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1.
Djabbar Hariri Michel Meyer 《European journal of plant pathology / European Foundation for Plant Pathology》2007,118(1):1-10
In April 2001, stunted barley plants bearing mosaic symptoms were observed in a field in France (Marne Department, 51). Rod-shaped
and flexuous particles were visualized by electron microscopy and positive serological reactions were detected by ELISA with
Barley yellow mosaic virus (BaYMV) and Soil-borne cereal mosaic virus (SBCMV) polyclonal antisera. The tubular virus which was soil transmissible to barley cv. Esterel was separated from BaYMV
by serial mechanical inoculations to barley cv. Esterel. This furo-like virus, in contrast to a French isolate of SBCMV, could
be transmitted to Hordeum vulgare, Avena sativa, Beta vulgaris and Datura stramonium. RT-PCR was used to amplify the 3′-terminal 1500 nucleotides of RNA1 and the almost complete sequence of RNA2. Nucleotide
and amino acid sequence analyses revealed that the French virus infecting barley is closely related to a Japanese isolate
of Soil-borne wheat mosaic virus (SBWMV-JT) which was originally isolated from barley. This French isolate was named SBWMV-Mar. The 3′ UTRs of both RNAs can
be folded into tRNA-like structures which are preceded by a predicted upstream pseudoknot domain with seven and four pseudoknots
for RNA1 and RNA2, respectively. The four pseudoknots strongly conserved in RNAs 1 and 2 of SBWMV-Mar show strong similarities
to those described earlier in SBWMV RNA2 and were also found in the 3′ UTR of Oat golden stripe virus RNAs 1 and 2 and Chinese wheat mosaic virus RNA2. Sequence analyses revealed that the RNAs 2 of SBWMV-Mar and -JT are likely
to be the product of a recombination event between the 3′ UTRs of the RNAs 2 of SBWMV and SBCMV. This is the first report
of the occurrence of an isolate closely related to SBWMV-JT outside of Japan. 相似文献
2.
Tri Asmira Damayanti Desmiarti Susilo Siti Nurlaelah Dewi Sartiami Tetsuro Okuno Kazuyuki Mise 《Journal of General Plant Pathology》2008,74(6):438-442
Severe mosaic with leaf malformation and green vein banding was observed on yam bean in West and Central Java, Indonesia.
Virions of the causal virus were flexuous filaments, about 700 nm in length, with a coat protein of 30 kDa. The virus was
transmitted by mechanical inoculation and by aphids in a nonpersistent manner. The nucleotide sequence of the coat protein
gene had the highest identity with that of Bean common mosaic virus (BCMV, genus Potyvirus) isolate VN/BB2-5. Based on demarcation criteria, including the genome sequence and host range, we tentatively designate
this isolate as BCMV-IYbn (Indonesian yam bean).
The nucleotide sequence reported is available in the DDBJ/EMBL/GenBank databases under accession number AB289438. 相似文献
3.
Masashi Fujinaga Hideki Ogiso Hidetada Wakabayashi Toshiyuki Morikawa Tomohide Natsuaki 《Journal of General Plant Pathology》2009,75(2):157-159
A viral disease was found in Nagano Prefecture, Japan, on statice (Limonium sinuatum) with chlorotic leaf spot, necrotic stunt, and dwarfing. Spherical virus particles 30 nm in diameter were isolated from infected
plants and statice seedlings and caused identical symptoms 4 weeks after mechanical inoculation. Nucleotide and deduced amino
acid sequences of the coat protein showed 98% and 98.7% identities with those of Grapevine Algerian latent virus (GALV) nipplefruit strain. This is the first report in Japan of a viral disease on statice caused by GALV.
The nucleotide sequence data reported here are available in the DDBJ/EMBL/GenBank databases under accession AB461854. 相似文献
4.
Shin-ichi Fuji Nanae Mochizuki Masashi Fujinaga Makoto Ikeda Kouichi Shinoda Seiji Uematsu Hiromitsu Furuya Hideki Naito Fumiyoshi Fukumoto 《Journal of General Plant Pathology》2007,73(3):216-221
Alstroemeria plants were surveyed for viruses in Japan from 2002 to 2004. Seventy-two Alstroemeria plants were collected from Aichi, Nagano, and Hokkaido prefectures and 54.2% were infected with some species of virus. The
predominant virus was Alstroemeria mosaic virus, followed by Tomato spotted wilt virus, Youcai mosaic virus (YoMV), Cucumber mosaic virus (CMV), Alstroemeria virus X and Broad bean wilt virus-2 (BBWV-2). On the basis of nucleotide sequence of the coat protein genes, all four CMV isolates belong to subgroup IA. CMV
isolates induced mosaic and/or necrosis on Alstroemeria. YoMV and BBWV-2 were newly identified by traits such as host range, particle morphology, and nucleotide sequence as viruses
infecting Alstroemeria. A BBWV-2 isolate also induced mosaic symptoms on Alstroemeria seedlings. 相似文献
5.
