两种检测传染性造血器官坏死病(IHNV)方法的比较

传染性造血器官坏死病(IHNV)是一种危害极其严重的鱼类疾病。本实验用一步RT-PCR法和套式PCR法对IHNV的基因进行扩增,通过扩增片段的琼脂糖电泳分析,来判定病鱼是否携带IHNV。实验结果表明,通过一步法RT-PCR可扩增出IHNV的693bp片段;通过套式PCR法可扩增出IHNV的786bp片段和323bp片段。两种方法均能够检测待测样品中含有IHNV。比较发现一步RT-PCR法比套式PCR法更加快速、简便、敏感,减少了被污染机会。     

An isolate and sequence database of infectious haematopoietic necrosis virus (IHNV)

In the field of fish diseases, the amount of relevant information available is enormous. Internet‐based databases are an excellent tool for keeping track of the available knowledge in the field. Fishpathogens.eu was launched in June 2009 with the aim of collecting, storing and sorting data on fish pathogens. The first pathogen to be included was the rhabdovirus, viral haemorrhagic septicaemia virus (VHSV). Here, we present an extension of the database to also include infectious haematopoietic necrosis virus (IHNV). The database is developed, maintained and managed by the European Community Reference Laboratory for Fish Diseases and collaborators. It is available at http://www.fishpathogens.eu/ihnv .     

Inhibition of infectious haematopoietic necrosis virus in cell cultures with peptide-conjugated morpholino oligomers

Delivery of phosphorodiamidate morpholino oligomers (PMO) into fish cells in vitro and tissues in vivo was examined. Uptake was evaluated by fluorescence microscopy and flow cytometry after treating cultured cells or live rainbow trout with 3' fluorescein-tagged PMO. Arginine-rich peptide conjugated to the 5' end of the PMO markedly enhanced cellular uptake in culture by 8- to 20-fold compared with non-peptide-conjugated PMO as determined by flow cytometry. Enhanced uptake of PMO conjugated to peptide was also observed in tissues of fish treated by immersion. The efficacy of PMO as inhibitors of infectious haematopoietic necrosis virus (IHNV) replication was determined in vitro. Peptide-conjugated PMOs targeting sequences within the IHNV genomic RNA (negative polarity) or antigenomic RNA (positive polarity) significantly inhibited replication in a dose-dependent and sequence-specific manner. A PMO complementary to sequence near the 5' end of IHNV genomic RNA was the most effective, diminishing titre by 97%, as measured by plaque assay and Western blot. These data demonstrate that replication of a negative-stranded non-segmented RNA virus can be inhibited by antisense compounds that target positive polarity viral RNA, or by a compound that targets negative polarity viral RNA.     

Development of a reproducible infectious pancreatic necrosis virus challenge model for Atlantic salmon, Salmo salar L.

Atlantic salmon smolts, previously unexposed to infectious pancreatic necrosis virus (IPNV), were placed into tanks of sea water at 10 °C. After 4 weeks, 40 fish were injected intraperitoneally (i.p.) with homogenized and filter‐sterilized kidney material obtained from salmon with clinical IPN in a marine farm in Shetland. The injected fish were cohabited with 40 untreated fish. Mortalities began in the injected fish on day 7 and reached a peak of 48% on day 14. In the cohabitation group, mortalities began on day 14 and reached a peak of 70% on day 27. The IPNV in the Shetland kidney homogenate was cultured in Chinook salmon embryo (CHSE) cells and passed twice. This cultured virus was injected i.p. into fish at various doses ranging from 10 to 10⁷ TCID₅₀ fish^?1 4 weeks after seawater transfer. Challenge tanks contained 30 injected fish and 30 cohabitees. Mortality rates and levels were dose‐dependent. The highest dose used resulted in a similar mortality pattern as obtained with a similar dose of the Shetland kidney homogenate, indicating that virulence was retained after two passes in tissue culture. Even with the lowest dose, mortality reached 12% in the injected group and 23% in the cohabitees. The IPNV titres were high (10⁶?10⁹ i.u. g^?1 kidney) in fish which died during the experiment and low (<10⁵ i.u. g^?1 kidney) or undetectable in surviving fish. The cultured virus (pass 3) was used in a challenge model where the population density of fish in the tanks was high (50 injected and 50 cohabitees) or low (15 injected and 15 cohabitees). In the high stocking density tank, mortalities peaked at about 35% in the injected group and at 52% in the cohabitees. In the low stocking density tank, mortalities peaked at about 40% in the injected fish but no mortality occurred in the cohabitees. However, IPNV was detected (up to 10⁴ i.u. g^?1 kidney) in 82% of cohabitees sampled on day 30. These data suggest that lethal lateral transmission of the virus is dependent on the infectious pressure from the injected group. A further trial was conducted to investigate the effect of time post‐seawater transfer on the susceptibility of post‐smolts to IPN. Groups of fish were challenged every 2 weeks from week 0–10. Few mortalities occurred at week 0 and virus titres were high in these fish. Most survivors became carriers, some with titres >10⁶ i.u. IPNV g^?1 kidney. From 2 to 10 weeks after seawater transfer, mortalities in both injected and cohabitees were substantial with viral titres >10⁷ i.u. g^?1 kidney. Survivors had lower titres and in many virus was undetectable. Throughout the experiments, moribund fish were sampled for histology and all showed typical IPN histopathology.     

