Microbial biomass and activity in salt affected soils under arid conditions

The effects of salinity on the size, activity and community structure of soil microorganisms in salt affected arid soils were investigated in Shuangta region of west central Anxi County, Gansu Province, China. Eleven soils were selected which had an electrical conductivity (EC) gradient of 0.32–23.05 mS cm⁻¹. There was a significant negative exponential relationship between EC and microbial biomass C, the percentage of soil organic C present as microbial biomass C, microbial biomass N, microbial biomass N to total N ratio, basal soil respiration, fluorescein diacetate (FDA) hydrolysis rate, arginine ammonification rate and potentially mineralizable N. The exponential relationships with EC demonstrate the highly detrimental effect that soil salinity had on the microbial community. In contrast, the metabolic quotient (qCO₂) was positively correlated with EC, and a quadratic relationship between qCO₂ and EC was observed. There was an inverse relationship between qCO₂ and microbial biomass C. These results indicate that higher salinity resulted in a smaller, more stressed microbial community which was less metabolically efficient. The biomass C to biomass N ratio tended to be lower in soils with higher salinity, reflecting the bacterial dominance in microbial biomass in saline soils. Consequently, our data suggest that salinity is a stressful environment for soil microorganisms.     

Response of microbial activity and biomass to increasing salinity depends on the final salinity,not the original salinity

Salinization is a global land degradation issue which inhibits microbial activity and plant growth. The effect of salinity on microbial activity and biomass has been studied extensively, but little is known about the response of microbes from different soils to increasing salinity although soil salinity may fluctuate in the field, for example, depending on the quality of the irrigation water or seasonally. An incubation experiment with five soils (one non-saline, four saline with electrical conductivity (EC_e) ranging from 1 to 50 dS m⁻¹) was conducted in which the EC was increased to 37 EC_e levels (from 3 to 119 dS m⁻¹) by adding NaCl. After amendment with 2% (w/w) pea straw to provide a nutrient source, the soils were incubated at optimal water content for 15 days, microbial respiration was measured continuously and chloroform-labile C was determined every three days. Both cumulative respiration and microbial biomass (indicated by chloroform-labile C) were negatively correlated with EC. Irrespective of the original soil EC, cumulative respiration at a given adjusted EC was similar. Thus, microorganisms from previously saline soils were not more tolerant to a given adjusted EC than those in originally non-saline soil. Microbial biomass in all soils increased from day 0 to day 3, then decreased. The relative increase was greater in soils which had a lower microbial biomass on day 0 (which were more saline). Therefore the relative increase in microbial biomass appears to be a function of the biomass on day 0 rather than the EC. Hence, the results suggest that microbes from originally saline soils are not more tolerant to increases in salinity than those from originally non-saline soils. The strong increase in microbial biomass upon pea straw addition suggests that there is a subset of microbes in all soils that can respond to increased substrate availability even in highly saline environments.     

Carbon dynamics of sodic and saline soils following gypsum and organic material additions: A laboratory incubation

Carbon fluxes in sodic and saline soils were investigated by measuring the soil microbial biomass (SMB) and soil respiration rates under controlled conditions over 12 weeks. Gypsum (10 t/ha) and organic material, as kangaroo grass (10 t/ha), were incorporated in an acidic and an alkaline saline–sodic soils. Cumulative soil respiration rates were lowest in the sodic and saline soils without amendment, while the highest rates were found in those soils that had organic material addition. The addition of gypsum decreased the cumulative respiration rates in the 0–5 cm layer compared to the addition of organic material and the addition of organic material and gypsum. Similarly, the SMB was lowest in the sodic and saline soils without amendment and highest in the soils which had organic material addition, while the effects of gypsum addition were not significant. The low levels of respiration and SMB were attributed to the low soil organic carbon (SOC) levels that result from little or no C input into the soils of these highly degraded landscapes as the high salinity and high sodicity levels have resulted in scarcity or absence of vegetation. Following the addition of organic material to the sodic and saline soils, SMB levels and respiration rates increased despite adverse soil environmental conditions. This suggests that a dormant population of salt-tolerant SMB is present in these soils, which has become adapted to such environmental conditions over time and multiplies rapidly when substrate is available.     

