Earthworm and microbe response to litter and soils of tropical forest plantations with contrasting C:N:P stoichiometric ratios

1

The stoichiometry of resources is increasingly acknowledged as a major control of consumer activity and abundance. Chemical properties of litter, the main source of food for decomposers, are likely to be important drivers of decomposer activity.

2

Theory predicts a high control of resource stoichiometry on the abundance of consumer organisms that maintain strict homeostasis, due to costs associated with the regulation of nutrient balance in their body tissue. Decomposer efforts in nutrient acquisition should be related to imbalances in resource stoichiometry.

3

A 21 year old experimental plantation of monospecific plots of trees with leaves of contrasting chemistry was used to test four hypotheses: (i) soil and litter nutrient stoichiometry (C, N, P) are linked; (ii); soil enzyme activity ratios and stoichiometry are linked; (iii) earthworms’ tissue stoichiometry does not depend on soil and litter stoichiometry (homeostasis); (iv) earthworm density is dependent upon phosphorus availability, the most limiting nutrient in soils at this site, and, to a lesser extent, to nitrogen availability.

4

We found (i) no relationship between litter and soil stoichiometry, (ii) microbial activity was linked to soil stoichiometry, (iii) earthworms showed strict homeostasis in their tissue and (iv) earthworm abundance increased with P availability.

5

We discuss the mechanisms that might lead to these patterns.

     

Biological hurdles to the control of TB in cattle: A test of two hypotheses concerning wildlife to explain the failure of control

Since the 1970s the control of bovine tuberculosis (bTB) in cattle, predominantly in the SW of England has proved continually recalcitrant; it is currently increasing at an annual rate of 18%. This deterioration has occurred despite a succession of government schemes involving killing badgers, Meles meles, with the intention of reducing transmission of bTB to cattle. Of various hypotheses proposed to explain this failure of control, some concern agricultural practice, but two concern wildlife. The latter are, first, that wild mammalian species other than badgers are important in the transmission of bTB, and second, that a perturbation effect amongst those badgers surviving a cull countermands the hoped-for reduction of bTB transmission to cattle or even increases it. We review our own studies of these two hypotheses in the context of other findings. We conclude that the other species hypothesis does not provide a general explanation for the failure of bTB control. We also conclude that the perturbation hypothesis is supported by the data and does provide one plausible mechanism to explain why culling badgers has not generally achieved control of bTB in cattle. We have reviewed the relevance of perturbation with respect to three key questions:

(a)

is there evidence of a perturbation effect on badger behavioural ecology?

(b)

is there evidence of a perturbation effect on prevalence of bTB in badgers?

(c)

are any observed effects of a magnitude relevant to bTB control policy?

The results of the Randomised Badger Culling Trial (RBCT) and our own studies indicate that to have any prospect of contributing significantly to controlling bTB in cattle, a badger cull would have to be undertaken over a very large area. Considering the likely very important role of cattle-to-cattle transmission, and the opportunities for solutions in terms of farm management and surveillance, it would be inappropriate (and probably impractical) to undertake such a cull now.     

Soil fertility in a large dryland floodplain: Patterns,processes and the implications of water resource development

1.

Primary production on semiarid floodplains supports a diverse local and regional fauna. Reduced flooding from water resource development (WRD) may affect floodplain production by decreasing water and nutrient supply.     

