon sequestration. The main objectives of this study were to analyse the seasonal dynamics of CO₂ fluxes and to establish the effects of climate and cropland management on the annual carbon balance.CO₂ fluxes were measured by means of the eddy correlation (EC) method over two cropland sites, Auradé and Lamasquère, in South West France for a succession of three crops: rapeseed, winter wheat and sunflower at Auradé, and triticale, maize and winter wheat at Lamasquère. The net ecosystem exchange (NEE) was partitioned into gross ecosystem production (GEP) and ecosystem respiration (R_E) and was integrated over the year to compute net ecosystem production (NEP). Different methodologies tested for NEP computation are discussed and a methodology for estimating NEP uncertainty is presented.NEP values ranged between −369 ± 33 g C m⁻² y⁻¹ for winter wheat at Lamasquère in 2007 and 28 ± 18 g C m⁻² y⁻¹ for sunflower at Auradé in 2007. These values were in good agreement with NEP values reported in the literature, except for maize which exhibited a low development compared to the literature. NEP was strongly influenced by the length of the net carbon assimilation period and by interannual climate variability. The warm 2007 winter stimulated early growth of winter wheat, causing large differences in GEP, R_E and NEE dynamics for winter wheat when compared to 2006. Management had a strong impact on CO₂ flux dynamics and on NEP. Ploughing interrupted net assimilation during voluntary re-growth periods, but it had a negligible short term effect when it occurred on bare soil. Re-growth events after harvest appeared to limit carbon loss: at Lamasquère in 2005 re-growth contributed to store up to 50 g C m⁻². Differences in NEE response to climatic variables (VPD, light quality) and vegetation index were addressed and discussed.Net biome production (NBP) was calculated yearly based on NEP and considering carbon input through organic fertilizer and carbon output through harvest. For the three crops, the mean NBP at Auradé indicated a nearly carbon balanced ecosystem, whereas Lamasquère lost about 100 g C m⁻² y⁻¹; therefore, the ecosystem behaved as a carbon source despite the fact that carbon was imported through organic fertilizer. Carbon exportation through harvest was the main cause of this difference between the two sites, and it was explained by the farm production type. Lamasquère is a cattle breeding farm, exporting most of the aboveground biomass for cattle bedding and feeding, whereas Auradé is a cereal production farm, exporting only seeds.     

SOIL MICROBIAL BIOMASS AND NITROGEN MINERALIZATION RATES ALONG AN ALTITUDINAL GRADIENT ON THE COFRE DE PEROTE VOLCANO (MEXICO): THE IMPORTANCE OF LANDSCAPE POSITION AND LAND USE

A study was conducted to examine the responses of microbial activity and nitrogen (N) transformations along an altitudinal gradient. The gradient was divided into three parts. Three areas were sampled: upper part (UP): coniferous forest, corn field, and abandoned corn field; middle part (MP): tropical cloud forest, grassland, and corn field (COL); and lower part (LP): tropical deciduous forest and sugarcane. The results showed that soil microbial biomass carbon (C) and basal respiration were significantly higher in MP and UP than in LP, whereas the microbial quotient (C_mic/C_org) was higher in LP and MP than in UP. The metabolic quotient (qCO₂) was similar among gradient parts evaluated. Net N mineralization, ammonification, and nitrification rates were higher in UP than MP and LP. We found that in UP, the forest conversion to cropland resulted in no significant differences in microbial activity and N transformation rates between land uses. In MP, microbial biomass C, ammonification, and net N mineralization rates decreased significantly with conversion to cropland, but C_mic/C_org and nitrification were higher in COL. Basal respiration and qCO₂ were significantly lower in COL when compared with other land uses. In LP, lower microbial biomass C, C_mic/C_org, and nitrification rates but higher ammonification and net N mineralization rates were observed in tropical deciduous forest than in sugarcane. No significant differences in basal respiration and qCO₂ were found between uses of LP. Clearly, then, soil organic C is not equally accessible to the microbial community along the gradient studied. Copyright © 2012 John Wiley & Sons, Ltd.     