Changing microbial substrate use in Arctic tundra soils through a freeze-thaw cycle

Recent research has established that microbial processes in the arctic continue even when soils are frozen, and that cold-season processes can be important in the overall annual carbon and nitrogen cycles. Despite the importance of wintertime soil microbial processes, our understanding of their controls remains extremely poor. We particularly have a poor understanding of how microbial substrate use patterns change as soils freeze: do microbes use the same substrates as during the growing season, only slower, or do they switch to using different substrates? We used a ¹⁴C isotope equilibration technique to partition respiration between the actively turning over microbial biomass and products pool and the plant detritus pool in a range of Arctic tundra soils. Microbes showed a step-function shift in their metabolism as soils cool from +2 to +0.5 °C, roughly doubling the contribution of recycling of microbial C to total soil respiration. There was no additional shift in substrate use as soils underwent bulk soil freezing. The above-0 °C substrate shift is important because tundra soils spend a long time at or just below 0 °C as they are freezing in the early winter. The change in substrate use represents a shift from processing N-poor detritus to N-rich microbial products, causing N available for either plant uptake or leaching to be greatest when soils are near 0 °C. This may explain the observed patterns of growing season N immobilization vs. cold-season mineralization that appear common in Arctic tundra ecosystems.     

Effect of warming on the temperature dependence of soil respiration rate in arctic,temperate and tropical soils

We examined the response of the temperature coefficient (Q₁₀) for soil respiration rate to changes in environmental temperature through a laboratory incubation experiment. Soil samples were collected from three climatic areas: arctic (Svalbard, Norway), temperate (Tsukuba, Japan) and tropical (Pasoh, Malaysia). The arctic and temperate soils were incubated at 8 °C (control), 12 °C (4 °C warming) and 16 °C (8 °C warming) for 17 days. The tropical soil was incubated at 16 °C (8 °C cooling), 24 °C (control) and 32 °C (8 °C warming). Before and after the incubation experiment, the temperature dependence of soil microbial respiration was measured using an open-airflow method with IRGA by changing the temperature in a water bath. The initial Q₁₀ before the incubation experiment was larger in the soils from higher latitudes: 3.4 in the arctic soil, 2.9 in the temperate soil, and 2.1 in the tropical soil. The response of the microbial respiration rate to change in temperature differed among the three soil types. The temperature dependence of respiration rate in the arctic soil did not change in response to warming by 4 and 8 °C with a Q₁₀ of about 3. On the other hand, the Q₁₀ in the temperate soil decreased with increasing incubation temperature: from 2.8 in soils incubated at 8 °C to 2.5 at 12 °C and 2.0 at 16 °C. In the tropical soil, the Q₁₀ was not changed even by the 8 °C warming with a value of 2.1, whereas the Q₁₀ was increased from 2.1 to 2.7 by the 8 °C cooling. These results suggest that the response of microbial respiration to climatic warming may differ between soils from different latitudes.     

Effects of mercury on soil microbial communities in tropical soils of French Guyana

In gold mining regions, the risk of soil pollution by mercury is a major environmental hazard, especially in tropical areas where soil microflora plays a major part in soil functioning, major bio-geochemical cycles and carbon turn-over. The impact of mercury pollution on soil microflora should thus be carefully assessed in such environments while taking into consideration the specificities of tropical soils. The aim of this study was to compare the effects of mercury (0, 1 and 20 μg of inorganic mercury per gram of soil) on the functional diversity and genetic structure of microbial communities in a tropical soil. We investigated the effects of mercury on tropical soil microflora using soil microcosms spiked with mercury and incubated at 28 °C for 1 month. Microcosm flora, its biomass and its activity, as well as its functional and genetic structure, were followed by cultural methods, measures of respiration, ECOLOG plates, and DGGE (denaturing gel gradient electrophoresis), respectively. Fate of total and bioavailable mercury was estimated by CVAFS (cold vapor atomic fluorescence spectrometry). Results obtained for the microcosms enriched with only 1 μg g^?1 mercury were indistinguishable from controls. Conversely, in the presence of high mercury contents (20 μg g⁽¹), an immediate effect was measured on soil respiration, functional diversity (ECOLOG plates) and genetic structure (DGGE), although no significant effect was observed on plate counts or microbial biomass. In addition, whereas microbial activities (respiration and functional diversity) rapidly regained control values, a lasting effect of the high mercury concentration was observed on the genetic structure of the soil microbial community. These modifications took place during the first week of incubation when total mercury concentration was declining and bioavailable mercury was at its highest.This multiple approach study is one of the first attempts at investigating the effects of mercury on soil microbial communities in tropical soils. Our results demonstrate that in the tropical soil under study, mercury affects the soil microbial communities in a different manner than was previously reported in temperate soils. Furthermore, mercury toxicity on soil microbes may be modulated by typical tropical soil characteristics.     