Tsutomu Matsumoto Hideki Yamamoto Shin-ichi Fuji Masayasu Inoue 《Journal of General Plant Pathology》2008,74(1):76-80
A potyvirus tentatively named Ornithogalum virus 3 (OV-3) was successfully isolated by single-aphid transmissions from O. thyrsoides mix-infected with OV-3, Ornithogalum
mosaic
virus (OrMV) and Ornithogalum stripe mosaic virus (OrSMV). OV-3, a flexuous, rod-shaped particle of ca. 690 nm, was sap and aphid transmissible. The virus
had a narrow host range and caused necrotic mosaic on O. thyrsoides under cold conditions. We therefore propose the name Ornithogalum necrotic mosaic virus (OrNMV) for OV-3. A synergistic increase in symptom severity was apparent on O. thyrsoides mix-infected with OrSMV/OrNMV, but not with either OrMV/OrNMV or OrMV/OrSMV.
The nucleotide sequence data reported is available in the DDBJ/EMBL/GenBank databases under accession number AB282754. 相似文献
6.
Chrysanthemum chlorotic mottle viroid (CChMVd) was detected in Akita Prefecture, Japan, from chrysanthemums (Dendranthema grandiflorum) with distinct yellow leaf mottling and necrosis. The four clones are 398–399 nucleotides long and are thought to be the symptomatic type based on their UUUC sequence at positions 82–85 in the CChMVd tetraloop.The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases under accession numbers AB181857–AB181860 相似文献
7.
Eliana B. Rivas Ligia M.L. Duarte M. Amélia V. Alexandre Flora M.C. Fernandes Ricardo Harakava César M. Chagas 《Journal of General Plant Pathology》2005,71(6):438-440
Badnavirus in Bougainvillea spectabilis showing virus-like symptoms was identified by the presence of bacilliform particles, measuring 125–130 × 30–40 nm in leaf-dip
preparations and by analysis of its putative open reading frame 3 sequence. The virus, tentatively named Bougainvillea bacilliform
virus (BBV), had the highest identities (up to 60%) with Spiraea yellow leaf spot virus, Gooseberry vein banding associated
virus, Taro bacilliform virus, and Citrus yellow mosaic virus. In phylogenetic analysis, BBV clustered with Badnavirus putative species. Attempts to transmit the virus to several hosts failed. This is the first report of a new Badnavirus detected in Bougainvillea. 相似文献
8.
Shigemitsu Kimura Susumu Tokumaru Kazuhiko Kuge 《Journal of General Plant Pathology》2009,75(4):322-324
Yeast-like fungi were isolated from lesions on azuki bean (cv. Shin-Kyotodainagon) seeds that had been sucked by bean bugs
in Kyoto Prefecture, Japan. On the basis of morphological and physiological characteristics and sequence data of the internal
transcribed spacer (ITS) regions including the 5.8S rDNA, these yeasts were identified as Eremothecium coryli and E. ashbyi. Pathogenicity of those yeasts was confirmed by a reinoculation test. To our knowledge, this is the first report of the occurrence
of yeast spot in azuki bean in Japan.
The nucleotide sequence data reported are available in the GeneBank/EMBL/DDBJ database as accessions AB478291–AB478309 for
E. coryli AZC1–19 and AB478310–AB478317 for E. ashbyi AZA1–8. 相似文献
9.
Tsutomu Matsumoto Hideki Yamamoto Shin-ichi Fuji Masayasu Inoue 《Journal of General Plant Pathology》2007,73(3):222-224
A novel potyvirus, tentatively named Ornithogalum virus 2 (OV-2) because only its nucleotide sequence of the coat protein gene has been revealed, was isolated for the first
time from Ornithogalum thyrsoides. OV-2 had a flexuous particle (700–740 nm in length) and was sap and aphid transmissible. The virus had a narrow host range;
of 36 test plants in 12 families, only O. thyrsoides and O. dubium were infected. Because the virus caused characteristic stripe mosaic on O. thyrsoides, we propose Ornithogalum stripe mosaic virus (OrSMV), instead of OV-2 for the proper name of the virus.
The nucleotide sequence data reported is available in the DDBJ/EMBL/GenBank databases under accession number AB271783. 相似文献
10.