Native vegetation cover thresholds associated with species responses

We examined data on bird and reptile assemblages in a plantation landscape in southern New South Wales, south-eastern Australia, for evidence of threshold responses to the amount of native eucalypt vegetation in circular areas of 2000 and/or 1000 m around field survey sites. These circular areas contained varying proportions of native Eucalyptus and exotic radiata pine Pinus radiata forest thereby providing a basis for examining potential threshold effects in relation to the area of native vegetation cover. For bird species richness or the probability of detection of individual bird species we found no empirical evidence of a threshold response to the area of native vegetation cover, or any other potential explanatory variables. All relationships were characterised by considerable variability in the response data. “Broken-stick” relationships which involved sudden change points did not fit the response data better than smooth relationships obtained from generalised additive or linear models. As with birds, there was no evidence that a threshold model between lizard richness and the amount of native vegetation within 1000 m described the relationship any better than a smooth, continuous or other type of relationship. Several related factors may explain our results. An important one is that species-specific responses to landscape conditions mean that marked thresholds will not be seen for an aggregate measure like species richness at a given value for a given landscape variable. Another is that factors other than the amount of native vegetation may significantly influence underlying patterns of species occurrence. This highlights a need to be aware of the potential effects of various ecological processes, even when a substantial amount of native vegetation cover remains.Our findings do not rule out the possibility of the existence of threshold relationships. However, irrespective of the choice of measure of predictor variable (e.g., the amount of native vegetation cover), it will often be difficult to detect and estimate threshold responses due to high inherent variability - a characteristic of the vast majority of ecological datasets. Furthermore, even if it is possible to estimate functional (threshold) forms and although they might be useful from an explanatory perspective, in most instances they are likely to be of limited value in a predictive sense. This calls into question the practical significance of the threshold concept.     

Molecular phylogenetics and systematics of Trigonella L. (Fabaceae) based on nuclear ribosomal ITS and chloroplast trnL intron sequences

The genus Trigonella includes the widely cultivated T. foenum-graecum and a number of other medicinal and aromatic plant species distributed around the Mediterranean region. Sectional delimitation of Trigonella species is still based on morphology and interspecific relationships within the genus are not yet sufficiently resolved. Phylogenetic relationships in 22 species representing 11 of the 12 sections recognized within the genus Trigonella were analyzed using nuclear ITS and plastid trnL-F DNA sequences. Within nuclear ITS region, ITS-II was found to evolve faster compared to ITS-I. Maximal phylogenetic resolution and support was obtained in the combined analysis of the two selected regions. Trees resulting from maximum parsimony as well as Bayesian inference of combined data provided evidence for Trigonella being monophyletic with high support but did not agree with the traditional subgeneric division. Phylogenetic reconstructions indicated three major lineages supported by apomorphies in inflorescence and stipule. The phylogram supported the sectional delimitation of sections Cylindricae, Vérae, Samaroideae, Pectinatae, Erosae and Callicerates. There is strong support to combine monotypic sections Pectinatae and Erosae into one. However, species belonging to section Foenum-graecum and Falcatulae clustered in different subclades, contrary to their current classification. Inflorescence type appears to be a useful character with taxonomic potential for phenetic implications at subgeneric and sectional level within the genus. Moreover, some legume and seed characteristics, considered important in existing taxonomy, appear to have arisen more than once in Trigonella and are homoplastic.     

Discriminating power of microsatellites in cranberry organelles for taxonomic studies in <Emphasis Type="Italic">Vaccinium</Emphasis> and Ericaceae

Simple sequence repeats (SSRs) in chloroplast and mitochondrial DNA, which have not been previously developed in the Ericaceae or, more specifically, in the genus Vaccinium, can be powerful tools for determining evolutionary relationships among taxa. In this study, 30 chloroplast, 23 mitochondrial, and 1 mitochondrion-like SSRs were identified in cranberry (V. macrocarpon), and primer-pairs were developed and tested for each locus. Although no polymorphisms were detected for any of the 54 SSR loci in nine diverse cranberry genotypes, all primers were cross-transferable to some extent to a panel of 12 additional Vaccinium taxa and four non-Vaccinium Ericaceae species. A Neighbor-Joining tree of the estimated average squared distances resolved the species by genus and by section within Vaccinium. Similar topologies with increased branch support were observed in Bayesian inference trees constructed from the DNA sequences of six plastid and two mitochondrial SSR loci. Two multiplexing/poolplexing panels of M13 fluorescently labeled primers, which amplify 24 of the 54 markers, were developed and can serve as an efficient, cost-effective means for characterizing the basic molecular phylogeny of Vaccinium. Increased understanding of evolutionary relationships among Vaccinium species should facilitate interspecific hybridization and introgression efforts to improve economically important traits of commercial berry crops.     