Production of carbon dioxide and nitrous oxide in alkaline saline soil of Texcoco at different water contents amended with urea: A laboratory study

Soil of the former lake Texcoco is alkaline saline with pH often >10 and electrolytic conductivity (EC) >70 dS m^?1 with rapidly changing water contents. Little is known how fertilizing this area with urea to vegetate the soil would affect emissions of carbon dioxide (CO₂) and dynamics of N. Texcoco soil with electrolytic conductivity (EC) 2.3 dS m^?1 and pH 8.5 (TEXCOCO A soil), EC 2.0 dS m^?1 and pH 9.0 (TEXCOCO B soil) and 200 dS m^?1 and pH 11.2 (TEXCOCO C soil) was amended with or without urea and incubated at 40% of water holding capacity (WHC), 60% WHC, 80% WHC and 100% WHC, while emissions of nitrous oxide (N₂O) and CO₂ and dynamics of ammonium (NH₄⁺), nitrite (NO₂^?) and nitrate (NO₃^?) were monitored for 7 days. An agricultural soil served as control (ACOLMAN soil). The emission of CO₂ increased in the urea amended soil 1.5 times compared to the unamended soil, it was inhibited in TEXCOCO C soil and was >1.2 larger in soil incubated at 40%, 60% and 80% WHC compared to soil incubated at 100% WHC. The emission of N₂O increased in soil added with urea compared to the unamended soil, was similar in TEXCOCO A and B soils, but was <0.2 mg N kg^?1 soil day^?1 in TEXCOCO C soil and generally larger in soil incubated at 60% and 80% WHC compared to soil incubated at 40% and 100% WHC. The water content of the soil had no significant effect on the mean concentration of NH₄⁺, but addition of urea increased it in all soils. The concentration of NO₂^? was not affected by the water content and the addition of urea except in TEXCOCO A soil where it increased to values ranging between 20 and 40 mg N kg^?1. The concentration of NO₃^? increased in the ACOLMAN, TEXCOCO A and TEXCOCO B soil amended with urea compared to the unamended soil, but not in the TEXCOCO C soil. It decreased with increased water content, but not in TEXCOCO C soil. It was found that the differences in soil characteristics, i.e. soil organic matter content, pH and EC between the soils had a profound effect on soil processes, but even small changes affected the dynamics of C and N in soil amended with urea.     

Response of microbial characteristics to heavy metal pollution of mining soils in central Tibet,China

Soil microbial activity plays a crucial role in soil microbiological processes, which can be used as a useful indicator to determine the ecological effects of heavy metal pollution on soils. The objective was to determine the effects of heavy metal pollution on mining soils at the Lawu mine of central Tibet, China on soil enzyme activities (sucrase, urease and acid phosphatase), microbial biomass C, N and P (MBC, MBN, and MBP), basal respiration, metabolic quotients, and N mineralization. Sixteen soil samples around the mine were sampled, and one soil sample, 2 km from the mine center, was taken as the control. Compared to the control, mining soils were polluted by heavy metals, Cu, Zn, Pb and Cd, resulting in decreases of sucrase activities, urease activities, acid phosphatase activities, MBC, MBN, MBP, and N mineralization, and increases of basal respiration and qCO₂. Multivariate analysis (cluster analysis [CA], principle component analysis [PCA] and canonical correlation analysis [CCA]) indicated nine microbial variables were only reduced to one principal component explaining 72% of the original variances, and MBC (R² = 0.93) had the highest positive loadings on the principal component. Mining soils polluted by heavy metals were perfectly clustered into four groups, which were highly distinguished by MBC. There were significant canonical correlations between soil heavy metals and microbial indexes on two canonical variates (R1 = 0.99, p < 0.001; R2 = 0.97, p < 0.01), which further demonstrated significant correlations between soil heavy metal contents and microbial characteristics. Hence, our results suggested that MBC may be used a sensitive indicator for assessing changes in soil environmental quality in metal mine of central Tibet.     

