首页 | 官方网站   微博 | 高级检索  
     


Genome-wide analysis of the SCPL gene family in grape(Vitis vinifera L.)
Authors:WANG Xi-cheng  WU Wei-min  ZHOU Bei-bei  WANG Zhuang-wei  QIAN Ya-ming  WANG Bo  YAN Li-chun
Affiliation:Institute of Pomology, Jiangsu Academy of Agricultural Sciences/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing 210014, P.R.China
Abstract:Serine carboxypeptidase-like(SCPL) proteins are a group of acyltransferase enzymes that have important roles in plant growth, development, and stress responses. Although SCPL proteins have been studied in many plants, the biological functions of SCPL genes in grape are still unknown. In this study, 59 putative SCPL proteins were identified from the grape genome. A bioinformatics analysis, including chromosomal locations, exon/intron structures, phylogeny, ciselements, and conserved motifs, was performed for the gene family. The phylogenetic analysis revealed that VvSCPL proteins could be classified into three groups, with the gene motifs in each group showing high similarity levels. The number of exons in the VvSCPL genes ranged from 1 to 19, suggesting significant variations among grape SCPL genes. The expression of the VvSCPL genes, as assessed by RNA sequencing(RNA-seq) and quantitative real-time PCR, showed that most VvSCPL genes responded to drought-and waterlogging-stress treatments, which indicated their roles in abiotic stress responses. The results provide useful information for further study of SCPL genes in grape.
Keywords:serine carboxypeptidase-like (SCPL) protein  grape  phylogenetic relationships  abiotic stress  gene expression
本文献已被 CNKI ScienceDirect 等数据库收录!
点击此处可从《农业科学学报(英文版)》浏览原始摘要信息
点击此处可从《农业科学学报(英文版)》下载全文
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司    京ICP备09084417号-23

京公网安备 11010802026262号