Igor Koloniuk Josef Špak Karel Petrzik 《European journal of plant pathology / European Foundation for Plant Pathology》2008,122(3):447-450
The nucleotide sequence of the 3′-terminal part of the RNA1 genome segment of the M12 isolate of comovirus Turnip ringspot virus (TuRSV) was established. This isolate originated in 1989 in Moscow (Russia) from Chinese cabbage with Radish mosaic virus-like symptoms. Comparison of the M12 RNA polymerase amino acid sequence with that of Radish mosaic virus (RaMV) revealed
significant differences; these proteins are of different length and are only about 75% identical. On the other hand, the amino
acid sequence of the M12 RNA polymerase was more than 94% identical with that of TuRSV recently described in Toledo (USA).
We conclude that TuRSV occurs in Europe as well as in America and probably represents a new species of the genus Comovirus. 相似文献
11.
12.
Kazutaka Kido Rie Adachi Masaru Hasegawa Kazutaka Yano Yasufumi Hikichi Shigeharu Takeuchi Tae Atsuchi Yuichi Takikawa 《Journal of General Plant Pathology》2008,74(4):302-312
An internal fruit rot with a malodor was found in netted melons (Cucumis melo L.) in commercial greenhouses in Kochi Prefecture, Japan, in 1998, despite their healthy appearance and lack of water-soaking
or brown spots on the surface. A yellow bacterium was consistently isolated from the affected fruits. To confirm the pathogenicity
of eight representative isolates of the yellow bacterium, we stub-inoculated ovaries (immature-fruits) 5–7 days after artificial
pollination, with a pin smeared with bacteria. After the melon fruits had grown for 60 more days, an internal fruit rot resembling
the natural infection appeared, and the inoculated bacterium was reisolated. The melon isolates had properties identical with
Pantoea ananatis, such as gram-negative staining, facultative anaerobic growth, indole production, phenylalanine deaminase absence, and acid
production from melibiose, sorbitol, glycerol, and inositol. Phylogenetic analysis based on 16S rDNA sequences showed that
the melon bacterium positioned closely with known P. ananatis strains. The melon bacterium had indole acetic acid (IAA) biosynthesis genes (iaaM and iaaH) and a cytokinin biosynthesis gene (etz). The bacterium could be distinguished from the other ‘Pantoea’ group strains by rep-PCR genomic fingerprinting. From these results, the causal agent of internal fruit rot was identified
as a strain of P.ananatis [Serrano in (Philipp J Sci 36:271–305, 1928); Mergaert et al. in (Int J Syst Bacteriol 43:162–173, 1993)].
The nucleotide sequence data reported are available in the DDBJ database under accessions AB297969, AB373739, AB373740, AB373741,
AB373742, AB373743 and AB373744. 相似文献
13.
Hiroyuki UGA Yuki O. KOBAYASHI Kyoji HAGIWARA Yohachiro HONDA Toshihiro OMURA Takahide SASAYA 《Journal of General Plant Pathology》2002,68(4):378-381
The causative virus (isolate No. 4) of gentian (Gentiana spp.) mosaic, which had been identified previously as Clover yellow vein virus (C1YVV) on the basis of host range and serological reactions, was re-identified as Bean yellow mosaic virus (BYMV) on the basis of the nucleotide sequences of the gene for the coat protein (CP) and the 3′-noncoding region, as well
as the predicted amino acid sequence of CP.
Received 16 April 2002/ Accepted in revised form 19 June 2002 相似文献
14.
You-Xiu Zheng Ching-Chung Chen Yuh-Kun Chen Fuh-Jyh Jan 《European journal of plant pathology / European Foundation for Plant Pathology》2008,121(1):87-95
A putative virus-induced disease showing chlorotic spots on leaves of Phalaenopsis orchids was observed in central Taiwan. A virus culture, phalaenopsis isolate 7-2, was isolated from a diseased Phalaenopsis orchid and established in Chenopodium quinoa and Nicotiana benthamiana. The virus reacted with the monoclonal antibody (POTY) against the potyvirus group. Potyvirus-like long flexuous filament
particles around 12–15 × 750–800 nm were observed in the crude sap and purified virus preparations, and pinwheel inclusion
bodies were observed in the infected cells. The conserved region of the viral RNA was amplified using the degenerate primers
for the potyviruses and sequence analysis of the virus isolate 7-2 showed 56.6–63.1% nucleotide and 44.8–65.1% amino acid
identities with those of Bean yellow mosaic virus (BYMV), Beet mosaic virus (BtMV), Turnip mosaic virus (TuMV) and Bean common mosaic virus (BCMV). The coat protein (CP) gene of isolate 7-2 was amplified, sequenced and found to have 280 amino acids. A homology
search in GenBank indicated that the virus is a potyvirus but no highly homologous sequence was found. The virus was designated
as Phalaenopsis chlorotic spot virus (PhCSV) in early 2006. Subsequently, a potyvirus, named Basella rugose mosaic virus isolated
from malabar spinach was reported in December 2006. It was found to share 96.8% amino acid identity with the CP of PhCSV.