Carbon mineralization in saline soils as affected by residue composition and water potential

In saline soils under semi-arid climate, low matric and osmotic potential are the main stressors for microbes. But little is known about the impact of water potential (sum of matric and osmotic potential) and substrate composition on microbial activity and biomass in field collected saline soils. Three sandy loam soils with electrical conductivity of the saturated soil extract (EC_e) 3.8, 11 and 21 dS m^?1 (hereafter referred to EC3.8, EC11 and EC21) were kept at optimal water content for 14 days. After this pre-incubation, the soils were either left at optimal water content or dried to achieve water potentials of ?2.33, ?2.82, ?3.04 and ?4.04 MPa. Then, the soils were amended with 20 g?kg^?1 pea or wheat residue to increase nutrient supply. Carbon dioxide emission was measured over 14 days; microbial biomass C was measured at the end of the experiment. Cumulative respiration decreased with decreasing water potential and was significantly (P?<?0.05) lower in soils at water potential ?4 MPa than in soils at optimal water content. The effect of residue type on the response of cumulative respiration was inconsistent; with residue type having no effect in the saline soils (EC11 and EC21) whereas in the non-saline soil (EC3.8), the decrease in respiration with decreasing water potential was less with wheat than with pea residue. At a given water potential, the absolute and relative (in percentage of optimal water content) cumulative respiration was lower in the saline soils than in the non-saline soil. This can be explained by the lower osmotic potential and the smaller microbial biomass in the saline soils. However, even at a similar osmotic potential, cumulative respiration was higher in the non-saline soil. It can be concluded that high salt concentrations in the soil solution strongly reduce microbial activity even if the water content is relatively high. The stronger relative decrease in microbial activity in the saline soils at a given osmotic potential compared to the non-saline soil suggests that the small biomass in saline soils is less able to tolerate low osmotic potential. Hence, drying of soil will have a stronger negative effect on microbial activity in saline than in non-saline soils.     

Effects of natural (flooding and drought) and anthropogenic (copper and salinity) stressors on the earthworm Aporrectodea caliginosa under field conditions

Laboratory toxicity tests are usually conducted under stable conditions, while exposures in the field occur under variable environmental conditions. Field studies are therefore more appropriate in understanding the effect of single or mixed pollutants in the environment. Short-term interactive effects of natural environmental factors (flooding and drought) and anthropogenic stressors (copper and salinity) on the earthworm Aporrectodea caliginosa were investigated using outdoor microcosm experiments. Specimens of the lumbricid earthworm A. caliginosa were exposed in microcosms loaded with soils with increasing salinity with electrical conductivity (EC) ranging from 0.08 to 1.05 dS m^?1, with or without copper oxychloride spray treatments at recommended and elevated dosages. The experiment was conducted in August/September (end of winter) and repeated in November/December (end of spring) in the Stellenbosch area, South Africa to attain exposure under variable environmental conditions. In the soil, changes in Cu concentrations along the gradient of salinity were monitored using three methods: CaCl₂, DTPA and nitric acid extraction. Survival, weight change, and cocoon production of worms and body Cu concentrations were used as indices of interaction. None of the three extraction methods could reveal interactive effects between salinity and Cu in both seasons either because concentrations of Cu were too low or below detection limits. Copper, on its own, did not have a significant effect on the measured worm parameters during both seasons. During the winter experiment, flooding of microcosms significantly reduced the survival and affected the weight change of worms, and probably caused leaching of chemicals. Interaction between salinity and Cu had no significant effects on the measured worm parameters in winter while salinity only had a significant negative effect on weight change of worms. During spring, significant synergistic interaction between salinity and Cu occurred but only at 0.3 dS m^?1 by day 14 of the exposure period. At this and higher levels, salinity had a significant individual effect on survival and weight change of worms at days 14 and 28. The results indicate that higher toxicity of salinity could be expected during the dry spring periods than during the wet winter periods which are typical for southern temperate zones.     