The utility of process-based models for simulating N2O emissions from soils: A case study based on Costa Rican coffee plantations

Soil moisture and gaseous N-flux (N₂O, N₂) dynamics in Costa Rican coffee plantations were successively simulated using a mechanistic model (PASTIS) and two process-based models (NGAS and NOE). Two fertilized (250 kg N ha⁻¹ y⁻¹) coffee plantations were considered, namely a monoculture and a system shaded by the N₂ fixing legume species Inga densiflora. In situ N₂O fluxes were previously measured in these plantations. NGAS and NOE used specific microbial activities for the soils. To parameterize NGAS, we estimated N mineralization via in situ incubations and the contribution of heterotrophic soil respiration to total soil respiration. Potential denitrification rates and the proportion of denitrified N emitted as N₂O were measured in the laboratory to define the values of NOE parameters, as well as nitrification rates and related N₂O production rates for parameterizing both models. Soil moisture and both NGAS and NOE N₂O fluxes were best modelled on an hourly time step. Soil moisture dynamics were satisfactorily simulated by PASTIS. Simulated N₂O fluxes by both NGAS and NOE (3.2 and 2.1 kg N ha⁻¹ y⁻¹ for NGAS; 7.1 and 3.7 kg N ha⁻¹ y⁻¹ for NOE, for the monoculture and shaded plantations respectively) were within a factor of about 2 of the observed annual fluxes (4.3 and 5.8 kg N ha⁻¹ y⁻¹, for the monoculture and shaded plantations respectively). Statistical indicators of association and coincidence between simulated and measured values were satisfactory for both models. Nevertheless, the two models differed greatly in describing the nitrification and denitrification processes. Some of the algorithms in the model NGAS were apparently not applicable to these tropical acidic Andosols. Therefore, more detailed information about microbial processes in different agroecosystems would be needed, notably if process-oriented models were to be used for testing strategies for mitigating N₂O emissions.     

Effects of soil compaction on N-mineralization and microbial-C and -N. I. Field measurements

Soil biological parameters, such as soil respiration or N-mineralization, may be more sensitive to soil compaction than physical parameters. Therefore we studied the effects of soil compaction on net N-mineralization and microbial biomass dynamics in the field. The soils were silty clay loams (Typic Endoaquepts) in either a well-structured permanent pasture with high organic-C content (46 mg g⁻¹) or a site which had been continuously cropped with cereals for 28 years with low organic-C content (21 mg g⁻¹) and a very poor structure. Compaction treatments were applied by five passes of a tractor (total weight 4880 kg, speed 2.2 m s⁻¹). An energy flux of either 2712 J m⁻² (assuming deflecting tyres) or 6056 J m⁻² (assuming rigid tyres) per pass of the rear tyres was estimated. Soil dry bulk densities were initially 1.00 and 1.30 Mg m⁻³ in the pasture and cropped sites, respectively, and increased significantly only in the less dense pasture site. However, soil surface CO₂-fluxes decreased substantially after compaction on both sites (57–69%) because of the highly reduced air permeability of the topsoil. At the cropped site this was also accompanied by a significant decrease in oxygen-diffusion rate (45%). Using the in situ core technique with covered cores the apparent net N-mineralization rate was less in compacted than in non-compacted areas of the pasture ((0.27 and 0.38 μg N g⁻¹ day⁻¹, respectively), but did not differ at the cropped site (average 0.15 μg N g⁻¹ day⁻¹). However, N-mineralization measurements by the in situ core technique were found to be problematic as denitrification possibly occurred and concealed actual net N-mineralization. Microbial biomass did not change significantly as a result of the compaction treatment, but was shown to either decrease or increase over time depending on the methodology used to estimate microbial biomass.     