Greater sage-grouse as an umbrella species for sagebrush-associated vertebrates

Widespread degradation of the sagebrush ecosystem in the western United States, including the invasion of cheatgrass, has prompted resource managers to consider a variety of approaches to restore and conserve habitats for sagebrush-associated species. One such approach involves the use of greater sage-grouse, a species of prominent conservation interest, as an umbrella species. This shortcut approach assumes that managing habitats to conserve sage-grouse will simultaneously benefit other species of conservation concern. The efficacy of using sage-grouse as an umbrella species for conservation management, however, has not been fully evaluated. We tested that concept by comparing: (1) commonality in land-cover associations, and (2) spatial overlap in habitats between sage-grouse and 39 other sagebrush-associated vertebrate species of conservation concern in the Great Basin ecoregion. Overlap in species’ land-cover associations with those of sage-grouse, based on the ? (phi) correlation coefficient, was substantially greater for sagebrush obligates than non-obligates . Spatial overlap between habitats of target species and those associated with sage-grouse was low (mean ? = 0.23), but somewhat greater for habitats at high risk of displacement by cheatgrass (mean ? = 0.33). Based on our criteria, management of sage-grouse habitats likely would offer relatively high conservation coverage for sagebrush obligates such as pygmy rabbit (mean ? = 0.84), but far less for other species we addressed, such as lark sparrow (mean ? = 0.09), largely due to lack of commonality in land-cover affinity and geographic ranges of these species and sage-grouse.     

From a stinking wastewater disposal field toward a recreation area—the story of an unconventional soil remediation in Berlin,Germany

Purpose

Wastewater irrigation is still a common practice in many cities worldwide. After ending the wastewater irrigation, the question arises as to how the highly polluted areas can be reused. Mostly, the remediation costs for liming or adding synthetic soil conditioners are too high for decision makers, often leading to unattractive wastelands in neighboring suburbs. This story shows how part of a former wastewater disposal field in Berlin (Germany) was remediated by adding and mixing loam-rich glacial until excavated from subway construction work. The remediation led to long-term improvements of soil and landscape, which nowadays is an attractive forested recreation area. Part of this landscape is used as an ecological lab for research, art, and education.

Materials and methods

The article summarizes the results of soil analysis of the contamination status and remediation technique over the last 2 decades. We collected and reevaluated historical data, research results, technical reports, and graphic materials concerning the wastewater disposal field in Berlin, Germany.

Results and discussion

The remediation concept without adding any synthetic substances was a successful soft technology leading to (i) a reduction of the long-term groundwater risk, (ii) an immobilization of the trace element concentration in the soil solution, and (iii) a reduction of the metal uptake by plants. Remediation led to much better conditions for plant growth, soil fauna, and microbiological activity, which improved the environment in a sustainable way. The implementation of a new landscape concept combining ecology, culture, and art totally changed the character of the landscape from former stinking wastewater fields to present-day attractive sites that can be used for many purposes.

Conclusions

The remediation of the former wastewater disposal fields, using natural glacial till materials rich in clay and silt, became a “story of success.” However, a remediation project of this type and scope only becomes reality if all responsible actors in society participate continuously. We conclude that stakeholders should not focus only on remediation costs but also on the benefits for society: reclaiming waste sites significantly improves our well-being.

     

Thresholds in landscape parameters: occurrence of the white-browed treecreeper Climacteris affinis in Victoria, Australia