Changes of microbial properties in (near-) rhizosphere soils after phytoextraction by Sedum alfredii H: A rhizobox approach with an artificial Cd-contaminated soil

The ultimate goal of soil remediation is to restore soil health. Soil microbial parameters are considered to be effective indicators of soil health. The aim of this study was to determine the effects of phytoextraction on microbial properties through the measurement of soil microbial biomass carbon, soil basal respiration and enzyme activities. For this purpose, a pre-stratified rhizobox experiment was conducted with the Cd hyperaccumulator Sedum alfredii H. for phytoextraction Cd from an artificial contaminated soil (15.81 mg kg⁻¹) under greenhouse conditions. The plant and soil samples were collected after growing the plant for three and six months with three replications. The results indicated that the ecotype of S. alfredii H. originating from an ancient silver mining site was a Cd-hyperaccumulator as it showed high tolerance to Cd stress, the shoot Cd concentration were as high as 922.6 mg kg⁻¹ and 581.9 mg kg⁻¹ at the two samplings, and it also showed high BF (58.4 and 36.8 after 3 and 6 months growth), and TF (5.8 and 5.1 after 3 and 6 months growth). The amounts of Cd accumulated in the shoots of S. alfredii reached to an average of 1206 μg plant⁻¹ after 6 months growth. Basal respiration, invertase and acid phosphatase activities of the rhizosphere soil separated by the shaking method were significantly higher (P < 0.01) than that of the near-rhizosphere soil and the unplanted soil after 3 months growth, so were microbial biomass carbon, urease, invertase and acid phosphatase activities of the rhizosphere soil after 6 months growth. Acid phosphatase activity of the 0–2 mm sub-layer rhizosphere soil collected by the pre-stratified method after 3 months growth was significantly higher (P < 0.05) than that of other sub-layer rhizosphere soils and bulk soil, and so were microbial biomass carbon, basal respiration, urease, invertase and acid phosphatase activities of the 0–2 mm sub-layer rhizosphere soil after 6 months growth. It was concluded that phytoextraction by S. alfredii could improve soil microbial properties, especially in rhizosphere, and this plant poses a great potential for the remediation of Cd contaminated soil.     

Impact of bovine urine deposition on soil microbial activity,biomass, and community structure

Nitrogen (N) from urine excreted by grazing animals can be transformed into N compounds that have detrimental effects on the environment. These include nitrate, which can cause eutrophication of waterways, and nitrous oxide, which is a greenhouse gas. Soil microbes mediate all of these N transformations, but the impact of urine on microbes and how initial soil conditions and urine chemical composition alter their responses to urine are not well understood. This study aimed to determine how soil inorganic N pools, nitrous oxide fluxes, soil microbial activity, biomass, and the community structure of bacteria containing amoA (nitrifiers), nirK, and nirS (denitrifiers) genes responded to the addition of urine over time. Bovine urine containing either a high (15.0 g K⁺ l^?1) or low salt content (10.4 g K⁺ l^?1) was added to soil cores at either low or high moisture content (hereafter termed dry and wet soil respectively; 35% or 70% water-filled pore space after the addition of urine). Changes in soil conditions, inorganic N pools, nitrous oxide fluxes, and the soil microbial community were then measured 1, 3, 8, 15, 29 and 44 days after urine addition. Urine addition increased soil ammonium concentrations by up to 2 mg g d.w.^?1, soil pH by up to 2.7 units, and electrical conductivity (EC) by 1.0 and 1.6 dS m^?1 in the low and high salt urine treatments respectively. In response, nitrate accumulation and nitrous oxide fluxes were lower in dry compared to wet urine-amended soils and slightly lower in high compared to low salt urine-amended soils. Nitrite concentrations were elevated (>3 μg g d.w.^?1) for at least 15 days after urine addition in wet urine-amended soils, but were only this high in the dry urine-amended soils for 1 day after the addition of urine. Microbial biomass was reduced by up to half in the wet urine-amended soils, but was largely unaffected in the dry urine-amended soils. Urine addition affected the community structure of ammonia-oxidising and nitrite-reducing bacteria; this response was also stronger and more persistent in wet than in dry urine-amended soils. Overall, the changes in soil conditions caused by the addition of urine interacted to influence microbial responses, indicating that the effect of urine on soil microbes is likely to be context-dependent.     