Back-inoculation with the isolated virus was conducted to confirm that PhCSV is the causal agent of chlorotic spot disease
of Phalaenopsis orchids in Taiwan. This is the first report of a potyvirus causing a disease on Phalaenopsis orchids. 相似文献
15.
Ramesh R. Chavan Michael N. Pearson Dan Cohen 《European journal of plant pathology / European Foundation for Plant Pathology》2009,124(2):247-259
Actinidia chinensis and A. deliciosa plants from China, showing a range of symptoms, including vein clearing, interveinal mottling, mosaics and chlorotic ring
spots, were found to contain ~300 nm rod-shaped virus particles. The virus was mechanically transmitted to several herbaceous
indicators causing systemic infections in Nicotiana benthamiana, N. clevelandii, and N. occidentalis, and local lesions in Chenopodium quinoa. Systemically- infected leaves reacted with a Tobacco mosaic virus polyclonal antibody in indirect ELISA. PCR using generic and specific Tobamovirus primers produced a 1,526 bp sequence spanning the coat protein (CP), movement protein (MP), and partial RNA replicase genes
which showed a maximum nucleotide identity (88%) with Turnip vein clearing virus and Penstemon ringspot virus. However, when the CP sequence alone was considered the highest CP sequence identity (96% nt and 98% aa) was to Ribgrass mosaic virus strain Kons 1105. The morphological, transmission, serological and molecular properties indicate that the virus is a member
of subgroup 3 of the genus Tobamovirus. 相似文献
16.
Kaoru Hanada Fumiyoshi Fukumoto Manabu Kusunoki Mitsuro Kameya-Iwaki Yuko Tanaka Toru Iwanami 《Journal of General Plant Pathology》2006,72(6):383-386
An undescribed spherical virus ca. 30 nm in diameter was isolated from gladiolus (Gladiolus spp.) plants in Japan. The virus had a moderate host range within eight families. Purified virus preparations contained two
large RNA components and one coat protein with mobility similar to Cycas necrotic stunt virus (CNSV) from cycas (Cycas revolute). The virus was serologically closely related to CNSV. Its nucleotide sequence of the coat protein gene had 89% common identity
with that of CNSV. These results indicated that the virus isolated from gladiolus is a new strain of CNSV.
The nucleotide sequence data reported are available in the DDBJ/EMBL/Gen Bank databases under the accession number AB237656. 相似文献
17.
Kentaro Okuno Tomoko Hama Minoru Takeshita Naruto Furuya Yoichi Takanami 《Journal of General Plant Pathology》2003,69(2):138-142
A potyvirus, for which the name Japanese hornwort mosaic virus (JHMV) is proposed, was isolated from Japanese hornwort plants
(Cryptotaenia japonica) with mosaic disease symptoms. The virus was used to inoculate mechanically 34 plants belonging to 33 species of 10 families.
Of these species seven from two families were infected. Faint chlorotic spots appeared on the inoculated leaves of Chenopodium quinoa and C. amaranticolor, but no systemic infection occurred in these plants. JHMV systemically infected only Umbelliferae plants; they did not infect
26 other species in eight families. JHMV was transmitted in a nonpersistent manner by aphids (Myzus persicae). The virus was a flexuous rod-shaped particle about 750 nm in length. Sequencing the nucleotides in the 3′ terminal region
of JHMV revealed that the coat protein contains 280 amino acids with a molecular mass of 32.2 kDa. The nucleotide sequence
of the coat protein of JHMV had the highest similarity with that of Zantedeschia mosaic virus (83.3%) compared to those of
other potyviruses (57.0%–64.9%). An antiserum against JHMV reacted strongly with JHMV and weakly with Potato virus Y. These results indicate that JHMV is a new potyvirus.
Received: September 9, 2002 / Accepted: November 7, 2002
RID="*"
ID="*" The nucleotide sequence determined in this work appears in the DDBJ/EMBL/GenBank nucleotide sequence databases with
the accession number AB081518 相似文献
18.
19.
Shigeharu Takeuchi Yoshifumi Shimomoto Koichi Ishikawa 《Journal of General Plant Pathology》2009,75(2):154-156
A new disease causing necrotic spots and yellowing on leaves of balsam pear (Momordica charantia) was found in Kochi Prefecture, Japan. In this study, we identified the causal pathogen as Melon yellow spot virus (MYSV)
based on morphology of virus particles, serology, and the nucleotide sequence of the nucleocapsid protein gene. This is the
first report of natural infection of balsam pear by MYSV. We propose the name spotted wilt for this new disease of balsam
pear. 相似文献