Rhizosphere soil microbial index of tree species in a coal mining ecosystem

Microbial characterization of the tree rhizosphere provides important information relating to the screening of tree species for re-vegetation of degraded land. Rhizosphere soil samples collected from a few predominant tree species growing in the coal mining ecosystem of Dhanbad, India, were analyzed for soil organic carbon (SOC), mineralizable N, microbial biomass carbon (MBC), active microbial biomass carbon (AMBC), basal soil respiration (BSR), and soil enzyme activities (dehydrogenase, urease, catalase, phenol oxidase, and peroxidase). Among the tree species studied, Aegle marmelos recorded the highest value for MBC (590 mg kg⁻¹), urease (190.5 μg NH₄⁺-N g⁻¹ h⁻¹), catalase (513 μg H₂O₂ g⁻¹ h⁻¹), dehydrogenase (92.3 μg TPF g⁻¹ h⁻¹), phenol oxidase (0.057 μM g⁻¹ h⁻¹) and BSR/AMBC (0.498 mg CO₂-C mg biomass⁻¹ day⁻¹); Tamarindus indica for mineralizable N (69.5 mg kg⁻¹); Morus alba for catalase (513 μg H₂O₂ g⁻¹ h⁻¹) and phenol oxidase (0.058 μM g⁻¹ h⁻¹); Tectona grandis for peroxidase (0.276 μM g⁻¹ h⁻¹), AMBC/MBC (99.4%), and BSR/MBC (0.108 mg CO₂-C mg biomass⁻¹ day⁻¹); Ficus religiosa for AMBC (128.4 mg kg⁻¹) and BSR (12.85 mg CO₂-C kg⁻¹ day⁻¹); Eugenia jambolana for MBC/SOC (8.03%); Butea monosoperma for AMBC/SOC (1.32%) and Azadirachta indica for BSR/AMBC (0.1134 mg CO₂-C mg biomass⁻¹ day⁻¹). Principal component analysis was employed to derive a rhizosphere soil microbial index (RSMI) and accordingly, dehydrogenase, BSR/MBC, MBC/SOC, EC, phenol oxidase and AMBC were found to be the most critical properties. The observed values for the above properties were converted into a unitless score (0–1.00) and the scores were integrated into RSMI. The tree species could be arranged in decreasing order of the RSMI as: A. marmelos (0.718), A. indica (0.715), Bauhinia bauhinia (0.693), B. monosperma (0.611), E. jambolana (0.601), Moringa oleifera (0.565), Dalbergia sissoo (0.498), T. indica (0.488), Morus alba (0.415), F. religiosa (0.291), Eucalyptus sp. (0.232) and T. grandis (0.181). It was concluded that tree species in coal mining areas had diverse effects on their respective rhizosphere microbial processes, which could directly or indirectly determine the survival and performance of the planted tree species in degraded coal mining areas. Tree species with higher RSMI values could be recommended for re-vegetation of degraded coal mining area.     

Sources of spatial and temporal variability of inorganic nitrogen in pure and mixed deciduous temperate forests

We investigated the influence of tree canopy composition and structure on the spatial and temporal variability of (i) concentrations of inorganic N (NH₄⁺ and NO₃⁻) and (ii) net N-mineralization and net nitrification, within the temperate forest floor. We compared a pure European beech stand (PS) with a mixed beech-hornbeam one (MS). Three sampling areas were chosen in each stand. Within the PS, the tree locations represented a decreasing gradient of light intensity reaching the forest floor. Within the MS they represented a gradient in the amount of hornbeam leaves present in the litter. In the field NH₄⁺ and NO₃⁻ concentrations were measured in the upper mineral soil (UMS) and the overlying organic layers (OL and OF+OH). Field exposures using buried bags were carried out on UMS over 1 year to measure in situ net N-mineralization and net nitrification. Potential net N-mineralization and net nitrification were investigated in summer with UMS, OL and OF+OH incubated at 28 °C for 28 days in the laboratory. We hypothesize that with the presence of a mull-forming species (hornbeam) within a stand dominated by a moder-forming one (European beech), (i) the spatial and (ii) temporal patterns of soil inorganic N concentrations, net N-mineralization and net nitrification would be different in the two stands. Our main results show that tree species composition has an influence on both spatial and temporal patterns of nitrification. The PS exhibited its highest peaks of UMS NO₃⁻ concentration and net nitrification in spring and early summer while they were highest in the MS in winter. Furthermore, PS exhibited a higher rate of net nitrification than MS. We discuss this unexpected result and suggest that dissolved organic C may be the controlling factor for net nitrification in the MS.