The extent of drying influences the flush of respiration after rewetting in non-saline and saline soils

Drying and rewetting are common events in soils during summer, particularly in Mediterranean climate where soil microbes may be further challenged by salinity. Previous studies in non-saline soils have shown that rewetting induces a flush of soil respiration, but little is known about how the extent of drying affects the size of the respiration flush or how drying and rewetting affects soil respiration in saline soils. Five sandy loam soils, ranging in electrical conductivity of the saturated soil extract (ECe) from 2 to 48 dS m⁻¹ (EC2, EC9, EC19, EC33 and EC48), were kept at soil water content optimal for respiration or dried for 1, 2, 3, 4 or 5 days (referred to 1D, 2D, 3D, 4D and 5D) and maintained at the achieved water content for 4 days. Then the soils were rewet to optimal water content and incubated moist for 5 days. Water potential decreased with increasing drying time; in the 5D treatment, the water potential ranged between −15 and −30 MPa, with the lowest potentials in soil EC33. In moist and dry conditions, respiration rates per unit soil organic C (SOC) were highest in soil EC19. Respiration rates decreased with increasing time of drying; when expressed relative to constantly moist soil, the decline was similar in all soils. Rewetting of soils only induced a flush of respiration compared to constantly moist soil when the soils were dried for 3 or more days. The flush in respiration was greatest in 5D and smallest in 3D, and greater in EC2 than in the saline soils. Cumulative respiration per unit SOC was highest in soil EC19 and lowest in soil EC2 Cumulative respiration decreased with increasing time of drying, but in a given soil, the relationship between water potential during the dry phase and cumulative respiration at the end of the experiment was weaker than that between respiration rate during drying and water potential. In conclusion, rewetting induced a flush in respiration only if the water potential of the soils was previously decreased at least 3-fold compared to the constantly moist soil. Hence, only marked increases in water potential induce a flush in respiration upon rewetting. The smaller flush in respiration upon rewetting of saline soils suggests that these soils may be less prone to lose C when exposed to drying and rewetting compared to non-saline soils.     

Bacterial community structure and microbial activity in different soils amended with biogas residues and cattle slurry

Anaerobic digestion of organic materials generates residues of differing chemical composition compared to undigested animal manures, which may affect the soil microbial ecosystem differently when used as fertilizers. This study investigated the effects of two biogas residues (BR-A and BR-B) and cattle slurry (CS) applied at rates corresponding to 70 kg NH₄⁺-N ha⁻¹ on bacterial community structure and microbial activity in three soils of different texture (a sandy, a clay and an organic clay soil). 16S rRNA genes were targeted in PCR reactions and bacterial community profiles visualized using terminal restriction fragment length polymorphism. General microbial activity was measured as basal respiration (B-resp), substrate-induced respiration (SIR), specific growth rate (μ_SIR), metabolic quotient (qCO₂) and nitrogen mineralization capacity (NMC). Non-metric multidimensional scaling analysis visualized shifts in bacterial community structure related to microbial functions. There were significant differences in bacterial community structure after 120 days of incubation (+20 °C at 70% of WHC) between non-amended (control) and amended soils, especially in the sandy soil, where CS caused a more pronounced shift than biogas residues. Terminal-restriction fragment (TRF) 307, the predominant peak in CS-amended sandy soil, was identified as possibly Bacillus or Streptococcus. TRF 226, the dominant peak in organic soil amended with BR-B, was classified as Rhodopseudomonas. B-resp significantly increased and SIR decreased in all amendments to organic soil compared with the control, potentially indicating decreased efficiency of heterotrophic microorganisms to convert organic carbon into microbial biomass. This was also reflected in an elevated qCO₂ in the organic soil. The μ_SIR level was higher in the sandy soil amended with BR-A than with BR-B or CS, indicating a shift toward species capable of rapidly utilizing glucose. NMC was significantly elevated in the clay and organic soils amended with BR-A and BR-B and in the sandy soil amended with BR-B and CS. Thus, biogas residues and cattle slurry had different effects on the bacterial community structure and microbial activity in the three soils. However, the effects of biogas residues on microbial activities were comparable in magnitude to those of cattle slurry and the bacterial community structure was less affected. Therefore, we do not see any reason not to recommend using biogas residues as fertilizers based on the results presented.     

Impact of plants on the microbial activity in soils with high and low levels of copper