The concept of critical thresholds of habitat loss has recently received considerable attention in conservation biology and landscape ecology, yet empirical examples of thresholds are scarce. Threatened species management could benefit from recognition of thresholds because conditions under which populations are at risk can be specified. In this study, 56 woodland patches in north-west Victoria were surveyed for the white-browed treecreeper Climacteris affinis, a threatened insectivorous bird of the semi-arid zone of southern Australia. Comparisons with historic records indicate the species’ range is contracting in Victoria. Using logistic regression and hierarchical partitioning, two models of patch occupancy were developed. Tree species composition was an important factor in both models, confirming the treecreepers’ affinity for belah Casuarina pauper and slender cypress-pine Callitris gracilis-buloke Allocasuarina luehmannii woodlands in north-west Victoria. The first model emphasized the importance of demographic isolation: probability of patch occupancy decreased with distance to the nearest occupied patch. A threshold response in demographic isolation was apparent. In agricultural landscapes, most suitable woodland patches within 3 km of an occupied patch were occupied, whereas patches beyond the threshold were vacant. The threshold distance increased to a minimum of 8 km in a matrix of native vegetation, suggesting landscape context affects the response of white-browed treecreepers to habitat fragmentation. Demographic isolation is a quasi-dependent variable and therefore a second model was developed using surrogate variables for demographic isolation. A positive relationship with the proportion of woodland cover in the landscape (100 km²) emerged as the pre-eminent explanatory factor. Depending on woodland quality, a threshold of patch occupancy was apparent at levels of woodland cover between 15 and 25%. However, belah and slender cypress-pine-buloke woodlands now cover only 10% of their original extent in the region. These results highlight the inter-dependence of patch isolation with the amount and quality of habitat in the landscape and the implications this has for maintaining functional connectivity. The retention (or restoration) of suitable habitat is the critical issue for conservation of the white-browed treecreeper, but in landscapes below the threshold of habitat cover, viability of local populations may be influenced by the configuration and quality of remaining habitat.     

Collection and evaluation of wild tulip (<Emphasis Type="Italic">Tulipa</Emphasis> spp.) resources in China

China is known throughout the world as one of the most diverse centres of wild Tulipa L. resources. There are 17 wild Tulipa species distributed in China, and 12 species are only distributed in Xinjiang Province. In this paper, total 83 accessions were collected from Xinjiang, Liaoning and several other provinces. Their distribution, collection, classification and evaluation were described. According to morphological characteristics, they were classified into eight species, which included T. sinkiangensis Z. M. Mao, T. altaica Pall. ex Spreng., T. iliensis Regel, T. heterophylla Baker, T. buhseana Boiss., T. thianschanica Regel, T. schrenkii Regel and T. edulis (Miq.) Baker. Their phenotypic genetic relationships were analysed and showed that the eight Tulipa species were divided into two groups: Group I included one species T. edulis, and Group II included the other seven species. Bulb renewal was observed in eight wild Tulipa species; T. iliensis and T. edulis showed that one or more long fleshy stolons formed horizontally or vertically at the basal plate of the mother bulbs, new bulblets (dropper) appeared at the top of each fleshy stolon, and the mother bulbs eventually disappeared. The analytic hierarchy process was used to evaluate the ornamental value, utilization potential and ecological adaptability of the eight identified species. The results showed that T. iliensis, T. buhseana and T. thianschanica had better ornamental value and utilization potential than any other species. The distribution, collection, classification, and evaluation of wild Tulipa species could be helpful in creating novel tulip germplasms in China.     

Phylogenetic relationships within <Emphasis Type="Italic">Lactuca</Emphasis> L. (Asteraceae), including African species,based on chloroplast DNA sequence comparisons

Lettuce (Lactuca sativa L.) belongs to the genus Lactuca L. and is an important vegetable worldwide. Over the past decades, there have been many controversies about the phylogeny of Lactuca species due to their complex and diverse morphological characters and insufficient molecular sampling. In this study we provide the most extensive molecular phylogenetic reconstruction of Lactuca, including African wild species, using two chloroplast genes (ndhF and trnL-F). The sampling covers nearly 40 % of the total endemic African Lactuca species and 34 % of the total Lactuca species. DNA sequences from all the subfamilies of Asteraceae in Genebank and those generated from Lactuca herbarium samples were used to establish the affiliation of Lactuca within Asteracaeae. Based on the subfamily tree, we selected 33 ndhF sequences from 30 species and 79 trnL-F sequences from 48 species to infer relationships within the genus Lactuca using randomized axelerated maximum likelihood and Bayesian inference analyses. Biogeographical, chromosomal and morphological character states were reconstructed over the Bayesian tree topology. We conclude that Lactuca contains two distinct phylogenetic clades—the crop clade and the Pterocypsela clade. Other North American, Asian and widespread species either form smaller clades or mix with the Melanoseris species. The newly sampled African endemic species probably should be treated as a new genus.