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麻楝ISSR-PCR反应体系的建立及优化
引用本文:武冲,仲崇禄,张勇,姜清彬,陈羽,陈珍.麻楝ISSR-PCR反应体系的建立及优化[J].浙江农林大学学报,2013,30(4):620-626.
作者姓名:武冲  仲崇禄  张勇  姜清彬  陈羽  陈珍
作者单位:1.中国林业科学研究院 热带林业研究所,广东 广州 510520
摘    要:模板DNA、引物、三磷酸碱基脱氧核苷酸(dNTPs),镁离子(Mg2+)浓度、Taq DNA聚合酶的用量以及退火温度是影响简单序列重复区间扩增?鄄聚合酶链式反应(ISSR-PCR)的主要因素。以麻楝Chukrasia tabularis叶片基因组DNA为试验材料,系统地测试这6个因素对麻楝ISSR-PCR反应结果的影响。结果表明:最优的反应体系为20 L反应体系中含30 ng模板DNA,1.00 molL-1随机引物,0.15 mmolL-1dNTPs,2.50 mmolL-1 Mg2+,2.50 16.67 nkat Taq DNA聚合酶。最佳退火温度为56 ℃,ISSR-PCR反应程序为94 ℃预变性5.0 min,94 ℃变性45 s,56 ℃退火45 s,72 ℃延伸1.5 min,40个循环;72 ℃再延伸7.0 min,4 ℃保存。应用优化的ISSR-PCR反应体系对24份麻楝个体材料进行扩增,均能扩增出丰富稳定的条带。图8表1参27

关 键 词:林木育种学    麻楝    ISSR    PCR条件    优化
收稿时间:2012-06-19

Establishment and optimization of an ISSR-PCR system for Chukrasia tabularis
WU Chong,ZHONG Chonglu,ZHANG Yong,JIANG Qingbin,CHEN Yu,CHEN Zhen.Establishment and optimization of an ISSR-PCR system for Chukrasia tabularis[J].Journal of Zhejiang A&F University,2013,30(4):620-626.
Authors:WU Chong  ZHONG Chonglu  ZHANG Yong  JIANG Qingbin  CHEN Yu  CHEN Zhen
Affiliation:1.Research Institute of Tropical Forestry,Chinese Academy of Forestry,Guangzhou 510520,Guangdong,China
Abstract:The genomic DNA from twenty-four varieties of germplasm material for Chukrasia tabularis leaves was systematically analyzed for template DNA,primer,dNTPs,Mg2+ concentration,dosage of Taq DNA polymerase,and annealing temperature with an inter simple sequence repeat(ISSR)-polymerase chain reaction(PCR). Results showed that the optimal reaction system for the ISSR was a 20 L system containing 30 ng template DNA,1.00 molL-1 random primers, 0.15 mmolL-1 dNTPs,2.50 mmolL-1 Mg2+, and 2.50 16.67 nkat Taq DNA polymerase. The optimal annealing temperature was 56 ℃ with the PCR procedure pre-denaturized at 94 ℃ for 5.0 min, denaturized at 94 ℃ for 45 s, and annealed at 56 ℃ for 45 s with an extension at 72 ℃ for 1.5 min,a reaction of 40 cycles,and re-extension at 72 ℃ for 7 min. These products were then stored at 4 ℃. Results indicated that stable bands could be amplified. [Ch,8 fig. 1 tab. 27 ref.]
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