Elevated copper (Cu) concentrations have been shown to decrease the microbial activity in soils. Plants can have beneficial effects on the biological activity of soils mainly through their root exudates. In this study we investigated the impact of various plant species with different Cu tolerance levels on the microbial activity in two soils with low (10 mg/kg) and high (180 mg/kg) copper concentrations. The soil was a Kahangi Sandy Loam. Three different plants, Agrostis capillaris ‘Parys’ tolerant for Cu, Agrostis capillaris ‘Highland’ non-tolerant and Helianthus annuus tolerant and a hyper-accumulator for Cu were used. To increase the Cu availability to plants, EDTA was added to some of the pots 20 days after sowing. The effect of Cu contamination on the biological activity of soil in the presence and absence of plant growth was evaluated by measuring the dehydrogenase activity, the microbial biomass, the basal respiration, and the potential nitrification.Results show that plants increased the microbial activity in the low Cu soil. In the high Cu soil the microbial activity seemed to be related to the plant health. With the Cu-tolerant Agrostis capillaris ‘Parys’, the microbial activity increased faster than with the other plant species. Up to 50 days after sowing, the tolerant grass Agrostis capillaris ‘Parys’ had a higher plant biomass and was much healthier than the non-tolerant grass. Later on the growth of the non-tolerant Agrostis capillaris ‘Highland’ recovered, and the microbial activity of the soil reached close to those recorded for the soil treatments with the Cu-tolerant plant species. The addition of EDTA delayed the increase in microbial activity even further. The proportion of microbial biomass carbon in the organic fraction was higher in the low Cu soil than in the high Cu soil, with ratios ranging from 1.3 to 3.3 and from 0.5 to 1.7 respectively. The basal respiration rate in the original soil was significantly lower in the high Cu soil than in the low Cu soil, and was generally increased by the presence of plants.     

Emission of carbon dioxide and dynamics of inorganic N in a gradient of alkaline saline soils of the former lake Texcoco

A plan was developed to apply biosolid to soil of the former lake Texcoco to fertilize the pioneer vegetation. Because, no information exists about how differences in electrolytic conductivity (EC) might affect mineralization of biosolid and dynamics of C and N in soil, 20 soil samples forming a gradient in EC ranging from 22 to 150 dS m⁻¹ were characterized, amended with 500 mg biosolid C kg⁻¹ dry soil and incubated aerobically at 22 ± 2 °C while production of CO₂, concentrations of ammonium (NH₄⁺), nitrite (NO₂⁻), and nitrate (NO₃⁻), and NH₃ volatilization were monitored at 22 ± 2 °C for 70 days. Soil characteristics showed large variations with maximum values often >10-times larger than minimum values. The production of CO₂ in the unamended soil ranged from 25 to 159 mg CO₂-C kg⁻¹ day⁻¹ and NH₃ volatilization from 0 to 189 μg NH₃-N kg⁻¹ day⁻¹_. Application of biosolid increased production of CO₂ significantly 1.4-fold and volatilization of NH₃ 11.5-fold. The EC explained most of the variation in production of CO₂, while particle size distribution explained most of the variation in volatilization of NH₃. The concentration of NH₄⁺ in the biosolid-amended soil decreased sharply in the first 14 days, with the EC explaining most of the variation found, and remained constant thereafter with a small increase at day 70. Significant increases in the concentration of NO₃⁻ were generally found in soil with EC < 64 dS m⁻¹. The EC explained most of the variation in production of CO₂, and dynamics of NH₄⁺ and NO₃⁻ while clay positively and sand content negatively affected NH₃ volatilization. It was found that increases in EC inhibited C and N mineralization in soil of the former lake Texcoco.     

Salinity and sodicity affect soil respiration and dissolved organic matter dynamics differentially in soils varying in texture

The individual effects of salinity and sodicity on organic matter dynamics are well known but less is known about their interactive effects. We conducted a laboratory incubation experiment to assess soil respiration and dissolved organic matter (DOM) dynamics in response to salinity and sodicity in two soils of different texture. Two non-saline non-sodic soils (a sand and a sandy clay loam) were leached 3–4 times with solutions containing different concentrations of NaCl and CaCl₂ to reach almost identical electrical conductivity (EC_1:5) in both soils (EC_1:5 0.5, 1.3, 2.5 and 4.0 dS m^?1 in the sand and EC_1:5 0.7, 1.4, 2.5 and 4.0 dS m^?1 in the sandy clay loam) combined with two sodium absorption ratios: SAR < 3 and 20. Finely ground wheat straw residue was added (20 g kg^?1) as substrate to stimulate microbial activity. Cumulative respiration was more strongly affected by EC than by SAR. It decreased by 8% at EC 1.3 and by 60% at EC 4.0 in the sand, whereas EC had no effect on respiration in the sandy clay loam. The apparent differential sensitivity to EC in the two soils can be explained by their different water content and therefore, different osmotic potential at the same EC. At almost similar osmotic potential: ?2.92 MPa in sand (at EC 1.3) and ?2.76 MPa in the sandy clay loam (at EC 4.0) the relative decrease in respiration was similar (8–9%). Sodicity had little effect on cumulative respiration in the soils, but DOC, DON and specific ultra-violet absorbance (SUVA) were significantly higher at SAR 20 than at SAR < 3 in combination with low EC in both soils (EC 0.5 in the sand and EC 0.7 and 1.4 in the sandy clay loam). Therefore, high SAR in combination with low EC is likely to increase the risk of DOC and DON leaching in the salt-affected soils, which may lead to further soil degradation.     