Comparison of mortality and viral load in rainbow trout (Oncorhynchus mykiss) infected with infectious pancreatic necrosis virus (IPNV) genogroups 1 and 5

Infectious pancreatic necrosis virus (IPNV) is the aetiological agent of a highly contagious disease that affects farmed salmonids. IPNV isolates have been phylogenetically classified into eight genogroups, of which two are present in Chile, genogroups 1 and 5. Here, we compare the mortality rate caused by isolates from both genogroups in rainbow trout (Oncorhynchus mykiss) fry to determine if there is an association between host susceptibility and phylogenetic characterization of IPNV. Fish were challenged by immersion with one of four isolates (two for each genogroup), and mortality curves were assessed after 30 days. Viral load was measured in all mortalities and in live fish sampled at 1, 7 and 20 days post-infection. Although mortality was low throughout the challenge, differences were found between fish infected with different isolates. Both isolates from genogroup 1 caused greater cumulative mortalities than either of the isolates from genogroup 5. When combined, the overall mortality rate of fish challenged with genogroup 1 isolates was significantly higher than those infected with genogroup 5. However, viral load was lower on trout infected with genogroup 1 isolates. These results suggest that rainbow trout are more susceptible to IPNV isolates from genogroup 1 than genogroup 5.     

Propagation of yellow grouper nervous necrosis virus (YGNNV) in a new nodavirus-susceptible cell line from yellow grouper, Epinephelus awoara (Temminck & Schlegel), brain tissue

A nodavirus was isolated from diseased yellow grouper, Epinephelus awoara , larvae cultured in southern Taiwan. The histopathology and RT–PCR results confirmed that it was a fish nodavirus; its coat protein gene sequence was similar to that of red spotted grouper nervous necrosis virus (RGNNV) and it is named yellow grouper nervous necrosis virus (YGNNV). A new nodavirus-susceptible cell line, grouper brain (GB) was established and characterized from the brain tissue of yellow grouper. The GB cells multiplied well in Leibovitz's L-15 medium supplemented with 10% foetal bovine serum at temperatures between 24 and 32 °C, and have been subcultured more than 80 times, becoming a continuous cell line. The GB cell line consists of fibroblast-like cells and some epithelioid cells. The cell line yielded titres of YGNNV up to 10^8.5 TCID₅₀ mL^–1. The GB cells effectively replicated the virus at 28 °C, which could be purified to homogeneity by caesium chloride gradient centrifugation. Electron microscopy studies showed that purified virus particles were 25–30 nm in diameter. The cytoplasm of infected cells was filled with aggregates of virus particles. These results indicate that the GB cell line is a significant tool for the study of fish nodaviruses.     