Effect of paclobutrazol on microbial biomass,respiration and cellulose decomposition in soil

Paclobutrazol is a plant growth regulator largely utilized in mango cultivation and usually applied directly to soil. The aim of this study was to examine the effect of paclobutrazol on soil microbial biomass, soil respiration and cellulose decomposition in Brazilian soils under laboratory conditions. Soil samples were collected from fields with and without a reported history of paclobutrazol application. A solution of paclobutrazol (8 mg of active ingredient kg^?1 of soil) was added to soils, which were then incubated at 28 °C for 30 days. Paclobutrazol decreased soil microbial biomass, soil respiration and cellulose decomposition in soil with and without a report of paclobutrazol application, while significant increase was observed in the respiratory quotient (qCO₂). Our results show that the soil microbiological attributes were negatively affected by paclobutrazol in short-term experiment.     

The relationships among microbial parameters and the rate of organic matter mineralization in forest soils,as influenced by forest type

Vegetation type influences the rate of accumulation and mineralization of organic matter in forest soil, mainly through its effect on soil microorganisms. We investigated the relationships among forest types and microbial biomass C (MBC), basal respiration (R_B), substrate-induced respiration (R_S), N mineralization (N_min), specific growth rate μ, microbial eco-physiology and activities of seven hydrolytic enzymes, in samples taken from 25 stands on acidic soils and one stand on limestone, covering typical types of coniferous and deciduous forests in Central Europe. Soils under deciduous trees were less acidic than soils of coniferous forests, which led to increased mineralizing activities R_B and N_min, and a higher proportion of active microbial biomass (R_S/MBC) in the Of horizon. This resulted in more extractable organic C (0.5 M K₂SO₄) in soils of deciduous forests and a higher accumulation of soil organic matter (SOM) in coniferous forest soil. No effect of forest type on the microbial properties was detected in the Oh horizon and in the 0–10 cm layer. The microbial quotient (MBC/C_org), reflecting the quality of organic matter used for microbial growth, was higher in deciduous forests in all three layers. The metabolic quotient qCO₂ (R_B/MBC) and the specific growth rate μ, estimated using respiration growth curves, did not differ in soils of both forest types. Our results showed that the quality of SOM in coniferous forests supported microorganisms with higher activities of β-glucosidase, cellobiosidase and β-xylosidase, which suggested the key importance of fungi in these soils. Processes mediated by bacteria were probably more important in deciduous forest soils with higher activities of arylsulphatase and urease. The results from the stand on limestone showed that pH had a positive effect on microbial biomass and SOM mineralization.     

Rapid estimation of microbial biomass in grassland soils by ultra-violet absorbance

A reliable and simple technique for estimating soil microbial biomass (SMB) is essential if the role of microbes in many soil processes is to be quantified. Conventional techniques are notoriously time-consuming and unreproducible. A technique was investigated that uses the UV absorbance at 280 nm of 0.5 M K₂SO₄ extracts of fumigated and unfumigated soils to estimate the concentrations of carbon, nitrogen and phosphorus in the SMB. The procedure is based on the fact that compounds released after chloroform fumigation from lysed microbial cells absorb in the near UV region. Using 29 UK permanent grassland soils, with a wide range of organic matter (2.9–8.0%) and clay contents (22–68%), it was demonstrated that the increase in UV absorbance at 280 nm after soil fumigation was strongly correlated with the SMB C (r=0.92), SMB N (r=0.90) and SMB P (r=0.89), as determined by conventional methods. The soils contained a wide range of SMB C (412–3412 μg g⁻¹ dry soil), N (57–346 μg g⁻¹ dry soil) and P (31–239 μg g⁻¹ dry soil) concentrations. It was thus confirmed that the UV absorbance technique described was a rapid, simple, precise and relatively inexpensive method of estimating soil microbial biomass.