一株虹鳟源传染性胰腺坏死病病毒的分离与鉴定

为明确引起四川石棉某养殖场饲养的虹鳟患病死亡的病原体,实验对自然发病虹鳟进行大体病变观察并对其病原体进行分离,通过人工感染实验及多重RT-PCR鉴定确定病原体WZ160509,并对病原体的主要结构蛋白VP2进行扩增分析,同时对病变组织进行组织病理学观察。结果显示,患病鱼主要临床症状表现为体表发黑,腹部膨大,挤压腹部可见肛门喷射淡黄色黏液便;剖检可见肝脏、肾脏苍白;肠道内无食物,内积黄色黏液。将患病虹鳟组织匀浆液无菌接种虹鳟鱼生殖腺细胞系(rainbow trout gonad cell line,RTG-2)细胞,盲传3代均出现典型的细胞病变。人工感染实验显示死亡率高达90%,并出现与自然患病鱼相同的症状。多重RT-PCR检测发现,自然发病鱼、人工感染鱼以及病变RTG-2细胞均为传染性胰腺坏死病病毒(infectious pancreatic necrosis virus,IPNV)阳性,其主要结构蛋白VP2基因与美国分离株基因组1型聚为一支,且同源性分析表明,WZ160509-VP2与IPNV-VP2(AY026345)的同源性最高,序列一致性为95.8%。组织病理学观察显示,患病鱼胰腺细胞空泡变性,坏死;肝细胞空泡变性,坏死;肾小球轻度炎症,毛细血管通透性增加,肾小囊腔内有红色絮状蛋白类物质渗出,肾小管上皮细胞空泡变性。研究表明,从该养殖场患病虹鳟中分离到的病毒为IPNV。     

传染性造血组织坏死病毒核衣壳蛋白的原核表达及抗原性分析

应用RT-PCR方法扩增了长度为1176 bp的IHNV-ZYX株编码核衣壳(N)蛋白基因,将N基因克隆至原核表达载体pET30b,并在大肠杆菌Rosetta(DE3)中得到了表达.通过SDS-PAGE分析表明,重组菌诱导后得到了预期大小约48 KD的N蛋白,与理论值相符;提取N蛋白的包涵体,并制备抗血清.间接ELIS...     

First detection and isolation of infectious haematopoietic necrosis virus from farmed rainbow trout in Nyeri County,Kenya

Infectious haematopoietic necrosis virus (IHNV) is the causative agent of infectious haematopoietic necrosis, a disease of salmonid responsible for great economic losses. The disease occurs in most parts of the world where rainbow trout is reared but has not been previously reported in Kenya. In this study, rainbow trout fry and growers from two farms in Nyeri County were screened for IHNV. Whole fry (n = 4 from each farm) and kidney samples from growers (n = 15 and n = 6 from the two farms, respectively) were collected and preserved for cell culture examination or PCR analysis. Screening of samples was done by PCR followed by sequencing of the glycoprotein gene of the virus. Demonstration of the virus was done by propagation in EPC cells followed by the indirect fluorescence antibody test (IFAT). The results revealed the presence of IHNV at low prevalence of 0.1 and 0.4 for the two farms. The virus was confirmed both by IFAT and by partial sequencing of the G gene. Phylogenetic analysis revealed that the Kenyan isolates were identical to those of the J genogroup found mostly in Asia. The findings have implications for biosecurity measures and import regulations for the Kenyan rainbow trout industry.     

A single-step multiplex PCR for simultaneous detection of white spot syndrome virus and infectious hypodermal and haematopoietic necrosis virus in penaeid shrimp

White spot syndrome virus (WSSV) and infectious hypodermal and haematopoietic necrosis virus (IHHNV) are the major viral pathogens of penaeid shrimp worldwide (Lightner & Redman 1998). Litopenaeus vannamei was introduced into China from the Americas, and quickly became widely cultured. Following its introduction, both IHHNV and WSSV have become important pathogens of cultured penaeid shrimp and have had a huge impact on the culture industry in China in recent years.     

Design and validation of a RT‐qPCR procedure for diagnosis and quantification of most types of infectious pancreatic necrosis virus using a single pair of degenerated primers

Infectious pancreatic necrosis virus (IPNV) is an important virus which affects the salmonid aquaculture industry worldwide; therefore, it is important to develop rapid and reliable methods of diagnosis to detect the disease at early stages. Nowadays, RT‐qPCR is replacing other methods because it provides additional information on the viral load, which is important to have a better understanding of the virus replication level and of the stage of the infection and its risk level. The main problem stems from the high diversity of this virus, which can compromise the reliability of the diagnosis. In this study, we have designed an RT‐qPCR procedure for diagnosis and quantification of IPNV based on a single pair of primers targeted to segment B. The procedure has been validated, in vitro and in vivo, testing two different types of standards against seven reference strains and 23 field isolates from different types. The procedure is reliable for the detection of any type, with a detection limit of 31 TCID₅₀ mL^?1, 50 pfu mL^?1 or 66 RNA copies mL^?1, depending on the standard. All the standard curves showed high reliability (R² > 0.95). The results support the high reliability of this new procedure for the diagnosis and quantification of IPNV.     

传染性造血器官坏死病毒-Sn1203株的基因型及糖蛋白的生物信息学分析

利用鲤(Cyprinus carpio)上皮细胞(epitheliaoma papulosum cyprini, EPC)培养传染性造血器官坏死病毒- Sn1203分离株(IHNV-Sn1203), 根据GenBank中IHNV G蛋白基因开放阅读框(open reading frame, ORF)的序列设计引物(GenBank序列编号AB288207), 采用RT-PCR的方法克隆得到IHNV-Sn1203株G蛋白全长ORF, 克隆至表达载体pET27b(+)中, 构建了pET27-G重组质粒, 并进行了测序分析。生物信息学分析结果显示, IHNV-Sn1203株G蛋白基因序列长度为1 527 bp, 与韩国株具有最高的核酸同源性(96.86%)和氨基酸同源性(97.05%)。该基因编码508个氨基酸残基, 推导分子量约为56.55 kD, 等电点为6.15; 氨基酸序列分析表明, G蛋白富含丝氨酸、苏氨酸和酪氨酸, 存在28个潜在的磷酸化位点; 存在4个潜在的N-糖基化位点和7个潜在的O-糖基化位点; G蛋白N端含有20个氨基酸的信号肽; 亲水性大于输水性; 位于483~508位氨基酸存在一跨膜区; 抗原表位预测显示抗原性良好; 系统进化树分析显示, IHNV-Sn1203株与日本株和韩国株聚为一簇, 都属于JRt基因型。

     

用逆转录多聚酶链式反应从凡纳对虾中检出传染性皮下组织和造血器官坏死病毒

传染性皮下组织和造血器官坏死病毒 (ＩＨＨＮＶ) ,是一种细小病毒 ,它能感染所有起源于中胚层和外胚层的对虾组织细胞[1] 。在许多养殖对虾的国家都有ＩＨＨＮＶ ,特别是中美洲国家和地区[2 ] 的对虾养殖业深受其害。随着各国间对虾贸易的急剧增长 ,ＩＨＨＮＶ地理分布范围日益广泛 ,迄今为止 ,已扩散到中国台湾、新加坡、马来西亚、泰国、印度尼西亚、澳大利亚、菲律宾、厄瓜多尔、秘鲁等国家和地区[2 -4] 。红额角对虾 (Ｐｅｎａｅｕｓｓｔｙｌｉｒｏｓｔｒｉｓ)、斑节对虾 (Ｐ .ｍｏｎｏｄｏｎ)、短沟对虾 (Ｐ .ｓｅｍｉｓｕｌｃａｔｕ…     

Virulence of a chimeric recombinant infectious haematopoietic necrosis virus expressing the spring viraemia of carp virus glycoprotein in salmonid and cyprinid fish

Infectious haematopoietic necrosis virus (IHNV) and spring viraemia of carp virus (SVCV) are both rhabdoviruses of fish, listed as notifiable disease agents by the World Organization for Animal Health. Recombinant rhabdoviruses with heterologous gene substitutions have been engineered to study genetic determinants and assess the potential of these recombinant viruses for vaccine development. A recombinant IHNV (rIHNV), containing the full‐length genome of a European IHNV strain, was modified by deleting the glycoprotein (G) gene and replacing it with a European SVCV G‐gene to make the rIHNV‐Gsvcv. The chimeric rIHNV‐Gsvcv level of virulence in rainbow trout, common carp and koi was assessed, and its ability to induce a protective immune response in surviving koi against wild‐type SVCV infection was tested. The rIHNV‐Gsvcv infection of trout led to high mortality, ranging from 78% to 92.5%, after immersion. In contrast, no deaths occurred in juvenile common carp after infection with rIHNV‐Gsvcv by either immersion or intraperitoneal (IP) injection. Similarly, koi infected with rIHNV‐Gsvcv via IP injection had little to no mortality (≤9%). Koi that survived initial infection with a high dose of recombinant virus rIHNV‐Gsvcv were protected against a virulent SVCV challenge resulting in a high relative per cent survival of 82.5%.